; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27180 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27180
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:12195569..12197232
RNA-Seq ExpressionCarg27180
SyntenyCarg27180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7027234.1 unnamed protein product [Microthlaspi erraticum]6.7e-0741.38Show/hide
Query:  RRR---RIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVEN
        RRR   R +  S + S+ +++FD+REKT+ ++ VSLD    FR  +R AGD D AE++  +    V++N D+D  V + S V DVEN
Subjt:  RRR---RIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVEN

GER32639.1 hypothetical protein STAS_08719 [Striga asiatica]1.4e-0736.07Show/hide
Query:  SKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDK
        S  ++A D+RE   F++ V     V+         D D  EK AA +G  VV+  ++   VG    V D E E+L+P R+EI   G  P  L  +VD   
Subjt:  SKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDK

Query:  GVGR-VAVLGHKVAGVEDLYNE
        G GR +AVLGH+V G+ +L+ +
Subjt:  GVGR-VAVLGHKVAGVEDLYNE

KAB8097662.1 hypothetical protein EE612_026448, partial [Oryza sativa]1.2e-0829.19Show/hide
Query:  TAILLLMGGWSPPMRTLDFALELSIRVAIGCG----HLNSVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWV
        T  L+++GG +  +R     L L +R+++G G     +  +GG      V             + GS  RR R ++  ++ S+ ++A D  E+   ++ V
Subjt:  TAILLLMGGWSPPMRTLDFALELSIRVAIGCG----HLNSVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWV

Query:  SLDVSVLFRTGHRHAGDSDTAEKIAAVAGF-----PVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDL-DKGVGRVAVLGHKVA
        +L+  VL   G   +GD+D AE+     G       +V++ D+DG  GE   V DVE+E ++P R  IG  G   L L  ++ L ++  G  AVLG K+ 
Subjt:  SLDVSVLFRTGHRHAGDSDTAEKIAAVAGF-----PVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDL-DKGVGRVAVLGHKVA

Query:  GVEDLYNEL
         V+ L+  L
Subjt:  GVEDLYNEL

KAG6592392.1 hypothetical protein SDJN03_14738, partial [Cucurbita argyrosperma subsp. sororia]5.8e-8397.67Show/hide
Query:  MEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEIL
        MEWKGSFE+GSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEIL
Subjt:  MEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEIL

Query:  IPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE
        IPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQ+  KKKKKKKKKKKKKEE
Subjt:  IPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE

KAG7025207.1 hypothetical protein SDJN02_14030, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-154100Show/hide
Query:  MNGRWRLYQRASGSFVDSILCGTSRDGTITLPRISAVPLSSTVMMMKSSNGSGATNISSSFQTGRTAILLLMGGWSPPMRTLDFALELSIRVAIGCGHLN
        MNGRWRLYQRASGSFVDSILCGTSRDGTITLPRISAVPLSSTVMMMKSSNGSGATNISSSFQTGRTAILLLMGGWSPPMRTLDFALELSIRVAIGCGHLN
Subjt:  MNGRWRLYQRASGSFVDSILCGTSRDGTITLPRISAVPLSSTVMMMKSSNGSGATNISSSFQTGRTAILLLMGGWSPPMRTLDFALELSIRVAIGCGHLN

Query:  SVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDID
        SVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDID
Subjt:  SVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDID

Query:  GGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE
        GGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE
Subjt:  GGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE

TrEMBL top hitse value%identityAlignment
A0A0A0KSX0 Uncharacterized protein1.5e-5267.9Show/hide
Query:  KGSFEMGSLWRR----------RRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVG
        +G FEMG LW R          RRIIIV+ IHSK NIAFDMREK TF+KWVSL++S LFR  HRHAGDS+TAEKI AVAGFP+VINH+IDG VG++ RVG
Subjt:  KGSFEMGSLWRR----------RRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVG

Query:  DVENEILIPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQR
        DVE E+LIP RIEI ++G S LFLV K++LDKG GRVAV GH+VAGVED Y ELGH   K R
Subjt:  DVENEILIPARIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQR

A0A0P0WH06 Os04g0691750 protein (Fragment)5.9e-0929.19Show/hide
Query:  TAILLLMGGWSPPMRTLDFALELSIRVAIGCG----HLNSVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWV
        T  L+++GG +  +R     L L +R+++G G     +  +GG      V             + GS  RR R ++  ++ S+ ++A D  E+   ++ V
Subjt:  TAILLLMGGWSPPMRTLDFALELSIRVAIGCG----HLNSVGGGATDAAVAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWV

Query:  SLDVSVLFRTGHRHAGDSDTAEKIAAVAGF-----PVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDL-DKGVGRVAVLGHKVA
        +L+  VL   G   +GD+D AE+     G       +V++ D+DG  GE   V DVE+E ++P R  IG  G   L L  ++ L ++  G  AVLG K+ 
Subjt:  SLDVSVLFRTGHRHAGDSDTAEKIAAVAGF-----PVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDL-DKGVGRVAVLGHKVA

Query:  GVEDLYNEL
         V+ L+  L
Subjt:  GVEDLYNEL

A0A5A7PIP9 Uncharacterized protein6.6e-0836.07Show/hide
Query:  SKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDK
        S  ++A D+RE   F++ V     V+         D D  EK AA +G  VV+  ++   VG    V D E E+L+P R+EI   G  P  L  +VD   
Subjt:  SKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLVAKVDLDK

Query:  GVGR-VAVLGHKVAGVEDLYNE
        G GR +AVLGH+V G+ +L+ +
Subjt:  GVGR-VAVLGHKVAGVEDLYNE

A0A7C9DJ16 Uncharacterized protein1.6e-1442.03Show/hide
Query:  VSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEK--IAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLV
        + QIH + NIA DMRE+ + IK V L+  V    G+ H+ + DT +K  +  ++G  V+IN D++G V EL  VGD ENE+LIP R+++   G S L LV
Subjt:  VSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEK--IAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLV

Query:  AKVDLDKGV-GRVAVLGHKVAGVEDLYNELGHRNLKQR
         KV L  G  G  AV  HKV  V   +++L  R++ +R
Subjt:  AKVDLDKGV-GRVAVLGHKVAGVEDLYNELGHRNLKQR

A0A7C9DNP1 Uncharacterized protein9.5e-1542.03Show/hide
Query:  VSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEK--IAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLV
        + QIH + NIA DMRE+ + IK V L+  V    G+ H+ + DT +K  +  ++G  V+IN D++G V EL  VGD ENE+LIP R+++   G S L LV
Subjt:  VSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEK--IAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGTSPLFLV

Query:  AKVDLDKGV-GRVAVLGHKVAGVEDLYNELGHRNLKQR
         KV L  G  G  AV  HKV  V   +++L  R++ +R
Subjt:  AKVDLDKGV-GRVAVLGHKVAGVEDLYNELGHRNLKQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCAGGGAGCTTTGTGGACTCGATTCTCTGTGGAACTTCTCGTGATGGGACGATCACTCTCCCAAGAATCTCCGCTGT
TCCTCTGTCTTCAACAGTGATGATGATGAAATCTTCAAATGGCTCGGGCGCTACAAACATCAGCTCCTCGTTCCAAACTGGCCGTACCGCAATCTTGCTGCTAATGGGGG
GCTGGTCTCCACCAATGCGTACTCTGGATTTTGCTTTGGAGCTGTCCATCCGCGTCGCCATTGGCTGTGGCCACTTGAATTCTGTCGGTGGAGGAGCCACCGACGCCGCA
GTCGCAGCCGGGGCTGCCCCTATGGAGTGGAAGGGGAGTTTCGAAATGGGCAGTTTGTGGCGGCGGCGTCGAATCATCATCGTGAGTCAGATACATTCGAAACCCAATAT
CGCCTTTGATATGAGAGAAAAGACCACGTTTATCAAGTGGGTATCTCTGGATGTTAGCGTCCTGTTCAGAACGGGGCACCGACATGCCGGAGATTCTGACACGGCCGAGA
AAATCGCGGCGGTGGCCGGATTTCCTGTCGTTATAAACCACGACATCGATGGTGGTGTTGGGGAATTGTCGAGGGTCGGTGATGTTGAAAACGAGATTCTCATTCCAGCA
AGGATTGAGATCGGTGTGTATGGTACGAGTCCTCTGTTTCTGGTTGCCAAAGTCGACCTCGACAAAGGGGTTGGCAGAGTCGCCGTCCTTGGGCATAAGGTCGCCGGCGT
CGAGGATTTGTACAACGAGCTTGGTCATCGGAATCTGAAACAGAGGAGTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCAGGGAGCTTTGTGGACTCGATTCTCTGTGGAACTTCTCGTGATGGGACGATCACTCTCCCAAGAATCTCCGCTGT
TCCTCTGTCTTCAACAGTGATGATGATGAAATCTTCAAATGGCTCGGGCGCTACAAACATCAGCTCCTCGTTCCAAACTGGCCGTACCGCAATCTTGCTGCTAATGGGGG
GCTGGTCTCCACCAATGCGTACTCTGGATTTTGCTTTGGAGCTGTCCATCCGCGTCGCCATTGGCTGTGGCCACTTGAATTCTGTCGGTGGAGGAGCCACCGACGCCGCA
GTCGCAGCCGGGGCTGCCCCTATGGAGTGGAAGGGGAGTTTCGAAATGGGCAGTTTGTGGCGGCGGCGTCGAATCATCATCGTGAGTCAGATACATTCGAAACCCAATAT
CGCCTTTGATATGAGAGAAAAGACCACGTTTATCAAGTGGGTATCTCTGGATGTTAGCGTCCTGTTCAGAACGGGGCACCGACATGCCGGAGATTCTGACACGGCCGAGA
AAATCGCGGCGGTGGCCGGATTTCCTGTCGTTATAAACCACGACATCGATGGTGGTGTTGGGGAATTGTCGAGGGTCGGTGATGTTGAAAACGAGATTCTCATTCCAGCA
AGGATTGAGATCGGTGTGTATGGTACGAGTCCTCTGTTTCTGGTTGCCAAAGTCGACCTCGACAAAGGGGTTGGCAGAGTCGCCGTCCTTGGGCATAAGGTCGCCGGCGT
CGAGGATTTGTACAACGAGCTTGGTCATCGGAATCTGAAACAGAGGAGTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGTGA
Protein sequenceShow/hide protein sequence
MNGRWRLYQRASGSFVDSILCGTSRDGTITLPRISAVPLSSTVMMMKSSNGSGATNISSSFQTGRTAILLLMGGWSPPMRTLDFALELSIRVAIGCGHLNSVGGGATDAA
VAAGAAPMEWKGSFEMGSLWRRRRIIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPA
RIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQRSMKKKKKKKKKKKKKEE