; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27120 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27120
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr01:5493122..5494792
RNA-Seq ExpressionCarg27120
SyntenyCarg27120
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-16098.97Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVA+FGKKPA  PKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-162100Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]4.1e-16199.31Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]2.6e-16098.97Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_023523842.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita pepo subsp. pepo]3.4e-16098.63Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLA STA+ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic1.1e-15193.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA S S+P T K VA+FGKKPAA  KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic5.4e-15193.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA    SASSP T K VA+FGKKPAA  KPKP+  SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic3.1e-15194.16Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF G S RSA SASS VT K VA+FGKKPAA  KP  +AVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGN ERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic2.0e-16199.31Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic1.3e-16098.97Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic4.4e-5751.56Show/hide
Query:  SGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE
        S   AR+A S SS +  +   I  +K AA PKP  S+ SP       WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E
Subjt:  SGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE

Query:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPL
        +IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++   A +VVL+G  E YRI  G   E  D L+PGG FDPL
Subjt:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPL

Query:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
        GLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

P12331 Chlorophyll a-b binding protein 2, chloroplastic2.4e-5549.23Show/hide
Query:  ASARSASSASSPVTSKIVAIFG------KKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
        A+A  A S+ +        +FG      +K AA PKP  S         + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K 
Subjt:  ASARSASSASSPVTSKIVAIFG------KKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY

Query:  QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGP
        +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++   A +VVL+G  E YRI  G   E  D L+PGG 
Subjt:  QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGP

Query:  FDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
        FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

P27497 Chlorophyll a-b binding protein M9, chloroplastic3.1e-5548.09Show/hide
Query:  SGASARSASSASSPVTSKIVAIFG------KKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS
        S   A S+++ +    +   ++FG      +K AA  KP  S+ SP       WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+
Subjt:  SGASARSASSASSPVTSKIVAIFG------KKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS

Query:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPG
        K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++   A +VVL+G  E YR+  G   E  D L+PG
Subjt:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPG

Query:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
        G FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic3.3e-5749.37Show/hide
Query:  IVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPE
        ++A  G K     + +   ++       ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE
Subjt:  IVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPE

Query:  AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKE
          +++      E VWFK GA +     LNY GN   I   ++I  +A +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKE
Subjt:  AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKE

Query:  IKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFAN
        IKNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Subjt:  IKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFAN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic1.6e-13182.92Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SA  ASSP T K VA+F KK  A  K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 35.1e-5345.56Show/hide
Query:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   + +AS  + S  V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++   A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

AT1G29930.1 chlorophyll A/B binding protein 13.0e-5345.56Show/hide
Query:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + + + +AS  + S  V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++   A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

AT2G05100.1 photosystem II light harvesting complex gene 2.11.0e-5353.59Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFANN
        HL+DP ANN
Subjt:  HLSDPFANN

AT3G27690.1 photosystem II light harvesting complex gene 2.31.8e-5353.11Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFANN
        H++DP ANN
Subjt:  HLSDPFANN

AT4G10340.1 light harvesting complex of photosystem II 51.1e-13282.92Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SA  ASSP T K VA+F KK  A  K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGTGTCTCTGAAATGCTGAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCAGCGTCCTCTGCTTC
TAGCCCGGTCACCTCCAAGATCGTGGCGATTTTCGGGAAGAAGCCAGCCGCCGCTCCCAAGCCCAAGCCCTCCGCTGTCTCTCCAGCCAATGACGAGCTCGCCAAGTGGT
ATGGTCCCGACAGGAGGATTTTCCTCCCCGACGGGTTATTGGACCGATCCGAGATCCCCGAATACCTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTCGGA
CTCAGCAAGAAACCAGAGGACTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGCTTCATCATCCCCGAGGCCTTCAACAA
ATTCGGTGCCAACTGCGGCCCTGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCGATCAACCTCATTG
TCGCAGTCGCTGCAGAGGTTGTTCTTGTCGGTGGTGCCGAGTACTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTCCACCCGGGCGGTCCGTTCGACCCGTTG
GGACTGGCAGACGACCCGGACCAGGCGGCAATCTTGAAGGTGAAGGAGATCAAGAATGGAAGACTGGCAATGTTTGCAATGCTGGGGTTTTACTTCCAGGCCTACGTGAC
CGGAGAAGGGCCGGTGGAGAATTTGGCGAAGCATTTGAGCGATCCTTTTGCAAACAATTTGCTCACAGTCATTTCTGGGAATGCAGAGAGAGTTCCAACTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGTGTCTCTGAAATGCTGAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCAGCGTCCTCTGCTTC
TAGCCCGGTCACCTCCAAGATCGTGGCGATTTTCGGGAAGAAGCCAGCCGCCGCTCCCAAGCCCAAGCCCTCCGCTGTCTCTCCAGCCAATGACGAGCTCGCCAAGTGGT
ATGGTCCCGACAGGAGGATTTTCCTCCCCGACGGGTTATTGGACCGATCCGAGATCCCCGAATACCTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTCGGA
CTCAGCAAGAAACCAGAGGACTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGCTTCATCATCCCCGAGGCCTTCAACAA
ATTCGGTGCCAACTGCGGCCCTGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCGATCAACCTCATTG
TCGCAGTCGCTGCAGAGGTTGTTCTTGTCGGTGGTGCCGAGTACTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTCCACCCGGGCGGTCCGTTCGACCCGTTG
GGACTGGCAGACGACCCGGACCAGGCGGCAATCTTGAAGGTGAAGGAGATCAAGAATGGAAGACTGGCAATGTTTGCAATGCTGGGGTTTTACTTCCAGGCCTACGTGAC
CGGAGAAGGGCCGGTGGAGAATTTGGCGAAGCATTTGAGCGATCCTTTTGCAAACAATTTGCTCACAGTCATTTCTGGGAATGCAGAGAGAGTTCCAACTCTTTGAACAC
TGCAAGTTTGAGTATTGAATGGAAGTGTTGAATGTGTTTGTAAATTTGTATTGAGACTATTTGTAGCCTCTGACCACTCACTCTCAGTGCATTTAAAAGAGCTATGAACA
AGAGTTTGATATCAAATTTTCTGTCAACTTAATTTATGTACTTTTCATGATTCCTGAATTAGTCGTATAAAGTTGATCTTTAATGAACTTGAATAATAACCATATTTTTC
GTAC
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPL
GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL