; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27154 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27154
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBeta-adaptin-like protein
Genome locationCarg_Chr11:12057244..12058310
RNA-Seq ExpressionCarg27154
SyntenyCarg27154
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030131 - clathrin adaptor complex (cellular component)
GO:0030276 - clathrin binding (molecular function)
InterPro domainsIPR009028 - Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR011989 - Armadillo-like helical
IPR012295 - TBP domain superfamily
IPR013041 - Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR015151 - Beta-adaptin appendage, C-terminal subdomain
IPR026739 - AP complex subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589148.1 Beta-adaptin-like protein B, partial [Cucurbita argyrosperma subsp. sororia]7.4e-76100Show/hide
Query:  MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA
        MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA
Subjt:  MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA

Query:  EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
Subjt:  EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

KAG7022848.1 Beta-adaptin-like protein B, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-76100Show/hide
Query:  MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA
        MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA
Subjt:  MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFA

Query:  EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
Subjt:  EDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

XP_022157680.1 beta-adaptin-like protein B [Momordica charantia]5.0e-3280.49Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF EDG MER NFLETWRSLPDSNEVS+DF  I++NN+++++D
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

XP_022157680.1 beta-adaptin-like protein B [Momordica charantia]2.1e-0684.85Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        + A+LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

XP_022157680.1 beta-adaptin-like protein B [Momordica charantia]1.1e-3186.25Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAI
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMHIFF EDG MER +FLETWRSLPDSNEV+RDF  +LINNV+AI
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAI

XP_022969976.1 beta-adaptin-like protein B isoform X1 [Cucurbita maxima]6.2e-0681.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

XP_038888500.1 beta-adaptin-like protein C [Benincasa hispida]7.3e-0759.65Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE-----VVFQNMSQGPPSSLLQVAV
        + A+LNNATVETD+PDLR RAYIYWRLLSTDPE     V+ +    G  S+LL  A+
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE-----VVFQNMSQGPPSSLLQVAV

XP_038888500.1 beta-adaptin-like protein C [Benincasa hispida]1.2e-3078.05Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF +DG MER NFLETWRSLPDSNEVS+DF  I++ N++A+++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

TrEMBL top hitse value%identityAlignment
A0A6J1DTS4 Beta-adaptin-like protein2.4e-3280.49Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF EDG MER NFLETWRSLPDSNEVS+DF  I++NN+++++D
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

A0A6J1DTS4 Beta-adaptin-like protein1.0e-0684.85Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        + A+LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

A0A6J1DTS4 Beta-adaptin-like protein6.0e-3178.05Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF +DG MER NFLETWRSLPDSNEVS+DF  I++ N++A+++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

A0A6J1H2F3 Beta-adaptin-like protein1.0e-0684.85Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        + A+LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

A0A6J1HXU4 beta-adaptin-like protein B isoform X23.0e-0681.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

A0A6J1HXU4 beta-adaptin-like protein B isoform X26.0e-3179.27Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQN+SQGPPSSLLQVAVKNNQ PVWYFNDKISMHIFF +DG MER NFLETWRSLPDSNEVS+DF  + I NV+A+++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

A0A6J1HZA3 Beta-adaptin-like protein3.0e-0681.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

A0A6J1HZA3 Beta-adaptin-like protein6.0e-3178.05Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF +DG MER NFLETWRSLPDSNEVS+DF  I++ N++A+++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

A0A6J1I2I3 beta-adaptin-like protein B isoform X33.0e-0681.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

A0A6J1I2I3 beta-adaptin-like protein B isoform X36.0e-3178.05Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P VVFQNMSQGPPSSLLQVAVKNNQ PVWYFNDKISMH+FF +DG MER NFLETWRSLPDSNEVS+DF  I++ N++A+++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

SwissProt top hitse value%identityAlignment
O81742 Beta-adaptin-like protein C4.4e-2362.2Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P V+ QNMS G  SS+LQVAVKNNQ PVWYF DKI ++  F+EDG MER  FLETW+SLPDSNEV ++F  I I +V++ +D
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

O81742 Beta-adaptin-like protein C8.1e-0981.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

P52303 AP-1 complex subunit beta-14.4e-0750Show/hide
Query:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNE
        P + LQVAVKNN   V+YF+    +H+ F EDG M+R  FL TW+ +P+ NE
Subjt:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNE

P52303 AP-1 complex subunit beta-11.2e-0465.62Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP
        V  +L+ AT ++D+PDLR R YIYWRLLSTDP
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP

Q08DS7 AP-1 complex subunit beta-15.8e-0750.94Show/hide
Query:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEV
        P + LQVAVKNN   V+YF+  I +++ F EDG MER  FL TW+ +P+ NE+
Subjt:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEV

Q08DS7 AP-1 complex subunit beta-11.2e-0465.62Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP
        V  +L+ AT ++D+PDLR R YIYWRLLSTDP
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP

Q10567 AP-1 complex subunit beta-13.4e-0751.92Show/hide
Query:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNE
        P + LQVAVKNN   V+YF+    +HI F EDG M+R  FL TW+ +P+ NE
Subjt:  PSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNE

Q10567 AP-1 complex subunit beta-11.2e-0465.62Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP
        V  +L+ AT ++D+PDLR R YIYWRLLSTDP
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDP

Q9SUS3 Beta-adaptin-like protein B8.6e-2768.29Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P V+FQNMS GPPSSLLQVAVKNNQ PVWYF DKI +H  F EDG MER  FLETWRSLPDSNEV ++F  I I +V++ ++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

Q9SUS3 Beta-adaptin-like protein B8.1e-0981.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

Arabidopsis top hitse value%identityAlignment
AT4G11380.1 Adaptin family protein6.1e-2868.29Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P V+FQNMS GPPSSLLQVAVKNNQ PVWYF DKI +H  F EDG MER  FLETWRSLPDSNEV ++F  I I +V++ ++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

AT4G11380.1 Adaptin family protein5.7e-1081.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

AT4G11380.2 Adaptin family protein6.1e-2868.29Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P V+FQNMS GPPSSLLQVAVKNNQ PVWYF DKI +H  F EDG MER  FLETWRSLPDSNEV ++F  I I +V++ ++
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

AT4G11380.2 Adaptin family protein5.7e-1081.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE

AT4G23460.1 Adaptin family protein3.1e-2462.2Show/hide
Query:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD
        P V+ QNMS G  SS+LQVAVKNNQ PVWYF DKI ++  F+EDG MER  FLETW+SLPDSNEV ++F  I I +V++ +D
Subjt:  PEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNFLETWRSLPDSNEVSRDFSTILINNVDAIVD

AT4G23460.1 Adaptin family protein5.7e-1081.82Show/hide
Query:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE
        +  +LNNATVETD+PDLR RAYIYWRLLSTDPE
Subjt:  VVALLNNATVETDDPDLRYRAYIYWRLLSTDPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGAAAGGCAGATTTGCATGAACAGCAATGTAACAATGTTGAATTGGCATTTAACTGGATATTTGATAGAAACTCGGTTGTTGCTCTTTTGAATAATGCTACTGT
GGAGACGGATGATCCTGATTTGCGTTATCGTGCGTATATCTATTGGCGTCTCCTATCGACTGATCCAGAGGTTGTGTTCCAAAACATGTCTCAAGGTCCTCCAAGCTCAC
TTTTGCAGGTAGCTGTGAAGAACAATCAACATCCAGTGTGGTATTTCAATGATAAAATTTCTATGCACATTTTCTTTGCCGAGGATGGGACGATGGAGCGTACAAACTTT
CTCGAGACTTGGAGGTCCCTTCCAGATTCGAATGAAGTTTCTAGAGATTTTTCGACCATTCTTATAAACAATGTTGACGCCATTGTCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGAAAGGCAGATTTGCATGAACAGCAATGTAACAATGTTGAATTGGCATTTAACTGGATATTTGATAGAAACTCGGTTGTTGCTCTTTTGAATAATGCTACTGT
GGAGACGGATGATCCTGATTTGCGTTATCGTGCGTATATCTATTGGCGTCTCCTATCGACTGATCCAGAGGTTGTGTTCCAAAACATGTCTCAAGGTCCTCCAAGCTCAC
TTTTGCAGGTAGCTGTGAAGAACAATCAACATCCAGTGTGGTATTTCAATGATAAAATTTCTATGCACATTTTCTTTGCCGAGGATGGGACGATGGAGCGTACAAACTTT
CTCGAGACTTGGAGGTCCCTTCCAGATTCGAATGAAGTTTCTAGAGATTTTTCGACCATTCTTATAAACAATGTTGACGCCATTGTCGACTGACTGGCTGCAACGAACAT
GTTCTTGATTGTCAAAACAAAGCATGCGAACCAGGATGTTTTCTACTTCTCTACAAAATTCCTCAGAGGAATCCCTTTGTT
Protein sequenceShow/hide protein sequence
MLGKADLHEQQCNNVELAFNWIFDRNSVVALLNNATVETDDPDLRYRAYIYWRLLSTDPEVVFQNMSQGPPSSLLQVAVKNNQHPVWYFNDKISMHIFFAEDGTMERTNF
LETWRSLPDSNEVSRDFSTILINNVDAIVD