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Carg27164 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27164
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnudix hydrolase 1-like
Genome locationCarg_Chr04:14107247..14107923
RNA-Seq ExpressionCarg27164
SyntenyCarg27164
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0005829 - cytosol (cellular component)
GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (molecular function)
GO:0019177 - dihydroneopterin triphosphate pyrophosphohydrolase activity (molecular function)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601762.1 Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-8399.34Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+CGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

KAG7032485.1 Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-84100Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

XP_022930097.1 nudix hydrolase 1-like [Cucurbita moschata]4.3e-8298.01Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        MENPVEAAAA VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+CGVREVKEETGLDIEKTEFLT TNNPFVNDPKPSHYVVIFM
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

XP_022974207.1 nudix hydrolase 1-like [Cucurbita maxima]2.1e-7696.45Show/hide
Query:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
        PVPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF++CGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
Subjt:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ

Query:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKM+KSGFNPFPV
Subjt:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

XP_023550111.1 nudix hydrolase 1-like [Cucurbita pepo subsp. pepo]6.5e-7899.29Show/hide
Query:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
        PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+CGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
Subjt:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ

Query:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Subjt:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

TrEMBL top hitse value%identityAlignment
A0A1S3CT01 nudix hydrolase 1-like3.5e-6982.78Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        ME      A PVPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFE+C VREVKEETGLDIEKTEFLTVTN PF+NDPKPSHYV I M
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDP Q PQNLEP+KC GWDWYDWD LP+PLFWP+EKMV+SGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

A0A5D3BLX3 Nudix hydrolase 1-like3.5e-6982.78Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        ME      A PVPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFE+C VREVKEETGLDIEKTEFLTVTN PF+NDPKPSHYV I M
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDP Q PQNLEP+KC GWDWYDWD LP+PLFWP+EKMV+SGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

A0A6J1DTS6 nudix hydrolase 1-like1.8e-7083.44Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        ME       APVPRV VVVYILKG SVLLGRRLSS+GDSSH+TFALPGGHLEFGE+F++C VREVKEETGLDIEKTEFLTVTNNPF+NDPKPSHYV IFM
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RA LSD  QQPQNLEPSKCGGWDWYDW  LP+PLFWPL+KMV+SGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

A0A6J1EPE6 nudix hydrolase 1-like2.1e-8298.01Show/hide
Query:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM
        MENPVEAAAA VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+CGVREVKEETGLDIEKTEFLT TNNPFVNDPKPSHYVVIFM
Subjt:  MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFM

Query:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Subjt:  RAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

A0A6J1I9N4 nudix hydrolase 1-like1.0e-7696.45Show/hide
Query:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
        PVPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF++CGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
Subjt:  PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ

Query:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
        PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKM+KSGFNPFPV
Subjt:  PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

SwissProt top hitse value%identityAlignment
M4I1C6 Geranyl diphosphate phosphohydrolase2.4e-5163.76Show/hide
Query:  ENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMR
        E  V A  A   +V VVV +L+G++VLLGRR SS GDS   TF+LP GHLEFGESFE+C  RE+KEET LDI K E LTVTNN F+++ KPS YV +FMR
Subjt:  ENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMR

Query:  AVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFP
        AVL+DP Q+PQN+EP  C GW WY+WD+LP PLFWPL+ +V+ GFNPFP
Subjt:  AVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFP

Q58549 ADP-ribose pyrophosphatase2.8e-0732.06Show/hide
Query:  PRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQ
        P V V   I K   +LL +R     +     FALPGG +E GE+ E+  VRE+KEETGL  +    L V ++P   DP+     ++F+  V+   L+   
Subjt:  PRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQ

Query:  NLEPSKCGGWDWYDWDDLPSPLFWPLEKMVK
        + + +     +++D ++LP  L +  EK++K
Subjt:  NLEPSKCGGWDWYDWDDLPSPLFWPLEKMVK

Q8BG93 Nucleotide triphosphate diphosphatase NUDT153.4e-2141.96Show/hide
Query:  PRVGVVVYILK---GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA-VLSDPL
        P VGV V +L     + VLLG+R  S G  S   F LPGGHLEFGE++E+C  RE  EE GL ++   F +V N+ FV + +  HYV I M+  V     
Subjt:  PRVGVVVYILK---GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA-VLSDPL

Query:  QQPQNLEPSKCGGWDWYDWDDLP--SPLFWPLEKMVKSGFNPF
         +P+N+EP K   W+W  W++ P    LFW L  + + G++PF
Subjt:  QQPQNLEPSKCGGWDWYDWDDLP--SPLFWPLEKMVKSGFNPF

Q9CA40 Nudix hydrolase 15.8e-5369.57Show/hide
Query:  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQP
        +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFE+C  REV EETGL IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P
Subjt:  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQP

Query:  QNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPF
        +N+EP KC GWDWYDW++LP PLFWPLEK+  SGFNPF
Subjt:  QNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT157.6e-2142.55Show/hide
Query:  VGVVVYILK-GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA---VLSDPLQQ
        VGVVV   K  + VLLG+R  S G  S   F LPGGHLEFGE++E+C  RE  EE  L ++   F +V N+ F+ + +  HYV I M+    V  D   +
Subjt:  VGVVVYILK-GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA---VLSDPLQQ

Query:  PQNLEPSKCGGWDWYDWDDLP--SPLFWPLEKMVKSGFNPF
        P+N+EP K   W+W  W++LP    LFW L  + + G++PF
Subjt:  PQNLEPSKCGGWDWYDWDDLP--SPLFWPLEKMVKSGFNPF

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 14.1e-5469.57Show/hide
Query:  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQP
        +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFE+C  REV EETGL IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P
Subjt:  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQP

Query:  QNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPF
        +N+EP KC GWDWYDW++LP PLFWPLEK+  SGFNPF
Subjt:  QNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPF

AT5G47650.1 nudix hydrolase homolog 21.7e-0425Show/hide
Query:  RVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQN
        RVG+  +++     +L  +  +        +  P G +  GE   D  VREVKEETG+D E  + L           K   + V  ++     PL    N
Subjt:  RVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQN

Query:  LEPSKCGGWDWYDWDD
         + S+     W  W++
Subjt:  LEPSKCGGWDWYDWDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCCGGTGGAAGCGGCGGCGGCGCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGG
TGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGATTGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTG
AGAAAACAGAGTTCCTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAG
CCCCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTCTGGCCTTTAGAGAAGATGGTCAAAAGTGGGTTTAA
TCCGTTTCCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCCGGTGGAAGCGGCGGCGGCGCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGG
TGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGATTGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTG
AGAAAACAGAGTTCCTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAG
CCCCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTCTGGCCTTTAGAGAAGATGGTCAAAAGTGGGTTTAA
TCCGTTTCCTGTCTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCTTGCCCTATCTTGTGTTTAGTAATGCTTTACTTATGTGAATCTGGTATCAAGCATACA
TAAAAAGGAGTTTGTAAGAATATCTACAACATTTGCATATT
Protein sequenceShow/hide protein sequence
MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDCGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQ
PQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV