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Carg27162 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27162
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 12
Genome locationCarg_Chr04:14012426..14012683
RNA-Seq ExpressionCarg27162
SyntenyCarg27162
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3958485.1 hypothetical protein CMV_016625 [Castanea mollissima]8.6e-1147.83Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPH------PQPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I  IT+S +  SNHPL TRK LAS+ DFTPF  H       Q  + + H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPH------PQPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]9.4e-42100Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-42100Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

XP_023903065.1 CLAVATA3/ESR (CLE)-related protein 12 [Quercus suber]2.3e-1150Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I  IT+S +  SNHPL TRK LAS+ DFTPF  H Q  + ++  H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

XP_027365548.1 CLAVATA3/ESR (CLE)-related protein 12 [Abrus precatorius]1.5e-1054.67Show/hide
Query:  YSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKL--EPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +S  S+HP  +RK LASK DFTPFF H   ++  KH  P V +  +PPD+   ++DP YGVEKRRVP GPNPLH+
Subjt:  YSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKL--EPPDSAADDVDPLYGVEKRRVPNGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein2.0e-2166.28Show/hide
Query:  MNCKSIPNITFS-YSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MN +  P ITFS YSSSSNHPL TRK L SKVDFTPFF H  PN+PRKHS P       + A  D+DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSIPNITFS-YSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

A0A2N9J7P0 Uncharacterized protein1.7e-1250Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I  +T+S  S  +HPL TRK LASK DFTPF  H Q  + ++  HS+ +  +   P+ A  ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

A0A2P5ENB6 CLAVATA3/ESR (CLE)-related protein4.6e-1047.87Show/hide
Query:  SIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPH---------PQPNRPRKHSRPAVKLEPPDSAADD----VDPLYGVEKRRVPNGPNPLHN
        SI  +T+S  S++ HPL TRK LAS  DFTPF  H          Q ++ R+ S P +     D AA D    +DP YGVEKRRVP GPNPLH+
Subjt:  SIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPH---------PQPNRPRKHSRPAVKLEPPDSAADD----VDPLYGVEKRRVPNGPNPLHN

A0A7N2KK79 Uncharacterized protein7.6e-1351.16Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I  IT+S +  SNHPL TRK LAS+ DFTPF  H Q  + + H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

V7BG00 Uncharacterized protein7.1e-1156.34Show/hide
Query:  SSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        SSS+H L  RK LA+K DF+PFF H       KH +P V +  PD +  D+DP YGVEKRRVP GPNPLH+
Subjt:  SSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

SwissProt top hitse value%identityAlignment
Q29PU4 CLAVATA3/ESR (CLE)-related protein 129.2e-0845.59Show/hide
Query:  NHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        ++ L +RK L+ + DFTPF  H + N    H R   + +      D++DP YGVEKRRVP+GPNPLH+
Subjt:  NHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 131.2e-0446.03Show/hide
Query:  RKELASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R+ LA K  DFTPF    + +  RK + PA           ++DP YGVEKR VP+GPNPLH+
Subjt:  RKELASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

Q9FZE4 CLAVATA3/ESR (CLE)-related protein 98.1e-0452.38Show/hide
Query:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R  + SR    L PP     ++DP YGV+KR VP+GPNPLHN
Subjt:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 95.7e-0552.38Show/hide
Query:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R  + SR    L PP     ++DP YGV+KR VP+GPNPLHN
Subjt:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G68795.1 CLAVATA3/ESR-RELATED 126.6e-0945.59Show/hide
Query:  NHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        ++ L +RK L+ + DFTPF  H + N    H R   + +      D++DP YGVEKRRVP+GPNPLH+
Subjt:  NHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G69320.1 CLAVATA3/ESR-RELATED 103.7e-0450Show/hide
Query:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R H      L  P     ++D  YGVEKR VP+GPNPLHN
Subjt:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G73965.1 CLAVATA3/ESR-RELATED 138.9e-0646.03Show/hide
Query:  RKELASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R+ LA K  DFTPF    + +  RK + PA           ++DP YGVEKR VP+GPNPLH+
Subjt:  RKELASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGAACTGGCTAGCAAGGTTGACTTCACTCCCTTTTT
TCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGC
GGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGAACTGGCTAGCAAGGTTGACTTCACTCCCTTTTT
TCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGC
GGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
Protein sequenceShow/hide protein sequence
MNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN