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Carg27144 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27144
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclopropane-fatty-acyl-phospholipid synthase family protein
Genome locationCarg_Chr19:2956083..2958944
RNA-Seq ExpressionCarg27144
SyntenyCarg27144
Gene Ontology termsNA
InterPro domainsIPR026669 - Arsenite methyltransferase-like
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011453.1 ufaA1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3958.76Show/hide
Query:  MDKEEGLLNLIL---------------------------------SNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLR
        MDKEEGLLNLIL                                 SNELFSLFLDDTMMYSCAIF                           KREDEDLR
Subjt:  MDKEEGLLNLIL---------------------------------SNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLR

Query:  IAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHCTGIT-EMIEAVGHEFMEDFFGSCESVLEENGLL
        IAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHCTGIT  MIEAVGHEFMEDFFGSCESVL++NGLL
Subjt:  IAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHCTGIT-EMIEAVGHEFMEDFFGSCESVLEENGLL

KAG7011456.1 hypothetical protein SDJN02_26362, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-86100Show/hide
Query:  MDKEEGLLNLILSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQT
        MDKEEGLLNLILSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQT
Subjt:  MDKEEGLLNLILSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQT

Query:  RCHCTGITEMIEAVGHEFMEDFFGSCESVLEENGLLNNNGHGFCIKALVNNSFMFFIFNNNY
        RCHCTGITEMIEAVGHEFMEDFFGSCESVLEENGLLNNNGHGFCIKALVNNSFMFFIFNNNY
Subjt:  RCHCTGITEMIEAVGHEFMEDFFGSCESVLEENGLLNNNGHGFCIKALVNNSFMFFIFNNNY

XP_022932946.1 uncharacterized protein LOC111439562 isoform X1 [Cucurbita moschata]4.0e-3352.84Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVL++NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

XP_022973880.1 uncharacterized protein LOC111472470 isoform X2 [Cucurbita maxima]3.1e-3353.41Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVLE+NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

XP_022974371.1 uncharacterized protein LOC111473008 isoform X1 [Cucurbita maxima]6.8e-3352.84Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        L+NELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVLE+NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

TrEMBL top hitse value%identityAlignment
A0A5A7U4B4 Mycolic acid cyclopropane synthase4.2e-2847.16Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTM YSCAIF                           KREDEDLR+AQLR       K +I+K H VLDIGCGWG+LAIE+VKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        T IT                                             M+E VGHEFMEDFFGSCESVL ENGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

A0A6J1EXS1 uncharacterized protein LOC111439562 isoform X11.9e-3352.84Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVL++NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

A0A6J1IB60 uncharacterized protein LOC111473008 isoform X13.3e-3352.84Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        L+NELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVLE+NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

A0A6J1IB85 LOW QUALITY PROTEIN: uncharacterized protein LOC1114735481.6e-3252.27Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLD+GCGWGTLAIEIVKQ  CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVLE+NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

A0A6J1ICH0 uncharacterized protein LOC111472470 isoform X21.5e-3353.41Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELFSLFLDDTMMYSCAIF                           KREDEDLRIAQLR       K RINKKHKVLDIGCGWGTLAIEIVKQT CHC
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                             MIEAVGHEFMEDFFGSCESVLE+NGLL
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23470.1 Cyclopropane-fatty-acyl-phospholipid synthase1.5e-2238.86Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNE F LF+DDTMMYS AIF                           K E+ED R AQ+R       K RI K H+VL++GCGWGT AIE+VK+T C  
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL
        TGIT                                            EMIEAVGHEFM+ FF  CE  L ENG+
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL

AT3G23480.1 Cyclopropane-fatty-acyl-phospholipid synthase1.2e-1935.63Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRI------NKKHKVLDIGCGWGTLAIEIVKQTRCHCT
        LSNE F LF+DDTMMYS A+F                           K E+E+LR AQ+RK  +       + ++VL+IGCGWGTLAIE+VK+T C  T
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRI------NKKHKVLDIGCGWGTLAIEIVKQTRCHCT

