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Carg27044 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27044
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCOX assembly mitochondrial protein
Genome locationCarg_Chr18:4046343..4046627
RNA-Seq ExpressionCarg27044
SyntenyCarg27044
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573459.1 hypothetical protein SDJN03_27346, partial [Cucurbita argyrosperma subsp. sororia]1.3e-47100Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

XP_004145445.1 uncharacterized protein LOC101219184 [Cucumis sativus]7.0e-3881.72Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ
        M+P G++P+GGDGGC+RLE+ALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAEAVRTLCSSGGTALKRSQCE+AKFS S CLSSLQ
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ

XP_022955041.1 uncharacterized protein LOC111457119 [Cucurbita moschata]3.7e-4798.94Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

XP_022994930.1 uncharacterized protein LOC111490507 [Cucurbita maxima]8.2e-4797.87Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

XP_023542217.1 uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo]2.6e-4596.81Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

TrEMBL top hitse value%identityAlignment
A0A0A0LYC1 Uncharacterized protein3.4e-3881.72Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ
        M+P G++P+GGDGGC+RLE+ALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAEAVRTLCSSGGTALKRSQCE+AKFS S CLSSLQ
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ

A0A5D3CLT3 Uncharacterized protein4.1e-3679.57Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ
        M+P G++P+ GD GCERLE+ALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+E EAVRTLCSSGGTALKRSQCE+AKFS S CLSSLQ
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ

A0A6J1CN74 uncharacterized protein LOC1110126701.1e-3680.21Show/hide
Query:  MVPTGKAPI--GGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        M+PTG+API  GG GGCERLE+ALRDCH+R+P+GPARRS C HLNRS AECLVAT CPNEAEAVRTLCS+ GTALKRSQC++AKFS S CLSSLQL
Subjt:  MVPTGKAPI--GGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

A0A6J1GSM0 uncharacterized protein LOC1114571191.8e-4798.94Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

A0A6J1K2P5 uncharacterized protein LOC1114905074.0e-4797.87Show/hide
Query:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL
        MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Subjt:  MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31175.1 unknown protein4.8e-2970.89Show/hide
Query:  CERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ
        C+RLE+AL  CH+R+PEGPARRSGC HLN++FAEC+VA  CP E+EAVR+LCSSGGT+LKR QCE A+ S SLCLS  Q
Subjt:  CERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGAAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTC
GGGCTGCTGGCACCTGAACCGATCTTTTGCGGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAGGCGGAGGCGGTGCGAACTCTCTGCTCCAGCGGCGGAACCGCTCTGA
AGAGATCGCAATGCGAGGAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGAAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTC
GGGCTGCTGGCACCTGAACCGATCTTTTGCGGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAGGCGGAGGCGGTGCGAACTCTCTGCTCCAGCGGCGGAACCGCTCTGA
AGAGATCGCAATGCGAGGAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA
Protein sequenceShow/hide protein sequence
MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL