; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27049 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27049
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein 24 isoform X6
Genome locationCarg_Chr09:9914150..9919389
RNA-Seq ExpressionCarg27049
SyntenyCarg27049
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025125.1 putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-127100Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFP
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFP
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFP

Query:  SLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHY
        SLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHY
Subjt:  SLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHY

Query:  AAPPMSLPPTPPTLPSVFFAIPQA
        AAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  AAPPMSLPPTPPTLPSVFFAIPQA

XP_022930180.1 RNA-binding protein 38 isoform X2 [Cucurbita moschata]1.7e-9569.31Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP
                 W        R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGP
Subjt:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP

Query:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

XP_022930183.1 RNA-binding protein 38 isoform X5 [Cucurbita moschata]6.9e-9269.89Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  ----DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAA
                R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGGILSGAAAA
Subjt:  ----DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAA

Query:  AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS-VFFAIP
        AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS V  A+P
Subjt:  AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS-VFFAIP

XP_022930184.1 RNA-binding protein 24 isoform X6 [Cucurbita moschata]4.6e-9670.92Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA
                  R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGGILSGAA
Subjt:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

XP_023535743.1 RNA-binding protein 38-like isoform X2 [Cucurbita pepo subsp. pepo]3.0e-9569.44Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSN+ASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  --------DWI----WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGG
                 W      R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGG
Subjt:  --------DWI----WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGG

Query:  ILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        ILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  ILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

TrEMBL top hitse value%identityAlignment
A0A6J1EQU8 RNA-binding protein 24 isoform X62.2e-9670.92Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA
                  R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGGILSGAA
Subjt:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

A0A6J1EW94 RNA-binding protein 38 isoform X28.5e-9669.31Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP
                 W        R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGP
Subjt:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP

Query:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

A0A6J1ID09 RNA-binding protein 38 isoform X28.5e-9669.31Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP
                 W        R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGP
Subjt:  --------DWI------WRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGP

Query:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  GGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

A0A6J1IF55 RNA-binding protein 38 isoform X53.3e-9269.89Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  ----DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAA
                R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGGILSGAAAA
Subjt:  ----DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAA

Query:  AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS-VFFAIP
        AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS V  A+P
Subjt:  AAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPS-VFFAIP

A0A6J1IGH5 RNA-binding protein 24 isoform X62.2e-9670.92Show/hide
Query:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------
        MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID                  
Subjt:  MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID------------------

Query:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA
                  R   +  SF T F                                  P   YP         SYYNVYGGATAQYPMYGTGPGGILSGAA
Subjt:  ------DWIWRECWLSFSFNTNF----------------------------------PSLCYPPRDPLQSLWSYYNVYGGATAQYPMYGTGPGGILSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

SwissProt top hitse value%identityAlignment
Q5ZMA3 RNA-binding protein 242.8e-1961.97Show/hide
Query:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID
        DTTYTK+FVGGL + T   +++ YFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+ID
Subjt:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID

Q62176 RNA-binding protein 382.1e-1957.5Show/hide
Query:  PSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID
        PS M     DTT+TK+FVGGL + T   +++ YFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+ID
Subjt:  PSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID

Q6GQD3 RNA-binding protein 24-A2.8e-1961.97Show/hide
Query:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID
        DTTYTK+FVGGL + T   +++ YFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+ID
Subjt:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID

Q9I8B3 RNA-binding protein 24-B2.8e-1961.97Show/hide
Query:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID
        DTTYTK+FVGGL + T   +++ YFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+ID
Subjt:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID

Q9M1S3 Probable RNA-binding protein ARP17.0e-2360.49Show/hide
Query:  TPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID
        T +N+   FGDT  TKVFVGGLAW+T K+ M ++F ++GDILEAV+I+DK T RSKGYGFVTF++  AA RAC D+ P+I+
Subjt:  TPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVID

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3140.46Show/hide
Query:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------
        GDTTYTKVFVGGLAWET K+TMK +FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVID         S     + PS         
Subjt:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------

Query:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG
                        PP  P    +++Y                      N+YG  G T+  QY +YG     GG L+ AAA+A  FYP        GG
Subjt:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG

Query:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSL-------PPTPPTLP
        G  G      Q  Y     HHL  Y+          P HY+ P  S+       P  PP +P
Subjt:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSL-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-3240.53Show/hide
Query:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------
        GDTTYTKVFVGGLAWET K+TMK +FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVID         S     + PS         
Subjt:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------

Query:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG
                        PP  P    +++Y                      N+YG  G T+  QY +YG     GG L+ AAA+A  FYP        GG
Subjt:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG

Query:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
        G  G      Q  Y     HHL  Y+          P HY+ P  S       +  V F +PQA
Subjt:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-3141.18Show/hide
Query:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------
        GDTTYTKVFVGGLAWET K+TMK +FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVID         S     + PS         
Subjt:  GDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSL--------

Query:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG
                        PP  P    +++Y                      N+YG  G T+  QY +YG     GG L+ AAA+A  FYP        GG
Subjt:  --------------CYPPRDPLQSLWSYY----------------------NVYG--GATA--QYPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGG

Query:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLP
        G  G      Q  Y     HHL  Y+    S PT   Q  +   +S   T  +LP
Subjt:  GANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLP

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-4544.83Show/hide
Query:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWI------------------------WR
        DTT+TKVFVGGLAWET K +++NYFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVID                            R
Subjt:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWI------------------------WR

Query:  ECWLSFSFNTNFPSLCYPPRDPL-----------------------QSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANG
           ++  F T+F +       PL                           SYYNVYGGATAQ+PMYG+GP  +   AAA AA FYPY QF EG+G     
Subjt:  ECWLSFSFNTNFPSLCYPPRDPL-----------------------QSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANG

Query:  FTGGSGQQGYG-VQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
                GY  + YP+H+  YSA   + P     H+   P+SL P+ P +PSV FA+PQA
Subjt:  FTGGSGQQGYG-VQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-4545Show/hide
Query:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWI------------------------WR
        DTT+TKVFVGGLAWET K +++NYFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVID                            R
Subjt:  DTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWI------------------------WR

Query:  ECWLSFSFNTNFPSLCYPPRDPL----------------------QSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGF
           ++  F T+F +       PL                          SYYNVYGGATAQ+PMYG+GP  +   AAA AA FYPY QF EG+G      
Subjt:  ECWLSFSFNTNFPSLCYPPRDPL----------------------QSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGF

Query:  TGGSGQQGYG-VQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA
               GY  + YP+H+  YSA   + P     H+   P+SL P+ P +PSV FA+PQA
Subjt:  TGGSGQQGYG-VQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFAIPQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATCTAACATGGCAAGCCAATTTGGTGATACCACGTACACCAAGGTTTTCGTGGGTGGCTTGGCTTGGGAGACCCAAAAAGACACCATGAAGAATTACTTTGA
GCAATTTGGTGATATCTTGGAAGCTGTTGTTATTACCGACAAGGCCACCGGACGATCCAAAGGCTATGGATTTGTTACTTTTCGGGAACCCGACGCTGCCATGAGAGCTT
GTGTCGATGCGGCGCCGGTCATCGATGACTGGATTTGGAGGGAATGTTGGCTCAGCTTTTCATTCAACACCAACTTTCCCTCATTATGCTATCCACCAAGGGATCCCTTA
CAATCTCTATGGAGCTATTACAATGTGTACGGCGGAGCAACTGCACAGTACCCCATGTACGGCACCGGTCCCGGCGGCATATTGAGTGGAGCAGCGGCGGCCGCAGCCGC
ATTCTACCCTTATTTCCAATTCGGGGAAGGAAGCGGCGGCGGAGCTAATGGCTTCACCGGCGGTTCCGGGCAGCAGGGGTATGGCGTTCAGTACCCTCACCACCTGTTGC
AGTACTCGGCGGCCCTTAATTCAACTCCAACAACGTTCCCTCAGCACTATGCCGCTCCTCCTATGTCTCTGCCTCCCACGCCACCCACTTTGCCATCAGTGTTTTTCGCT
ATTCCACAGGCGTGA
mRNA sequenceShow/hide mRNA sequence
AAAATAATTATAGTAATATATATTTTATTTTATTTTATTTTTTATTTATAATTTGTTGCTGTCAAAGTTTTGCTTTCCCTTCCCTCCTTCCCTCACTTTCTCCTTTGTTC
TCATCTCTGACCTAATTCTCTTCTTCTTCTTCCTCTTCACAAACAAAAACTTGAAGGATTTTGTTGGGTTTTGAAGATCAAACAACTTTTGTTTTGAAAATCGAAGAATT
TTTGTTTCGAAGATCGAAGAATTTGGTGTTGAAGATCATGACTCCATCTAACATGGCAAGCCAATTTGGTGATACCACGTACACCAAGGTTTTCGTGGGTGGCTTGGCTT
GGGAGACCCAAAAAGACACCATGAAGAATTACTTTGAGCAATTTGGTGATATCTTGGAAGCTGTTGTTATTACCGACAAGGCCACCGGACGATCCAAAGGCTATGGATTT
GTTACTTTTCGGGAACCCGACGCTGCCATGAGAGCTTGTGTCGATGCGGCGCCGGTCATCGATGACTGGATTTGGAGGGAATGTTGGCTCAGCTTTTCATTCAACACCAA
CTTTCCCTCATTATGCTATCCACCAAGGGATCCCTTACAATCTCTATGGAGCTATTACAATGTGTACGGCGGAGCAACTGCACAGTACCCCATGTACGGCACCGGTCCCG
GCGGCATATTGAGTGGAGCAGCGGCGGCCGCAGCCGCATTCTACCCTTATTTCCAATTCGGGGAAGGAAGCGGCGGCGGAGCTAATGGCTTCACCGGCGGTTCCGGGCAG
CAGGGGTATGGCGTTCAGTACCCTCACCACCTGTTGCAGTACTCGGCGGCCCTTAATTCAACTCCAACAACGTTCCCTCAGCACTATGCCGCTCCTCCTATGTCTCTGCC
TCCCACGCCACCCACTTTGCCATCAGTGTTTTTCGCTATTCCACAGGCGTGACGATGGCTCTTCCTACACCAATCCCACATCGCTAAACGTCCTCAAATTTCCTCCGAAA
CGAAAAATCGCAAGCCCTAACCATGGTTCCATCTCTTTCTCTCTTCACTCTTTTGGCCAATGGTCAGCCCTCCGTCGGGGTTGAGCCAACCAACCATAGCTAACCTCACC
AAAATCATGCATTATTTTTTTTTTTTTATCAAAAGTGGTTCTTAGGCCATGAAGGGACTTGGCCTAAGTTGGCTAATTATGCACATAGCTACGTTTTAATCTTTGATAGC
CTAAGGAAGGCTACAAGGATAGACCAAAAAAACATTTTTCCAAAGGAAAAAAAAAACCCATTTCAAAAAGCTAATATTTTTCTCATTATTGTAATTAAATTTCAATTAGG
AGTAATCACAGCATGCTGCTTCGGTGAAGATCAGCAAATAGCTCCTGAACTCATCAGGATTAGCGCTAGGGTTAAGAATATGTAGCGTTTTTGTTGCTATTATTACAAAT
TAATTAACTTGGTCTAATCAACCAACCCATTTCAAAATATTCCCCATGGGTTTGGGGAATGGTAATGAAACCCTTTTATTAATCAACTCTTAAGCACATTATTAGTTATT
TCTTGTAATTAAACTTCACAAACAATGGTGGCTCAACTTATGGGAGTTATAGCCATGTTTATTTTTGGTAAAGGTTTTGCATTTAGGTCCCATAATTAGGAGTTAATTAG
GATAGGATTAAGCATTCCATGATTTTGAGACTCCATTAATGGATATTGGAGGTCTCAAAATAAGCATTTTGCATGT
Protein sequenceShow/hide protein sequence
MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDDWIWRECWLSFSFNTNFPSLCYPPRDPL
QSLWSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGANGFTGGSGQQGYGVQYPHHLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSVFFA
IPQA