; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:51698..52730
RNA-Seq ExpressionCarg27075
SyntenyCarg27075
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599859.1 Sm-like protein LSM36B, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2096.3Show/hide
Query:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
        ++SPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
Subjt:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
KAG7030534.1 hypothetical protein SDJN02_04571, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-27100Show/hide
Query:  MVNENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFSNQFGAIL
        MVNENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFSNQFGAIL
Subjt:  MVNENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFSNQFGAIL
XP_022988243.1 uncharacterized protein LOC111485552 [Cucurbita maxima]8.6e-1992.59Show/hide
Query:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
        ++ PSYRYA SVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
Subjt:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
XP_023539899.1 uncharacterized protein LOC111800438 [Cucurbita pepo subsp. pepo]6.6e-1994.44Show/hide
Query:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
        ++SPSYR ALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
Subjt:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
TrEMBL top hitse value%identityAlignment
A0A6J1JLP5 uncharacterized protein LOC1114855524.1e-1992.59Show/hide
Query:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
        ++ PSYRYA SVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
Subjt:  ENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAACGAAAACAGTCCTTCGTACCGTTACGCTCTCTCTGTTTTTCTCTTCCTCATCCACCTTCGCAGCCAGCAGTTGAGAGGGATATCCACACCAGATAGAAGAAA
ACCAGAGATGAGTATTGGTGGTGAAAAAGGTTCTGCATCAACAAAGACACCAGCAGACTTCTCAAATCAATTCGGGGCCATCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAACGAAAACAGTCCTTCGTACCGTTACGCTCTCTCTGTTTTTCTCTTCCTCATCCACCTTCGCAGCCAGCAGTTGAGAGGGATATCCACACCAGATAGAAGAAA
ACCAGAGATGAGTATTGGTGGTGAAAAAGGTTCTGCATCAACAAAGACACCAGCAGACTTCTCAAATCAATTCGGGGCCATCCTGTAG
Protein sequenceShow/hide protein sequence
MVNENSPSYRYALSVFLFLIHLRSQQLRGISTPDRRKPEMSIGGEKGSASTKTPADFSNQFGAIL