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Carg27096 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27096
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBeta-amylase
Genome locationCarg_Chr08:5300334..5301249
RNA-Seq ExpressionCarg27096
SyntenyCarg27096
Gene Ontology termsGO:0000272 - polysaccharide catabolic process (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0016161 - beta-amylase activity (molecular function)
GO:0102229 - amylopectin maltohydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593667.1 Beta-amylase 7, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4690.57Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREF         SELRFGSENFEEISWFQALETCVPSAGAGR CAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
KAG7026001.1 hypothetical protein SDJN02_12499 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-60100Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGTIWNTLSGQ
        HSGSGTIWNTLSGQ
Subjt:  HSGSGTIWNTLSGQ
XP_022964580.1 beta-amylase 7-like isoform X1 [Cucurbita moschata]1.3e-4386.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
XP_022964581.1 beta-amylase 7-like isoform X2 [Cucurbita moschata]1.3e-4386.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
XP_022964593.1 beta-amylase 7-like isoform X6 [Cucurbita moschata]1.3e-4386.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
TrEMBL top hitse value%identityAlignment
A0A6J1HI67 Beta-amylase2.2e-3981.13Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFS                   EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
A0A6J1HI70 Beta-amylase1.1e-06100Show/hide
Query:  MKIKRDVLKCTFSCQLCREVQAHSGSGT
        MKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MKIKRDVLKCTFSCQLCREVQAHSGSGT
A0A6J1HJC8 Beta-amylase6.5e-4486.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
A0A6J1HL80 Beta-amylase6.5e-4486.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
A0A6J1HLB5 Beta-amylase6.5e-4486.79Show/hide
Query:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPVEPCLVDGKSILKYLAFRWKGFVI AREFSGFVGDL             EISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGT
        HSGSGT
Subjt:  HSGSGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTTGATTCTTCTCCGGTCGAACCATGCCTGGTTGACGGAAAATCGATTCTGAAGTATCTCGCCTTTCGCTGGAAAGGTTTCGTCATTTCCGCCAGAGAATTTTC
AGGTTTTGTTGGAGATTTAGGTAAATCAGAACTGAGATTTGGAAGTGAAAATTTTGAAGAAATCAGTTGGTTTCAGGCTTTGGAGACATGCGTGCCTTCTGCTGGTGCTG
GTAGAGCTTGTGCGATGAAAATCAAACGTGACGTACTTAAGTGTACTTTTTCCTGCCAGCTTTGTAGAGAAGTCCAAGCGCATAGTGGTAGTGGTACCATATGGAACACG
TTATCTGGACAATAA
mRNA sequenceShow/hide mRNA sequence
CGCACGTTTGAGAATCAATCTCTCTCTCCCTCTCTCTCTCTTTCTCGCCGGACCAGTGAATCGCCGTGGACTGTCGAACCCATGTTCCTTGATTCTTCTCCGGTCGAACC
ATGCCTGGTTGACGGAAAATCGATTCTGAAGTATCTCGCCTTTCGCTGGAAAGGTTTCGTCATTTCCGCCAGAGAATTTTCAGGTTTTGTTGGAGATTTAGGTAAATCAG
AACTGAGATTTGGAAGTGAAAATTTTGAAGAAATCAGTTGGTTTCAGGCTTTGGAGACATGCGTGCCTTCTGCTGGTGCTGGTAGAGCTTGTGCGATGAAAATCAAACGT
GACGTACTTAAGTGTACTTTTTCCTGCCAGCTTTGTAGAGAAGTCCAAGCGCATAGTGGTAGTGGTACCATATGGAACACGTTATCTGGACAATAA
Protein sequenceShow/hide protein sequence
MFLDSSPVEPCLVDGKSILKYLAFRWKGFVISAREFSGFVGDLGKSELRFGSENFEEISWFQALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGTIWNT
LSGQ