Query:  GIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL
        G T                                            EMIE VGH+FME FF  CE+ L E+G+
Subjt:  GIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL

AT3G23480.2 Cyclopropane-fatty-acyl-phospholipid synthase1.5e-1735.93Show/hide
Query:  SNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQTRCHCTGIT----
        SNE F LF+DDTMMYS A+FKV I NF       +             R+ ED            + ++VL+IGCGWGTLAIE+VK+T C  TG T    
Subjt:  SNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQTRCHCTGIT----

Query:  ----------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL
                                                EMIE VGH+FME FF  CE+ L E+G+
Subjt:  ----------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGL

AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase1.1e-2339.77Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELF LFLDDTM YS A+F                           K +DEDLR AQ+R       K RI K H+VL+IGCGWGTLAIE+V++T C  
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                            EM+EAVGHEFME FF  CE+ L E+GL+
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL

AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase8.1e-2439.77Show/hide
Query:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC
        LSNELF  FLDDTM YS A+F                           K +DEDLR AQ+R       K RI K H+VL+IGCGWGTLAIE+V++T C  
Subjt:  LSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLR-------KTRINKKHKVLDIGCGWGTLAIEIVKQTRCHC

Query:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL
        TGIT                                            EM+EAVGHEFME FF  CE+ L ENGL+
Subjt:  TGIT--------------------------------------------EMIEAVGHEFMEDFFGSCESVLEENGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGAAGAAGGTCTTCTTAATCTTATTTTGAGCAATGAACTTTTTTCTCTCTTCTTGGATGATACGATGATGTACTCATGTGCCATCTTTAAGGTTCGTATAGC
CAACTTTTGTTTATACAATTTGATAATTTATATGATGATGTTTTGTATTTGCATTGTTTTCTTAATAAAGAGGGAAGATGAAGATTTGAGGATTGCACAATTGAGAAAAA
CAAGAATCAACAAAAAGCATAAGGTTTTGGATATTGGGTGTGGTTGGGGAACTTTAGCTATTGAAATAGTTAAGCAAACTAGATGTCACTGTACCGGCATTACCGAGATG
ATAGAAGCGGTCGGCCACGAATTCATGGAAGATTTTTTTGGTTCTTGCGAATCAGTGTTAGAGGAAAATGGTCTTCTTAATAACAACGGTCATGGCTTCTGCATCAAGGC
TTTGGTAAATAATTCATTTATGTTCTTCATTTTCAATAATAATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGAAGAAGGTCTTCTTAATCTTATTTTGAGCAATGAACTTTTTTCTCTCTTCTTGGATGATACGATGATGTACTCATGTGCCATCTTTAAGGTTCGTATAGC
CAACTTTTGTTTATACAATTTGATAATTTATATGATGATGTTTTGTATTTGCATTGTTTTCTTAATAAAGAGGGAAGATGAAGATTTGAGGATTGCACAATTGAGAAAAA
CAAGAATCAACAAAAAGCATAAGGTTTTGGATATTGGGTGTGGTTGGGGAACTTTAGCTATTGAAATAGTTAAGCAAACTAGATGTCACTGTACCGGCATTACCGAGATG
ATAGAAGCGGTCGGCCACGAATTCATGGAAGATTTTTTTGGTTCTTGCGAATCAGTGTTAGAGGAAAATGGTCTTCTTAATAACAACGGTCATGGCTTCTGCATCAAGGC
TTTGGTAAATAATTCATTTATGTTCTTCATTTTCAATAATAATTATTAA
Protein sequenceShow/hide protein sequence
MDKEEGLLNLILSNELFSLFLDDTMMYSCAIFKVRIANFCLYNLIIYMMMFCICIVFLIKREDEDLRIAQLRKTRINKKHKVLDIGCGWGTLAIEIVKQTRCHCTGITEM
IEAVGHEFMEDFFGSCESVLEENGLLNNNGHGFCIKALVNNSFMFFIFNNNY