; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27156 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27156
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomeobox protein knotted-1-like LET6
Genome locationCarg_Chr11:12047728..12051557
RNA-Seq ExpressionCarg27156
SyntenyCarg27156
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589145.1 Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia]8.2e-16298.62Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDHN    NNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

KAG7022846.1 Homeobox protein SBH1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-165100Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

XP_022930731.1 homeobox protein knotted-1-like LET6 [Cucurbita moschata]3.1e-16197.93Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDH  NNDNNNDSDSNN+KMFLPYNDHV++CR KLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

XP_022988875.1 homeobox protein knotted-1-like LET6 [Cucurbita maxima]4.0e-16197.93Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDHN    NNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

XP_023529301.1 homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo]2.6e-16097.25Show/hide
Query:  MDRGLIMFDHNNN-NDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEA
        MDRGLIMFDHNNN +DNNNDSDSNN+KMFLPYNDH ++CRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTV RGDDPGLDQFMEA
Subjt:  MDRGLIMFDHNNN-NDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEA

Query:  YCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNG
        YCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYL SLKQEFLKKKKNG
Subjt:  YCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNG

Query:  KLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        KLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  KLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

TrEMBL top hitse value%identityAlignment
A0A0A0K5G5 Uncharacterized protein8.3e-12881.94Show/hide
Query:  NNNNDNNNDSDSNNRKMFLPY------NDHV----ETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        +NNN+NNN         FLP       NDHV     T +AK+MAHPLFPRLL +YVNCQKVGAPP+VVARLEQAC VA G+CR    G+DP LDQFMEAY
Subjt:  NNNNDNNNDSDSNNRKMFLPY------NDHV----ETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEML+KYEQELTKPFKEAM+FFSRIESQLKA A    SSDG+ELVGQNECSKEIE VDMNENYIDPQAE KELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSST
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKP+EDMQFVVMDA HPHYYLDN+ICNPFSMDCSS+
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSST

A0A1S3C0Z5 homeobox protein knotted-1-like LET67.8e-12680Show/hide
Query:  NNNNDNNNDSDSNNRKMFLPY------NDH----VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        +NNN+NNN         FLP       NDH      T +AK+MAHPLFPRLL +YVNCQKVGAPP+VVARLEQAC VA G+CR    G+DP LDQFMEAY
Subjt:  NNNNDNNNDSDSNNRKMFLPY------NDH----VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEML+KYEQELTKPFKEAM+FFSRIESQLKA A    SSDG++LV QN+CSKEIE VDMNENYIDPQAE KELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKP+EDMQFVVMD  HPHYYLDN+ICNPFSMDCSS+ F
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

A0A6J1C313 homeobox protein SBH1-like1.2e-13181.06Show/hide
Query:  MFDHNNNNDNNN---------DSDSNNRKMFLPYNDH-------VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDD
        + D+NNNN NN           S +     F+P   H         +CRAK+MAHPLFPRLLA+YVNCQKVGAPP+VVARLEQAC VA G+CR  ARGDD
Subjt:  MFDHNNNNDNNN---------DSDSNNRKMFLPYNDH-------VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDD

Query:  PGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQ
        P LDQFMEAYCEMLSKYEQEL+KPFKEAM+FFSRIESQLKALA SSS+SDG ELVGQ+ECSKE+E VDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQ
Subjt:  PGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQ

Query:  EFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC-NPFSMDCSSTL
        EFLKKKKNGKLPKEARQ+LLDWWSRHYKWPYPSE+QKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDN+IC NPFSMDCSSTL
Subjt:  EFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC-NPFSMDCSSTL

Query:  F
        F
Subjt:  F

A0A6J1ERR4 homeobox protein knotted-1-like LET61.5e-16197.93Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDH  NNDNNNDSDSNN+KMFLPYNDHV++CR KLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

A0A6J1JKT8 homeobox protein knotted-1-like LET62.0e-16197.93Show/hide
Query:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
        MDRGLIMFDHN    NNNDSDSNN+KMFLPYNDHV+TCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY
Subjt:  MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAY

Query:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
        CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK
Subjt:  CEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGK

Query:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
        LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF
Subjt:  LPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF

