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Carg27104 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27104
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:5350894..5353121
RNA-Seq ExpressionCarg27104
SyntenyCarg27104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593675.1 hypothetical protein SDJN03_13151, partial [Cucurbita argyrosperma subsp. sororia]1.4e-141100Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

XP_022964052.1 uncharacterized protein LOC111464196 [Cucurbita moschata]5.3e-14199.21Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDR+LTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSVIPLQFFIRAS+LDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

XP_023000119.1 uncharacterized protein LOC111494411 [Cucurbita maxima]5.9e-14098.03Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDR+LTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIP+EGNRCRV GTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSV+PLQFFIRAS+LDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

XP_023513812.1 uncharacterized protein LOC111778309 [Cucurbita pepo subsp. pepo]5.0e-13997.64Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDR+LTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGG+FVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKF AA+MDFVIP+EGNRCRVEGTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSVIPLQFFIRAS+LDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

XP_038875056.1 uncharacterized protein LOC120067583 [Benincasa hispida]2.2e-7859.53Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLS--SNHPREFHSCIQIDSLFLATFITGTDDRILTIFMP
        MLT+QVAEVE LKNNLLP L +S  A+F+FSRSTVS T +  H++S ++ +L++  PFF LLS   N   EFHSC+QID  FLAT +TGTDDR++T  MP
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLS--SNHPREFHSCIQIDSLFLATFITGTDDRILTIFMP

Query:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG
        DD++F+NL FTT VGHL+Y + + M PPL + +  +  G FVA+ AEWFRD+ATRLS F+T+I VTA  S+V F A  M+F +PIE NRC V G+  G G
Subjt:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG

Query:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        VRF V+ IPLQFFI+AS LDKMVYF  ST+++ LV F TG WTNIVA NP+DRWE L
Subjt:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

TrEMBL top hitse value%identityAlignment
A0A6J1H591 uncharacterized protein LOC1114601711.4e-6552.92Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSS--NHPREFHSCIQIDSLFLATFITGTDDRILTIFMP
        MLT QVA +E L  NLLPLL ++  ADFRFSRSTV FT +  +++S ++A+L++   FF +LS+  N P E  S +QID  F A  +TGTD+ +LT  MP
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSS--NHPREFHSCIQIDSLFLATFITGTDDRILTIFMP

Query:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG
        D+   +NL FT  +GHL+Y + + MGP  N  V  M  G FVA++AEWFRD+ATRL AF+T+I VTA  S+V F A  M+F +  E  RC + G+  G G
Subjt:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG

Query:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        ++F V++IPL FFI+AS LD MVYFY S+  NT V FETG WTNIVA NP+DRWE L
Subjt:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

A0A6J1HGS5 uncharacterized protein LOC1114641962.6e-14199.21Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDR+LTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSVIPLQFFIRAS+LDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

A0A6J1HHS5 uncharacterized protein LOC1114641953.3e-1931.66Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        M T+Q+  +  L+++++ LL +S+ A+ R S+ +VS TV+ S  S  + A  ++F PFF + S+   R+ +  + ID   L+  I   DD  LTI +P  
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFC----AAEMDFVIPIEGNRCRVEGTLGG
         + ++L+  T  G     + +   PP ++ V+     +FVAV+A   R++ATRLS  +  I  TA  S+V F       E+  V  +   R      +GG
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFC----AAEMDFVIPIEGNRCRVEGTLGG

Query:  G-------VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQ
        G       + F  ++ P  FF  A    K+V+F+ ST  NT +V  T  W+NIVA  P+
Subjt:  G-------VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQ

A0A6J1KJ04 uncharacterized protein LOC1114944112.9e-14098.03Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD
        MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDR+LTIFMPDD
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDD

Query:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF
        HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIP+EGNRCRV GTLGGGVRF
Subjt:  HTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRF

Query:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        EVSV+PLQFFIRAS+LDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
Subjt:  EVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

A0A6J1L5I7 uncharacterized protein LOC1114993073.2e-6753.7Show/hide
Query:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSS--NHPREFHSCIQIDSLFLATFITGTDDRILTIFMP
        MLT QVA +E L  NLLPLL ++  ADFRFSRSTV FT +  +++S ++A+L++   FF +LS+  N P E  S +QID  F A  +TGTD+ +LT  MP
Subjt:  MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSS--NHPREFHSCIQIDSLFLATFITGTDDRILTIFMP

Query:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG
        D    +NL FT  +GHL Y + + MGP  N  V  M  G FVA++AEWFRD+ATRL AF+T+I VTA  S+V F A  M+F +P E NRC + G+  G G
Subjt:  DDHTFSNLVFTTCVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGT-LGGG

