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Carg27126 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27126
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TIFY 10b-like
Genome locationCarg_Chr14:9243563..9244096
RNA-Seq ExpressionCarg27126
SyntenyCarg27126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581773.1 Protein TIFY 10b, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1757.01Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  T+ +             +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRF     KKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

KAG7018224.1 hypothetical protein SDJN02_20092, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-44100Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL
        MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL

XP_022955789.1 protein TIFY 10b-like [Cucurbita moschata]9.2e-2261.68Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  T+ +             +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

XP_022980722.1 protein TIFY 10b-like [Cucurbita maxima]2.7e-2162.62Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQR-TTSDQ------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  TT +Q            +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGD+KKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQR-TTSDQ------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

XP_023527028.1 protein TIFY 10b-like [Cucurbita pepo subsp. pepo]9.2e-2261.68Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  T+ +             +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

TrEMBL top hitse value%identityAlignment
A0A6J1GBZ2 protein TIFY 10b-like isoform X23.3e-0944.76Show/hide
Query:  MAGKGIVPLPDLPLPSS--------PTRLADQYHQRTTSD---QKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQ
        MAGKGIV        ++        P    +Q   + + D    +   LHRFF ++KDRV+ARAPYQ++S+QYS SS P GE YR  N  EK  Q SSN 
Subjt:  MAGKGIVPLPDLPLPSS--------PTRLADQYHQRTTSD---QKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQ

Query:  FDLNL
        FDLN+
Subjt:  FDLNL

A0A6J1GBZ3 protein TIFY 10b-like isoform X14.3e-0964.91Show/hide
Query:  LHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL
        LHRFF ++KDRV+ARAPYQ++S+QYS SS P GE YR  N  EK  Q SSN FDLN+
Subjt:  LHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL

A0A6J1GXA0 protein TIFY 10b-like4.4e-2261.68Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  T+ +             +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQ-------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

A0A6J1IS28 protein TIFY 10b-like1.3e-2162.62Show/hide
Query:  MAGKGIVPLPDLPLPSSPTRLADQYHQR-TTSDQ------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS
        MAGKGIVP       S+ T ++D+  +  TT +Q            +   LHRFF ++KDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGD+KKTQQSS
Subjt:  MAGKGIVPLPDLPLPSSPTRLADQYHQR-TTSDQ------------KSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSS

Query:  NQFDLNL
        NQFDLNL
Subjt:  NQFDLNL

A0A6J1K9M8 protein TIFY 10b-like1.9e-0966.67Show/hide
Query:  LHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL
        LHRFF ++KDRV+ARAPYQ++S+QYS SS P GESYR   G EK  Q SSN FDLN+
Subjt:  LHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL

SwissProt top hitse value%identityAlignment
Q9C9E3 Protein TIFY 11B4.0e-0443.48Show/hide
Query:  KGIVPLPDLPLPSSPTRLAD----QYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTP
        K  V +PDL  P+S     D    Q HQ      +   LHRFF ++KDR  ARAPYQVN     GS  P
Subjt:  KGIVPLPDLPLPSSPTRLAD----QYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTP

Q9LDU5 Protein TIFY 11A4.0e-0440.98Show/hide
Query:  KGIVPLPDLPLPSSPTRLADQYHQRTTSDQ------KSFLLHRFFGEKKDRVTARAPYQVN
        K  + LPDL  P+    L  +  Q+   +Q      +   LHRFF ++KDR  ARAPYQVN
Subjt:  KGIVPLPDLPLPSSPTRLADQYHQRTTSDQ------KSFLLHRFFGEKKDRVTARAPYQVN

Arabidopsis top hitse value%identityAlignment
AT1G17380.1 jasmonate-zim-domain protein 52.9e-0540.98Show/hide
Query:  KGIVPLPDLPLPSSPTRLADQYHQRTTSDQ------KSFLLHRFFGEKKDRVTARAPYQVN
        K  + LPDL  P+    L  +  Q+   +Q      +   LHRFF ++KDR  ARAPYQVN
Subjt:  KGIVPLPDLPLPSSPTRLADQYHQRTTSDQ------KSFLLHRFFGEKKDRVTARAPYQVN

AT1G72450.1 jasmonate-zim-domain protein 62.9e-0543.48Show/hide
Query:  KGIVPLPDLPLPSSPTRLAD----QYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTP
        K  V +PDL  P+S     D    Q HQ      +   LHRFF ++KDR  ARAPYQVN     GS  P
Subjt:  KGIVPLPDLPLPSSPTRLAD----QYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTAAAGGAATCGTGCCTCTTCCAGATCTGCCGCTACCGTCGTCTCCGACAAGGTTAGCAGATCAGTACCACCAGAGAACAACCTCCGACCAAAAGAGCTTTCT
CCTCCATCGATTCTTCGGAGAAAAGAAAGACAGAGTTACAGCCAGAGCACCATATCAAGTGAATTCCCGGCAATATTCTGGTTCTTCTACACCGACCGGAGAAAGCTACA
GATTCAAGAACGGCGATGAGAAGAAAACCCAGCAATCTTCCAACCAATTTGATCTAAATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTAAAGGAATCGTGCCTCTTCCAGATCTGCCGCTACCGTCGTCTCCGACAAGGTTAGCAGATCAGTACCACCAGAGAACAACCTCCGACCAAAAGAGCTTTCT
CCTCCATCGATTCTTCGGAGAAAAGAAAGACAGAGTTACAGCCAGAGCACCATATCAAGTGAATTCCCGGCAATATTCTGGTTCTTCTACACCGACCGGAGAAAGCTACA
GATTCAAGAACGGCGATGAGAAGAAAACCCAGCAATCTTCCAACCAATTTGATCTAAATTTGTAGGCAAAATTATAATCTAAGCGTCTGCTTAATTTCACCTTAAAATCC
TGACATCCTCCTACCCTTCTCCAAGGAATATGAACAAGAACATTGCTCTGTAATTAATTCTCAGATTATAGATCATCATTTGT
Protein sequenceShow/hide protein sequence
MAGKGIVPLPDLPLPSSPTRLADQYHQRTTSDQKSFLLHRFFGEKKDRVTARAPYQVNSRQYSGSSTPTGESYRFKNGDEKKTQQSSNQFDLNL