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Carg27152 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27152
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCoiled-coil domain-containing protein 21, putative isoform 2
Genome locationCarg_Chr11:12060839..12061496
RNA-Seq ExpressionCarg27152
SyntenyCarg27152
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589150.1 hypothetical protein SDJN03_17715, partial [Cucurbita argyrosperma subsp. sororia]6.4e-69100Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
KAG7022850.1 hypothetical protein SDJN02_16586, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-69100Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
XP_022930732.1 uncharacterized protein LOC111437124 [Cucurbita moschata]7.1e-6899.26Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDKHTSINP KLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
XP_022988910.1 uncharacterized protein LOC111486122 [Cucurbita maxima]6.9e-6393.33Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDK TSINP KLKAAAEGLTNVGKAFGV+TA VFGGST IFGFTMSKLDLNNA+EIQQKGRSM EPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKW VERNGD+KEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
XP_023531801.1 uncharacterized protein LOC111793948 [Cucurbita pepo subsp. pepo]4.8e-6494.81Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDKHTSINP KLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSM EPKI MVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKW V+RN D+KEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
TrEMBL top hitse value%identityAlignment
A0A0A0K240 Uncharacterized protein1.7e-5478.52Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQ ENS++ASTANDLRTDKHT INP KLKAAAEGL +VGKAF  +TALVFGG+T IFGFT+SKLD+NNA EIQ KG+ M EPK+EM+R+QL P KVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKW VER+ D+KEKPLIKELSKILG+KTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
A0A1S3C0Z0 uncharacterized protein LOC1034956221.7e-5478.52Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQ ENS++ASTANDLRTDKHT +NP KLKAAAEGL +VGKAF V+TALVFGG+T IFGFTMSKLD+NNA EIQ KG+SM EPK+EM+R+Q  P KVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADD+SKKW VER+ D+KEKPLIKELSKILG+KTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
A0A6J1C1Z9 uncharacterized protein LOC1110077262.4e-5377.04Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQ ENSV+ASTANDLR DKHT+INP KLKAAAEGL +VGKAF ++TALVFGG+T IFGFT+SKLDLNN++EIQ KGR++ EPK+EM+REQL P K W
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        A+DMSKKW VER+ D+KEKPLIKELSK LG+KTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
A0A6J1ERF2 uncharacterized protein LOC1114371243.4e-6899.26Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDKHTSINP KLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
A0A6J1JKW8 uncharacterized protein LOC1114861223.3e-6393.33Show/hide
Query:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW
        WELPQYENSVVASTANDLRTDK TSINP KLKAAAEGLTNVGKAFGV+TA VFGGST IFGFTMSKLDLNNA+EIQQKGRSM EPKIEMVREQLAPLKVW
Subjt:  WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVW

Query:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
        ADDMSKKW VERNGD+KEKPLIKELSKILGSKTPN
Subjt:  ADDMSKKWRVERNGDMKEKPLIKELSKILGSKTPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05060.1 unknown protein3.5e-4155.88Show/hide
Query:  WELPQYENSVVASTANDLRTDKH-TSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKV
        W+LP+ ENSV+ASTAN+LR D++ T +NP KLKAA EGL ++GKAF  +T ++FG +T +FG   SKLD+ NAD+I+ KG+ +F+PK+E ++EQ+ PL+ 
Subjt:  WELPQYENSVVASTANDLRTDKH-TSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKV

Query:  WADDMSKKWRVERNG--DMKEKPLIKELSKILGSKT
        WA++MSKKW +E  G   +KEKP++KELSKILG K+
Subjt:  WADDMSKKWRVERNG--DMKEKPLIKELSKILGSKT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGAATTGCCTCAATACGAAAACTCAGTAGTGGCCTCAACAGCTAACGACTTAAGAACCGACAAGCACACCTCTATTAATCCTCACAAGTTGAAGGCTGCTGCTGAAGG
CCTTACAAATGTTGGAAAGGCATTTGGTGTATCTACTGCGCTTGTCTTTGGTGGCTCCACCTTCATCTTTGGGTTCACCATGTCCAAGCTAGACCTCAACAATGCCGATG
AGATTCAACAAAAAGGAAGAAGCATGTTTGAACCAAAGATAGAGATGGTTAGAGAGCAACTAGCTCCCCTCAAAGTCTGGGCTGATGATATGTCGAAGAAATGGCGTGTT
GAGAGAAATGGCGATATGAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGATTTTGGGTTCTAAGACTCCCAAC
mRNA sequenceShow/hide mRNA sequence
TGGGAATTGCCTCAATACGAAAACTCAGTAGTGGCCTCAACAGCTAACGACTTAAGAACCGACAAGCACACCTCTATTAATCCTCACAAGTTGAAGGCTGCTGCTGAAGG
CCTTACAAATGTTGGAAAGGCATTTGGTGTATCTACTGCGCTTGTCTTTGGTGGCTCCACCTTCATCTTTGGGTTCACCATGTCCAAGCTAGACCTCAACAATGCCGATG
AGATTCAACAAAAAGGAAGAAGCATGTTTGAACCAAAGATAGAGATGGTTAGAGAGCAACTAGCTCCCCTCAAAGTCTGGGCTGATGATATGTCGAAGAAATGGCGTGTT
GAGAGAAATGGCGATATGAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGATTTTGGGTTCTAAGACTCCCAAC
Protein sequenceShow/hide protein sequence
WELPQYENSVVASTANDLRTDKHTSINPHKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVWADDMSKKWRV
ERNGDMKEKPLIKELSKILGSKTPN