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Carg27127 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27127
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TIFY 10b-like
Genome locationCarg_Chr14:9243073..9243560
RNA-Seq ExpressionCarg27127
SyntenyCarg27127
Gene Ontology termsNA
InterPro domainsIPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581773.1 Protein TIFY 10b, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3069.09Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDSAAAACRR+GRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +        +EAVGLF PPSATQMTIF   K    N
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLP  +  EI
Subjt:  DLPRRRRREI
KAG7018223.1 hypothetical protein SDJN02_20091 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-55100Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLPRRRRREI
Subjt:  DLPRRRRREI
KAG7018227.1 Protein TIFY 10b [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3070Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDS AAACRR+GRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +     P  +EAVGLFLPPSATQMTIF   K    N
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLP  +  EI
Subjt:  DLPRRRRREI
XP_022955789.1 protein TIFY 10b-like [Cucurbita moschata]3.0e-3271.82Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +     P  +EAVGLFLPPSATQMTIF   K    N
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLP  +  EI
Subjt:  DLPRRRRREI
XP_023527028.1 protein TIFY 10b-like [Cucurbita pepo subsp. pepo]3.3e-3170.91Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +     P  +EAVGLF PPSATQMTIF   K    N
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLP  +  EI
Subjt:  DLPRRRRREI
TrEMBL top hitse value%identityAlignment
A0A6J1GBZ2 protein TIFY 10b-like isoform X26.1e-2363.16Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC
        MS PSD+AAA  RR GRAPEKSSFAQTCNLLSQYLKEKR LGI+PRIEPKDEFP          +     P  E+AVGLFL    PPSA QMTIF   K 
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC

Query:  WCSNDLPRRRRREI
           NDLP  R  EI
Subjt:  WCSNDLPRRRRREI
A0A6J1GBZ3 protein TIFY 10b-like isoform X16.1e-2363.16Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC
        MS PSD+AAA  RR GRAPEKSSFAQTCNLLSQYLKEKR LGI+PRIEPKDEFP          +     P  E+AVGLFL    PPSA QMTIF   K 
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC

Query:  WCSNDLPRRRRREI
           NDLP  R  EI
Subjt:  WCSNDLPRRRRREI
A0A6J1GXA0 protein TIFY 10b-like1.5e-3271.82Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN
        MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +     P  +EAVGLFLPPSATQMTIF   K    N
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSN

Query:  DLPRRRRREI
        DLP  +  EI
Subjt:  DLPRRRRREI
A0A6J1IS28 protein TIFY 10b-like1.6e-2664.91Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLF----LPPSATQMTIFTAEKC
        M NPSDS  AACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFP          +     P  +EAVG+F     PPSATQMTIF   K 
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLF----LPPSATQMTIFTAEKC

Query:  WCSNDLPRRRRREI
           NDLP  +  EI
Subjt:  WCSNDLPRRRRREI
A0A6J1K9M8 protein TIFY 10b-like1.4e-2262.28Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC
        MS PSD+AAA  R+  RAPEKSSFAQTCNLLSQYLKEKR LGI+PRIEPKDEFP          +     P  E+AVGLFL    PPSATQMTIF   K 
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFL----PPSATQMTIFTAEKC

Query:  WCSNDLPRRRRREI
           NDLP  R  EI
Subjt:  WCSNDLPRRRRREI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17380.1 jasmonate-zim-domain protein 51.3e-0433.08Show/hide
Query:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLG-ITPRIEPKDEFPDGSAA--GDYEPVDK--------HGKPRREEAVGLFL--------
        MS+ +++A A      +APEKS F + C+LLS+YLKEK S G I   +  K   PD S A  G ++P  K        H K     + G  +        
Subjt:  MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLG-ITPRIEPKDEFPDGSAA--GDYEPVDK--------HGKPRREEAVGLFL--------

Query:  -PPSATQMTIFTAEKCWCSNDLPRRRRREI
          P ++Q+TIF   K    N+ P  + +EI
Subjt:  -PPSATQMTIFTAEKCWCSNDLPRRRRREI
AT1G72450.1 jasmonate-zim-domain protein 62.2e-0467.86Show/hide
Query:  SGRAPEKSSFAQTCNLLSQYLKEKRSLG
        +G+APEKS+F+Q C+LLS+YLKEK S G
Subjt:  SGRAPEKSSFAQTCNLLSQYLKEKRSLG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAACCCGTCGGACAGCGCCGCCGCCGCCTGCCGGAGGTCCGGTCGGGCACCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGCTGAGTCAGTACTTGAAGGA
GAAGAGAAGCCTTGGAATTACCCCTAGAATTGAACCAAAAGATGAGTTTCCGGACGGCTCGGCCGCCGGCGATTATGAACCTGTTGACAAACATGGAAAACCCAGAAGAG
AAGAGGCGGTGGGGCTTTTTCTGCCGCCGTCTGCCACGCAGATGACCATTTTTACTGCGGAAAAGTGCTGGTGTTCAAATGATCTTCCTCGGAGAAGGCGGAGGGAGATA
TGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAATTTGAACACACAAGAGCCCTTCAGATCTGAAACAACTTACAATTCCACCATGTCTAACCCGTCGGACAGCGCCGCCGCCGCCTGCCGGAGGTCCGGTCGGGCA
CCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGCTGAGTCAGTACTTGAAGGAGAAGAGAAGCCTTGGAATTACCCCTAGAATTGAACCAAAAGATGAGTTTCCGGA
CGGCTCGGCCGCCGGCGATTATGAACCTGTTGACAAACATGGAAAACCCAGAAGAGAAGAGGCGGTGGGGCTTTTTCTGCCGCCGTCTGCCACGCAGATGACCATTTTTA
CTGCGGAAAAGTGCTGGTGTTCAAATGATCTTCCTCGGAGAAGGCGGAGGGAGATATGA
Protein sequenceShow/hide protein sequence
MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITPRIEPKDEFPDGSAAGDYEPVDKHGKPRREEAVGLFLPPSATQMTIFTAEKCWCSNDLPRRRRREI