Query:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL
        ++F V++IPL FFI+AS LD MVYFY S+  NT V FETG WTNIVA NP+DRWE L
Subjt:  VRFEVSVIPLQFFIRASELDKMVYFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACGATTCAGGTTGCAGAGGTGGAAGTGTTGAAGAACAATCTTCTTCCACTTCTCCAAATTTCTCACCACGCCGATTTCAGATTCTCCCGCTCAACCGTCTCCTT
CACTGTCGCCGGCTCCCACAACTCCTCTCTCATTTTCGCACGCCTTGAGGTATTTCACCCTTTCTTCATCCTCTTGTCCTCCAATCACCCTCGAGAGTTCCATTCCTGTA
TTCAGATCGACAGCTTATTCCTAGCCACCTTCATTACCGGCACCGACGATCGCATCTTGACCATTTTCATGCCTGATGATCATACCTTCTCTAATCTCGTTTTCACCACA
TGCGTTGGGCATTTGGAATATTGCTCTCCAATGCAGATGGGACCTCCTCTAAATATTCAAGTGGCATCAATGGCCGGCGGAATATTTGTGGCCGTCAACGCAGAATGGTT
CAGAGACGTTGCTACAAGATTATCTGCCTTCAGTACTAAAATCTCGGTTACTGCAAAGGATTCAGAAGTGAAATTCTGTGCTGCAGAGATGGATTTTGTGATTCCTATAG
AGGGGAACCGGTGCAGAGTTGAAGGAACATTGGGCGGTGGAGTTCGATTTGAAGTGAGTGTGATACCGTTGCAATTTTTCATCCGAGCATCAGAGCTTGACAAGATGGTG
TATTTCTATGGGTCAACTGAGAAGAACACTTTAGTGGTATTCGAGACTGGGTATTGGACCAACATTGTGGCCAGTAACCCACAAGATCGCTGGGAACAACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTACGATTCAGGTTGCAGAGGTGGAAGTGTTGAAGAACAATCTTCTTCCACTTCTCCAAATTTCTCACCACGCCGATTTCAGATTCTCCCGCTCAACCGTCTCCTT
CACTGTCGCCGGCTCCCACAACTCCTCTCTCATTTTCGCACGCCTTGAGGTATTTCACCCTTTCTTCATCCTCTTGTCCTCCAATCACCCTCGAGAGTTCCATTCCTGTA
TTCAGATCGACAGCTTATTCCTAGCCACCTTCATTACCGGCACCGACGATCGCATCTTGACCATTTTCATGCCTGATGATCATACCTTCTCTAATCTCGTTTTCACCACA
TGCGTTGGGCATTTGGAATATTGCTCTCCAATGCAGATGGGACCTCCTCTAAATATTCAAGTGGCATCAATGGCCGGCGGAATATTTGTGGCCGTCAACGCAGAATGGTT
CAGAGACGTTGCTACAAGATTATCTGCCTTCAGTACTAAAATCTCGGTTACTGCAAAGGATTCAGAAGTGAAATTCTGTGCTGCAGAGATGGATTTTGTGATTCCTATAG
AGGGGAACCGGTGCAGAGTTGAAGGAACATTGGGCGGTGGAGTTCGATTTGAAGTGAGTGTGATACCGTTGCAATTTTTCATCCGAGCATCAGAGCTTGACAAGATGGTG
TATTTCTATGGGTCAACTGAGAAGAACACTTTAGTGGTATTCGAGACTGGGTATTGGACCAACATTGTGGCCAGTAACCCACAAGATCGCTGGGAACAACTTTAGACGAA
GTCTTTTACTTTCCTTCTCTCCCCCAAATAGAATTGGACGAAGCTATTAGAATGGCACTCAAATGTGCATATAAGTATATTACCAATATGTTCATTCTTTCATTCTCCAT
CCATATTTTTTCTGATTAAAAGTTCTGTCATCTCAATTTTGAATA
Protein sequenceShow/hide protein sequence
MLTIQVAEVEVLKNNLLPLLQISHHADFRFSRSTVSFTVAGSHNSSLIFARLEVFHPFFILLSSNHPREFHSCIQIDSLFLATFITGTDDRILTIFMPDDHTFSNLVFTT
CVGHLEYCSPMQMGPPLNIQVASMAGGIFVAVNAEWFRDVATRLSAFSTKISVTAKDSEVKFCAAEMDFVIPIEGNRCRVEGTLGGGVRFEVSVIPLQFFIRASELDKMV
YFYGSTEKNTLVVFETGYWTNIVASNPQDRWEQL