| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7025200.1 Regulator of nonsense transcripts UPF3 [Cucurbita argyrosperma subsp. argyrosperma] | 9.2e-278 | 100 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYIL
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYIL
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYIL
Query: KESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGSMIRSILLNN
KESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGSMIRSILLNN
Subjt: KESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGSMIRSILLNN
Query: ESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRGVWAPRSRSD
ESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRGVWAPRSRSD
Subjt: ESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRGVWAPRSRSD
Query: ASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGHEKQVWVQKS
ASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGHEKQVWVQKS
Subjt: ASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGHEKQVWVQKS
Query: SSGS
SSGS
Subjt: SSGS
|
|
| XP_022925470.1 regulator of nonsense transcripts UPF3-like [Cucurbita moschata] | 1.1e-273 | 97.66 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQS AAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSR GDVTTTVSGR+SSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| XP_022973974.1 regulator of nonsense transcripts UPF3-like [Cucurbita maxima] | 4.9e-271 | 96.69 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSS+PRKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVG ADSGKKKILLLKGKERDISHVSDGMLQLQS TS+GTSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPN SGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSR GDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGS NPNEGKPSKRGV SGH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| XP_023535567.1 regulator of nonsense transcripts UPF3-like [Cucurbita pepo subsp. pepo] | 8.0e-274 | 97.66 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSR GDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGS NPNEGKPSKRGV SGH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| XP_038890175.1 regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida] | 2.8e-250 | 90.84 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFH+I DRF GR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGH+FVNEKGAQ+KAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKE PIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGG ASSRKPE NS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILK+SVKNTNRRDKSNFILVPRREDQ ATS GIGISDV TAD GKKKILLLKGKERDISHVSDGMLQLQSATSS TSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNE+RHGQ SS A SH KIQILNSDNGKR PR INARSGSNDMSSNEPNPSG EGDGKR DGK SKKELHGLGS +EKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSV+QSSHLLSDSVEAYRGEMKED+H SR GDVTTTVSGRNSSVENGSVRH GRRGA HVMKDDGS NPNEGKPSKRGV GH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KSY5 Smg4_UPF3 domain-containing protein | 3.3e-249 | 90.45 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSL HSDLFH+I DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQ+KAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGG ASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILK+SVKNTNRRDKSNFILVPRREDQ ATS IGISDVGTAD GKKKILLLKGKERDISHVSD MLQLQSATSSG SPASASKHN RREA G
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
+IRSILLNNE+RHGQ+SS A SHQKIQILNSDNGKR PR NARSGSND+SSNEPNPSG EGDGKR SD K SKKELHGLGS SEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIH SR GDVTT VSGRNSSVENGSVRH GRRGAGHVMKDDGS NPNEGKPSKRGV GH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X1 | 2.8e-248 | 90.06 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSL HSDLFH+I DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQ+KAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGG ASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILK+SVKNTNRRDKSNFILVPRR+DQ A S GIGISDVG AD GKKKILLLKGKERDISHVSD MLQLQSATSSG SPASASKHN RREA GS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
+IRSILLNNE+RHGQ+SS A SHQKIQILNSDNGKR PR NARSGSND+SSNEPNPSG EGDGKR D K SKKELHGLGS SEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSV+QSSHLLSDSVEAYRGEMKEDIH SR DVTT VSGRNSSVENGSVRH GRRGAGHVMKDDGS NPNEGKPSKRGV GH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| A0A6J1D8M3 regulator of nonsense transcripts UPF3 isoform X1 | 1.1e-244 | 87.91 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFH+IDDRFAGRYNWCYYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG Q+KAV+EYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGR+GTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILK+SVKNTNRRDKSNFILVPRR+DQ ATS GIGISDV TADSGKKKILLLKGKERDISHV+DGML LQSA+SSG SP +A+K NQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
+IRSILLNNE RHGQ SS + SHQKIQILNSDNGKR PR INARSGSNDMS+NEPNPSG EGDGKR + K SKKELHGLGS SEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDA VSQL+ESS++QSSHLLSDSVEA+R EMK+DIH SR GDVTTTVSGR SSVENGSVRH GRRGAGHVMKDDGS NPNEGK SKRG+ GH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| A0A6J1EI29 regulator of nonsense transcripts UPF3-like | 5.1e-274 | 97.66 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQS AAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSR GDVTTTVSGR+SSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| A0A6J1IG63 regulator of nonsense transcripts UPF3-like | 2.4e-271 | 96.69 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSS+PRKVKRGGGASSRKPESNS
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNS---
Query: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVG ADSGKKKILLLKGKERDISHVSDGMLQLQS TS+GTSPASASKHNQRREASGS
Subjt: ------YILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRREASGS
Query: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPN SGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Subjt: MIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEKRIRNKDRPDRG
Query: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSR GDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGS NPNEGKPSKRGV SGH
Subjt: VWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGSSNPNEGKPSKRGVVSGH
Query: EKQVWVQKSSSGS
EKQVWVQKSSSGS
Subjt: EKQVWVQKSSSGS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0S733 Regulator of nonsense transcripts 3A | 3.7e-19 | 37.28 | Show/hide |
Query: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSS-TKKD
+KVVIR LPPSL L ++ +++ + P S ++RAYI+F PED+ F + FDG+VF++ KG ++ AVVE+AP Q+V + KKD
Subjt: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSS-TKKD
Query: GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR
+ GTI +DP+Y FL K +A P L EI+ + +E AK T TPL+E+++ K+
Subjt: GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR
|
|
| Q10267 Nonsense-mediated mRNA decay protein 3 | 4.3e-12 | 26.95 | Show/hide |
Query: KVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSSTKKD
KV++ +LPP+LP +I+ F W + GK + + + + AY+ F V EF + GH F+++K ++A+V AP Q++P S K D
Subjt: KVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSSTKKD
Query: GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKE---------AEQSGAAKETPIVTPLMEFVRQK---RAVESGTQGSSVPRKVKRGGGASSRKP-
EG++ +DP + EF K+ + S + +E+ + AE+ A E P + V+ K R E +S K + SS+ P
Subjt: GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKE---------AEQSGAAKETPIVTPLMEFVRQK---RAVESGTQGSSVPRKVKRGGGASSRKP-
Query: ESNSYILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTAD---SGKKKI
ES + ++KE + ++ K P + A+ SD T + SGK+KI
Subjt: ESNSYILKESVKNTNRRDKSNFILVPRREDQLATSGGIGISDVGTAD---SGKKKI
|
|
| Q9BZI7 Regulator of nonsense transcripts 3B | 3.8e-16 | 26.45 | Show/hide |
Query: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSSTKK-D
+KVVIR LPP+L L ++ +++ + TS YARAYI+F ED+ F + FDG+VF++ KG ++ A+VE+AP Q+ + TKK D
Subjt: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSSTKK-D
Query: GREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYILKESV
+ GTI DP+Y +FL+ A E + S E LE EA+ + AK+T TPL+ F++ K+ + + R+++R R+ E + +E
Subjt: GREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYILKESV
Query: KNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLL-------------KGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRR--EAS
K + +P R D+L I + +K +L K K+ D ++SD QS T S + +R + S
Subjt: KNTNRRDKSNFILVPRREDQLATSGGIGISDVGTADSGKKKILLL-------------KGKERDISHVSDGMLQLQSATSSGTSPASASKHNQRR--EAS
Query: GSMIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEK-----RIRN
G R R + ++ ++ + +R + + + E E D R K E G +EK+E+ RIRN
Subjt: GSMIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSLSEKQEK-----RIRN
Query: KDRPDRGVWAPRSRSDASVSQLEESSVAQSS
KDRP ++ P +RS + ++S+ + S
Subjt: KDRPDRGVWAPRSRSDASVSQLEESSVAQSS
|
|
| Q9FVW4 Regulator of nonsense transcripts UPF3 | 2.6e-102 | 45.78 | Show/hide |
Query: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
MK+PL++ KVV+RHLPPSL SDL ID RFA RYNW +RPGK+S K+Q+Y+RAY+ F PEDV+EFA FF+GHVFVNEKGAQFKA+VEYAPSQRVP+
Subjt: MKDPLERTKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPR
Query: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGG-------------G
S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K PIVTPLMEF+RQKRA G QG S ++RGG
Subjt: SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGG-------------G
Query: ASSRKPESNSYILKESVKNTNRRDKSNFILVPRREDQLATSGG----------IGISDVG---TADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGT
S R E Y+ KES KN R+ ++ Q +SG I S G T DSGKKKILLL+ K+RD + Q ++ +
Subjt: ASSRKPESNSYILKESVKNTNRRDKSNFILVPRREDQLATSGG----------IGISDVG---TADSGKKKILLLKGKERDISHVSDGMLQLQSATSSGT
Query: SPASASKHNQRREASGSMIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSL
++ S+ NQ+ + G +I+ ILL N+SR Q+S+ S Q+++ ++N KR R N R+G K+ H G++
Subjt: SPASASKHNQRREASGSMIRSILLNNESRHGQTSSGAPSHQKIQILNSDNGKRLPRSINARSGSNDMSSNEPNPSGLEGDGKRPSDGKPSKKELHGLGSL
Query: SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGS
SEKQE+R RNKDRPDR +WAP R D S Q S+ GE+K+ + R+G+V + G ++ENGS RH RR G K++
Subjt: SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVAQSSHLLSDSVEAYRGEMKEDIHVSRAGDVTTTVSGRNSSVENGSVRHGGRRGAGHVMKDDGS
Query: SNPNEGKPSKRGVVSG---HEKQVWVQKSSSGS
EGK S+RG G HEKQ+W+QK SSG+
Subjt: SNPNEGKPSKRGVVSG---HEKQVWVQKSSSGS
|
|
| Q9H1J1 Regulator of nonsense transcripts 3A | 7.1e-15 | 28.64 | Show/hide |
Query: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSS-TKKD
+KVVIR LPP L L + R +++ + S Y+RAYI+F P+D+ F + FDG++F++ KG ++ AVVE+AP Q++ + KKD
Subjt: TKVVIRHLPPSLPHSDLFHNIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQFKAVVEYAPSQRVPRSS-TKKD
Query: GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYILKESVKN
+ G+I DP+Y +FL+ E SA + E E TPL+E+++ ++ + ++++ R+ E L+E K
Subjt: GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGGASSRKPESNSYILKESVKN
Query: TNRRDK
R ++
Subjt: TNRRDK
|
|