SwissProt top hitse value%identityAlignment
O22299 Homeobox protein knotted-1-like LET61.1e-10063.39Show/hide
Query:  DNNNDSDSNNRKMFLPY-------------NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR------GDDPGLDQ
        +NNN   SNN  +FLP+             N    + ++K+MAHP + RLL +Y+NCQK+GAPP+VVARLE+ C  +A   R+ +       G+DP LDQ
Subjt:  DNNNDSDSNNRKMFLPY-------------NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR------GDDPGLDQ

Query:  FMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYEL-VGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLK
        FMEAYCEML+KYEQEL+KPFKEAMVF SRIE Q KAL  + +SS    L    +      E VD+N ++IDPQAE++ELKGQLLRKYSGYLGSLKQEF+K
Subjt:  FMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSSSSDGYEL-VGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLK

Query:  KKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTL
        K+K GKLPKEARQQL+DWW RH KWPYPSESQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DN++ N F MD + +L
Subjt:  KKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTL

O65034 Homeobox protein knotted-1-like 124.6e-7557.25Show/hide
Query:  ETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGD--DPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALA
        E+ +AK+MAHP +  LLA+Y++CQKVGAPP+V+ RL    T A  + R   R D  DP LDQFMEAYC ML+KY +ELT+P  EAM F  R+ESQL  +A
Subjt:  ETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGD--DPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALA

Query:  ASSSS----------SDG-YELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYP
          +            +DG  E VG +E   +    +     IDP+AE+KELK QLL+KYSGYL SL+QEF KKKK GKLPKEARQ+LL WW  HYKWPYP
Subjt:  ASSSS----------SDG-YELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYP

Query:  SESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMD
        SE++K+ALAESTGLD KQINNWFINQRKRHWKPSEDM FV+M+  HP       +  PF  D
Subjt:  SESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMD

P46608 Homeobox protein SBH11.2e-9963.31Show/hide
Query:  HNNNNDNNNDSDSNNRKMFLPY----NDH------------------VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQAC----TVAAGNCR
        HNN+N+N  D D NN    L Y    +DH                      +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC    T+A G+  
Subjt:  HNNNNDNNNDSDSNNRKMFLPY----NDH------------------VETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQAC----TVAAGNCR

Query:  TVAR--GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSS---SSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLL
          +   G+DP LDQFMEAYCEML+KYEQEL+KP KEAM+F  RIE Q K L  SSS   S++G +  G +E     E VD++ N IDPQAE+++LKGQLL
Subjt:  TVAR--GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAASSS---SSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLL

Query:  RKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC
        RKYSGYLGSLKQEF+KK+K GKLPKEARQQLL+WW+RHYKWPYPSESQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMD +HPHYY+DN++ 
Subjt:  RKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLIC

Query:  NPFSMDCS
        NPF MD S
Subjt:  NPFSMDCS

Q38874 Homeobox protein SHOOT MERISTEMLESS4.4e-10272.31Show/hide
Query:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA
        +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLDQFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ 
Subjt:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA

Query:  SSSSS-DGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA
        SS SS  GY    + +N      E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWWSRHYKWPYPSE QK+ALA
Subjt:  SSSSS-DGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA

Query:  ESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD-CSSTL
        ESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP HY++DN++ NPF MD  SST+
Subjt:  ESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD-CSSTL

Q9M6D9 Homeobox protein SHOOT MERISTEMLESS4.6e-9970.75Show/hide
Query:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA
        +AK+MAHP + RLL +YVNCQKVGAPP+V ARLE+ C+ AA        T + G+DPGLDQFMEAYCEML KYEQEL+KPFKEAMVF   +E Q K+L+ 
Subjt:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA

Query:  SSSSSDGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAE
        SS SS GY    + +N      E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWWSRHYKWPYPSE QK+ALAE
Subjt:  SSSSSDGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAE

Query:  STGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD
        STGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP HY++ N++ NPF +D
Subjt:  STGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 63.9e-6147.43Show/hide
Query:  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ--------ACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFS
        N  +   +AK+  HP +PRLL +Y++CQKVGAPP++   LE+           V   +C     G DP LD+FME YC++L KY+ +L +PF EA  F +
Subjt:  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQ--------ACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFS

Query:  RIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPY
        +IE QL+ L     S+ G    G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK GKLP+EARQ LLDWW+ HYKWPY
Subjt:  RIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPY

Query:  PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD
        P+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M F +MD +   ++ +
Subjt:  PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD

AT1G23380.2 KNOTTED1-like homeobox gene 61.3e-5947.06Show/hide
Query:  NDHVETCRAKLMAHPLFPRLLASYVNCQK--VGAPPDVVARLEQ--------ACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVF
        N  +   +AK+  HP +PRLL +Y++CQK  VGAPP++   LE+           V   +C     G DP LD+FME YC++L KY+ +L +PF EA  F
Subjt:  NDHVETCRAKLMAHPLFPRLLASYVNCQK--VGAPPDVVARLEQ--------ACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVF

Query:  FSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKW
         ++IE QL+ L     S+ G    G     +E+   D +E   D   + E+++LK +LLRK+   + +LK EF KKKK GKLP+EARQ LLDWW+ HYKW
Subjt:  FSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYID--PQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKW

Query:  PYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD
        PYP+E  K+ALA++TGLD KQINNWFINQRKRHWKPSE+M F +MD +   ++ +
Subjt:  PYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD

AT1G62360.1 KNOX/ELK homeobox transcription factor3.1e-10372.31Show/hide
Query:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA
        +AK+MAHP + RLLA+YVNCQKVGAPP+VVARLE+AC+ AA        T   G+DPGLDQFMEAYCEML KYEQEL+KPFKEAMVF  R+E Q K+L+ 
Subjt:  RAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCR----TVARGDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIESQLKALAA

Query:  SSSSS-DGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA
        SS SS  GY    + +N      E VDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWWSRHYKWPYPSE QK+ALA
Subjt:  SSSSS-DGY--ELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA

Query:  ESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD-CSSTL
        ESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HP HY++DN++ NPF MD  SST+
Subjt:  ESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-HYYLDNLICNPFSMD-CSSTL

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 25.1e-6147.58Show/hide
Query:  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR----GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIES
        N  +   ++K+ +HPL+PRLL +Y++CQKVGAP ++   LE+         R VA     G DP LD+FME YC++L KY+ +L +PF EA  F ++IE 
Subjt:  NDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVAR----GDDPGLDQFMEAYCEMLSKYEQELTKPFKEAMVFFSRIES

Query:  QLKALAASSSSSDGYELVGQNECSKEI-EVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQ
        QL+ L    +S+      G     +E+ E  D+  +    ++ +++LK QLLRK+  ++ SLK EF KKKK GKLP+EARQ LLDWW+ H KWPYP+E  
Subjt:  QLKALAASSSSSDGYELVGQNECSKEI-EVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQ

Query:  KVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD
        K++LAE TGLD KQINNWFINQRKRHWKPSE+M F +MD ++  ++ +
Subjt:  KVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLD

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana3.4e-7354.04Show/hide
Query:  HNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQA-----CTVAAGNCRTVARGDDPGLDQFMEAYCEML
        HN    NNN++D+ +          VE  +AK++AHP +  LL +Y++CQK+GAPPDVV R+  A                A   DP LDQFMEAYC+ML
Subjt:  HNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQA-----CTVAAGNCRTVARGDDPGLDQFMEAYCEML

Query:  SKYEQELTKPFKEAMVFFSRIESQLKALAAS-----------SSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFL
         KY +ELT+P +EAM F  RIESQL  L  S           S +    +   +N    E E+ +     IDP+AE++ELK  LL+KYSGYL SLKQE  
Subjt:  SKYEQELTKPFKEAMVFFSRIESQLKALAAS-----------SSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFL

Query:  KKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPHY---YLD
        KKKK GKLPKEARQ+LL WW  HYKWPYPSES+KVALAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMD   HPH+   Y+D
Subjt:  KKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPHY---YLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGTGGCTTGATCATGTTCGATCATAACAACAACAACGACAACAACAACGACAGCGATAGCAACAACAGGAAGATGTTTTTGCCTTACAATGATCATGTTGAAAC
TTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGGTGCGCCGCCGGATGTGGTGGCGAGGTTAGAACAGG
CTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGAGTAAATATGAACAAGAG
CTTACTAAGCCTTTTAAAGAAGCTATGGTGTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCCTCTTCTTCTTCGGATGGTTATGAGCTGGTCGGGCA
AAACGAGTGTTCGAAGGAGATCGAGGTTGTCGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATATAGCGGAT
ACCTCGGTAGCCTAAAGCAAGAGTTTCTCAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGCTGCTTGACTGGTGGAGTAGACACTACAAATGGCCA
TATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGACTGGACTTGAAGCAGATCAATAATTGGTTCATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGA
GGACATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTCAATGGACTGTTCTTCCACTCTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATACCTTTATTCCCATCAATCTCACCACTTCTGGTTATCCATTTTGATCCCTCTTCATCCCTCCACTCACACTCCTTCCCCTTCTCCTCCTCCAATTCCTCTCTCT
AAATCCCAGTCAGAACCAATAAAACAAAATTAACTCACACCCATGGTGCATTGAACGAGGTTGTTCCATTCCACTTCTCCATCTCCTTGGAAACCCAACAATAAAGGGTT
CATAGGGTTTGTTCCTACCACTGTTTTTGTGTAGCGATTGACATCTGCCCGTGTGACAATAACCCCCCCAAGTACGACCAAAAACACCCTCTTTTACTGTGTCTCTTGAG
CTTAAATAGCGGGTGAAAAGGTTAGCCATACCATCATGGACCGTGGCTTGATCATGTTCGATCATAACAACAACAACGACAACAACAACGACAGCGATAGCAACAACAGG
AAGATGTTTTTGCCTTACAATGATCATGTTGAAACTTGTAGAGCTAAACTTATGGCTCATCCGTTGTTTCCTCGTCTATTGGCTTCCTATGTGAATTGTCAGAAGGTGGG
TGCGCCGCCGGATGTGGTGGCGAGGTTAGAACAGGCTTGTACGGTGGCTGCTGGGAATTGTAGGACGGTGGCACGTGGGGATGATCCGGGGTTGGATCAGTTCATGGAGG
CTTATTGTGAGATGTTGAGTAAATATGAACAAGAGCTTACTAAGCCTTTTAAAGAAGCTATGGTGTTCTTTTCGAGGATTGAGTCTCAGCTTAAAGCCCTAGCTGCTTCC
TCTTCTTCTTCGGATGGTTATGAGCTGGTCGGGCAAAACGAGTGTTCGAAGGAGATCGAGGTTGTCGATATGAACGAAAACTACATCGACCCACAAGCCGAAGAGAAGGA
ACTCAAAGGCCAACTTCTACGCAAATATAGCGGATACCTCGGTAGCCTAAAGCAAGAGTTTCTCAAGAAGAAGAAGAATGGGAAGTTGCCTAAAGAAGCTCGGCAGCAGC
TGCTTGACTGGTGGAGTAGACACTACAAATGGCCATATCCATCGGAGTCGCAAAAGGTGGCGTTGGCCGAGTCGACGGGACTGGACTTGAAGCAGATCAATAATTGGTTC
ATTAACCAAAGGAAGCGCCATTGGAAGCCATCGGAGGACATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGATAATCTTATATGCAATCCATTCTC
AATGGACTGTTCTTCCACTCTCTTCTGATTACATATCATTTTAATGTTGGTTTGTTTATGTTCTAACTCATGTTCATTATGTTTTGAATTGTTCTACATGTTGAACTCAA
ACCCTTTCTCTTGATTCTTGGTTTAGGGTTCTTGTATTGTATGCGTTTGTTTTAGTACTAATTTAGCTCGGTTCACATTGTTTAACTTTTCGAAGTTTTATTTTTAAAGT
ACAATAGAAAATCTCGTTTCTTGATCATCTGTAGTGCTCTATGTTTCAGATCTGGATTCGATATCTGTATGCTCTTAACATTCTGCTGCATTTCCAGTGATATGGTCATA
TTACTTGGTTCTCGCTTCATATGAGACTCGATCTTAATTCTGAGTGAGATATAAACTTTTGGGGCGTGAAGCTTATTCTTTGATCTATATATGTGAGAGTGACTTTTATA
GTCGATTCAATAAGCTTACCATTTTAGCGATTTGACAAAATAGGACGTTGGAAACATAATTTCACGAGATAAAATTCACTCATTTTTATACAGGGTTGAGTAGATGACT
Protein sequenceShow/hide protein sequence
MDRGLIMFDHNNNNDNNNDSDSNNRKMFLPYNDHVETCRAKLMAHPLFPRLLASYVNCQKVGAPPDVVARLEQACTVAAGNCRTVARGDDPGLDQFMEAYCEMLSKYEQE
LTKPFKEAMVFFSRIESQLKALAASSSSSDGYELVGQNECSKEIEVVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWP
YPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNLICNPFSMDCSSTLF