; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27001 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27001
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionExonuclease domain-containing protein
Genome locationCarg_Chr10:9652243..9654036
RNA-Seq ExpressionCarg27001
SyntenyCarg27001
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590475.1 Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.7e-185100Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

XP_022961373.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata]1.0e-18499.7Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFR YNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]6.9e-18197.89Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITA MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM+TKAGRKAKT+PSSKPSNIRNEILEESVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEK GTQKLQCCNIQETI+KDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKK
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKK
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKK

XP_023515555.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]1.9e-18398.8Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQ+KRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCT+S
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEKNGTQKLQCCNIQETI KDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI KISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

XP_038878496.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]3.5e-16188.02Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MI APMCFSILR PKFGVPTLANLWRENFHPLNRN  HSSW+DQLGFRIYNLEGGQ+KRW RKSM+TKAGRKAK +PSSKP+NIRNEILEES+STSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEK+ TQKLQ C+IQ+ I+K+KELARPVTVITFDIETTGFSR LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGIT+ MVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL
        IPILLQF++SR  QKPDGYVLLVAHNARTFDVPFLLKEFSRCS DIP NW FFD+I LARQLMKS+DSKITKISLQALREYY+I LVGSAHRAMSDVR+L
Subjt:  IPILLQFIKSR--QKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTL

Query:  SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        SLILQRLTF+LKLGI DLIERSFT SDLINKKKN
Subjt:  SLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein3.0e-14278.83Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS++TKAG KAKT+PSSKP+NIRNEIL+ES+  SCTV+INKSE
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILL
        K+ TQKLQ C+IQ TI+K KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILL

Query:  QFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL
        QF+KSRQKP GYVLLVAHNARTFDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL

Query:  TFDLKLGIPDLIERSFTTSDLINKKK
        TFDLKL I DL+ER+FT  DLINKKK
Subjt:  TFDLKLGIPDLIERSFTTSDLINKKK

A0A0N9LRH7 Exonuclease DPD16.8e-14278.83Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS++TKAG KAKT+PSSKP+NIRNEIL+ESV  SCTV+INKSE
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILL
        K+ TQKLQ C+IQ TI+K KE A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI++RMV  P VP M+ELIPI+L
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILL

Query:  QFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL
        QF+KSRQKP GYVLLVAHNARTFDVPFLL EFSR SVDIPLNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Subjt:  QFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL

Query:  TFDLKLGIPDLIERSFTTSDLINKKK
        TFDLKL I DL+ER+FT  DLINKKK
Subjt:  TFDLKLGIPDLIERSFTTSDLINKKK

A0A6J1C1V8 exonuclease DPD1, chloroplastic/mitochondrial4.8e-15684.34Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MIT PMCFSILRVPKFGV TLAN WR NFHPLNRNYGHSSWYDQL FRIYNLEGGQ+KRWTRKS++TKAGRK K +PSSKPS+IRNEILE SVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INK+EK+ TQKLQ C+IQ+T  K KEL RPVTVI FDIETTGFSR+ DRIVEIA QDLSGGENSTFQTLINPECYIPN++VHGITSRMVSRPDVPRMK+L
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQF+ SRQKPDGY+LLVAHNARTFDVPFLL EFSRCS DIP +WLF DN++LARQLM S+DSK++KISLQALREYY+IPLVGSAHRAMSDV +LSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        ILQRLTFDLKL IPDLIERSFT SDLI K K+
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial5.0e-18599.7Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFR YNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial3.3e-18197.89Show/hide
Query:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS
        MITA MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM+TKAGRKAKT+PSSKPSNIRNEILEESVSTSCTVS
Subjt:  MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVS

Query:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
        INKSEK GTQKLQCCNIQETI+KDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL
Subjt:  IPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL

Query:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKK
        ILQRLTFDLKLGIPDLIERSFTTSDLINKKK
Subjt:  ILQRLTFDLKLGIPDLIERSFTTSDLINKKK

SwissProt top hitse value%identityAlignment
Q5HPS7 DNA polymerase III PolC-type3.3e-0825.73Show/hide
Query:  RPVTVITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNA
        +  T + FD+ETTG S + D+I+E+A   +  GE    F+   NP   +   +++   IT  M++  D P ++E++    +++       G  + VAHNA
Subjt:  RPVTVITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNA

Query:  RTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLK-LGIPDLIERSFTTS
         +FD+ F+   + R       N      ++   +L ++ +++  K  L  L + Y + L    HRA+ D    + I  ++   +K LG+ + +E      
Subjt:  RTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLK-LGIPDLIERSFTTS

Query:  DLINKK
          INKK
Subjt:  DLINKK

Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial1.8e-6243.34Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++ST       T   S+ SN ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL
        ++ T+     N+Q+ + +DK+L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI + MV RP+VPRM+ELIPI 
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
        L++++SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Query:  RLTFDLKLGIPDLIERSFTTSDL
        +LT DLKL + DL+ R  T SD+
Subjt:  RLTFDLKLGIPDLIERSFTTSDL

Q895K2 DNA polymerase III PolC-type2.3e-1432.5Show/hide
Query:  ITFDIETTGFSRELDRIVEI-ALQDLSGGENSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV
        + FDIETTGFS + D+I+EI A++   G     + T +NPE  IP  ++   GI   MV   D P+++E++P  + FI+         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRELDRIVEI-ALQDLSGGENSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLK----LGIPDLIERSFTTSDL
         F+ K      +       F + IL    L K    ++ +  L  + ++  IPL+ + HRA+ D +T   IL +   DLK    + +  L E  F   D+
Subjt:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLK----LGIPDLIERSFTTSDL

Q8RA32 DNA polymerase III PolC-type1.6e-1030.16Show/hide
Query:  ITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAV--VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV
        + FDIETTG S   D I+EI    +   +   TF+T +NP+  I + +  + GI   MV   D P ++E++P  L+F K         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAV--VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVR-TLSLILQRLTFDLKLGIPDLIE
         F+  +  +  + +    L  D + L+R L +     +    L  L E++ + L+   HRA+ D + T  + ++ L    ++GI  + E
Subjt:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVR-TLSLILQRLTFDLKLGIPDLIE

Q8XJR3 DNA polymerase III PolC-type7.0e-1132.95Show/hide
Query:  ITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV
        + FDIETTGFS + D+I+EI    L  GE   +F T ++P+  IP  +     IT  MV+    P + E++P  ++F+       G  +LVAHNA  FDV
Subjt:  ITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
         F+ K      +   L     D + LAR L       + K+ L  + ++  I L  + HRA+ D +  + IL+
Subjt:  PFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-6343.34Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++ST       T   S+ SN ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL
        ++ T+     N+Q+ + +DK+L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI + MV RP+VPRM+ELIPI 
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
        L++++SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Query:  RLTFDLKLGIPDLIERSFTTSDL
        +LT DLKL + DL+ R  T SD+
Subjt:  RLTFDLKLGIPDLIERSFTTSDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-6343.34Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++ST       T   S+ SN ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL
        ++ T+     N+Q+ + +DK+L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI + MV RP+VPRM+ELIPI 
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
        L++++SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Query:  RLTFDLKLGIPDLIERSFTTSDL
        +LT DLKL + DL+ R  T SD+
Subjt:  RLTFDLKLGIPDLIERSFTTSDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-6343.34Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++ST       T   S+ SN ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL
        ++ T+     N+Q+ + +DK+L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI + MV RP+VPRM+ELIPI 
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
        L++++SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Query:  RLTFDLKLGIPDLIERSFTTSDL
        +LT DLKL + DL+ R  T SD+
Subjt:  RLTFDLKLGIPDLIERSFTTSDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-6343.34Show/hide
Query:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE
        MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++ST       T   S+ SN ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSE

Query:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL
        ++ T+     N+Q+ + +DK+L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI + MV RP+VPRM+ELIPI 
Subjt:  KNGTQKLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ
        L++++SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ

Query:  RLTFDLKLGIPDLIERSFTTSDL
        +LT DLKL + DL+ R  T SD+
Subjt:  RLTFDLKLGIPDLIERSFTTSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACAGCTCCGATGTGCTTCTCAATCTTGCGAGTTCCCAAATTTGGAGTCCCCACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGG
TCATAGTTCTTGGTATGATCAGCTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGGACAAGAGATGGACCAGAAAATCTATGTCCACAAAAGCAGGGAGGAAAGCAA
AAACTGACCCGAGCAGTAAACCGAGCAATATCAGGAATGAAATCTTAGAGGAATCGGTTTCAACAAGCTGTACAGTTAGCATCAATAAGTCTGAGAAAAATGGAACTCAG
AAGCTTCAATGTTGTAATATTCAAGAAACGATTGTTAAGGACAAGGAATTGGCTCGCCCGGTGACGGTTATAACCTTCGACATCGAAACAACAGGTTTTAGTCGAGAGCT
CGACAGAATAGTGGAAATTGCACTTCAAGATCTCTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAACCCAGAATGCTATATTCCAAATGCAGTTGTACATGGCA
TTACAAGCCGTATGGTCAGTCGACCCGACGTTCCAAGGATGAAGGAACTTATTCCAATCTTATTACAGTTTATCAAAAGCCGTCAGAAACCTGATGGATATGTATTATTG
GTAGCTCATAATGCTCGTACATTCGACGTGCCCTTTTTACTCAAGGAGTTCAGCCGTTGCTCGGTCGACATTCCTCTAAATTGGCTATTTTTCGATAACATTCTTTTAGC
CCGTCAGTTGATGAAATCCACAGATTCGAAGATTACGAAAATTTCGTTGCAAGCTCTTCGTGAGTATTACAATATTCCATTGGTGGGTTCAGCTCACCGTGCAATGTCGG
ACGTGAGGACATTGTCGCTGATTCTTCAGCGGCTTACTTTCGACCTCAAGCTAGGTATTCCTGATCTCATTGAAAGATCTTTTACTACTTCTGATCTGATTAATAAGAAG
AAGAACTAG
mRNA sequenceShow/hide mRNA sequence
TTTAAATTTCTTTGTCCTTCACGTAAGTTGTAACTTGTTTCTTCCTAAGATCATTTGGGGCTTTGAACTCTGTTATTTCGTTCCTTATTTGATAATCAATCCGGTCTTTT
ACCTTCTTTGTTACCCGATTATCTACAGGTTGAAGACAACTGCTTCCAATGCAGGGGTTTTCTGTGTAGTTTTCCTCTTGTTGTGTTGTGATTTCAAATGATAACAGCTC
CGATGTGCTTCTCAATCTTGCGAGTTCCCAAATTTGGAGTCCCCACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGG
TATGATCAGCTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGGACAAGAGATGGACCAGAAAATCTATGTCCACAAAAGCAGGGAGGAAAGCAAAAACTGACCCGAG
CAGTAAACCGAGCAATATCAGGAATGAAATCTTAGAGGAATCGGTTTCAACAAGCTGTACAGTTAGCATCAATAAGTCTGAGAAAAATGGAACTCAGAAGCTTCAATGTT
GTAATATTCAAGAAACGATTGTTAAGGACAAGGAATTGGCTCGCCCGGTGACGGTTATAACCTTCGACATCGAAACAACAGGTTTTAGTCGAGAGCTCGACAGAATAGTG
GAAATTGCACTTCAAGATCTCTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAACCCAGAATGCTATATTCCAAATGCAGTTGTACATGGCATTACAAGCCGTAT
GGTCAGTCGACCCGACGTTCCAAGGATGAAGGAACTTATTCCAATCTTATTACAGTTTATCAAAAGCCGTCAGAAACCTGATGGATATGTATTATTGGTAGCTCATAATG
CTCGTACATTCGACGTGCCCTTTTTACTCAAGGAGTTCAGCCGTTGCTCGGTCGACATTCCTCTAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAGTTGATG
AAATCCACAGATTCGAAGATTACGAAAATTTCGTTGCAAGCTCTTCGTGAGTATTACAATATTCCATTGGTGGGTTCAGCTCACCGTGCAATGTCGGACGTGAGGACATT
GTCGCTGATTCTTCAGCGGCTTACTTTCGACCTCAAGCTAGGTATTCCTGATCTCATTGAAAGATCTTTTACTACTTCTGATCTGATTAATAAGAAGAAGAACTAGTGGG
TTAAGTTATATGCAGAAATGAATCATAAGTTAGTGATGAAGCTGTGCTTTTGTTGTAATGTTATTTACTAATTGTAACTTCAGTTCATTCTTATTACCAAAATGTTGGGG
CCATTTTTATTTATGGTCAACAGATTTGTCTTGATCTCCATGTTCTTCAAGAACTAATGCCTGAATTGGATTATCATGACAAATAAAATCTAGTTTTGTTTTAGGAGTTG
TCTATGATGAACAGATGAAAAGAGGATCCTTGTTTTGTCTTGATGTTGTTGGGAATGGCTGAATTGAACTACTTTTTAAGGTTGTTGTGTCCCGGAATTATCTTAGGCCG
TGTTTTTTTATAACGACCCAGATCCACCGCTAGTAGATATTGTTCTCTTTGGGCTTTTCCT
Protein sequenceShow/hide protein sequence
MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQ
KLQCCNIQETIVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLL
VAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLKLGIPDLIERSFTTSDLINKK
KN