CuGenDBv2

Gene ID	Carg27183
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Genome location	Carg_Chr11:2110557..2111283
RNA-Seq Expression	Carg27183
Synteny	Carg27183
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933256.1 uncharacterized protein LOC111440241 [Cucurbita moschata]

3.1e-59

100

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGEQNNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

XP_023005576.1 uncharacterized protein LOC111498516 isoform X1 [Cucurbita maxima]

7.6e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

XP_023005584.1 uncharacterized protein LOC111498516 isoform X2 [Cucurbita maxima]

7.6e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

XP_023005591.1 uncharacterized protein LOC111498516 isoform X3 [Cucurbita maxima]

7.6e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

XP_023531367.1 uncharacterized protein LOC111793636 [Cucurbita pepo subsp. pepo]

2.0e-58

98.29

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATR+F
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGEQNNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

TrEMBL top hits

e value

%identity

Alignment

A0A6J1E1Y4 uncharacterized protein LOC111430042 isoform X1

3.3e-35

69.75

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRR HQ K  SDSP I A + LTR+SVLCLYTSNHETLLASNPSL+ SLL+EA E+D LDG AREAKRRLDERLR     R     K 
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWT--NWIAGEQNNCGQCW
        +WT  NW   EQ+ CGQCW
Subjt:  SWT--NWIAGEQNNCGQCW

A0A6J1EYJ8 uncharacterized protein LOC111440241

1.5e-59

100

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGEQNNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

A0A6J1KVD0 uncharacterized protein LOC111498516 isoform X1

3.7e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

A0A6J1KVE5 uncharacterized protein LOC111498516 isoform X3

3.7e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

A0A6J1KZN5 uncharacterized protein LOC111498516 isoform X2

3.7e-58

96.58

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF
        MAGMLPGVECARRRRLHQTKACSDSPPI ATRTLTRKS+LCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRG+ATRKF
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKF

Query:  SWTNWIAGEQNNCGQCW
        SWTNWIAGE+NNCGQCW
Subjt:  SWTNWIAGEQNNCGQCW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G15580.1 RING/U-box superfamily protein

4.3e-11

Show/hide

Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTL----------TRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDN---LDGIAREAKRRLDERLR
        MAGMLPGVECARRRR H       +PPI ++ T           TR+    LYT+NHE+  A     + S+  ++   DN   LDG A+EAK+RL++RLR
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTL----------TRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDN---LDGIAREAKRRLDERLR

AT2G15580.2 RING/U-box superfamily protein

1.5e-11

38.66

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Query:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTL----------TRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDN---LDGIAREAKRRLDERLR
        MAGMLPGVECARRRR H       +PPI ++ T           TR+    LYT+NHE+  A     + S+  ++   DN   LDG A+EAK+RL++RLR
Subjt:  MAGMLPGVECARRRRLHQTKACSDSPPIVATRTL----------TRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDN---LDGIAREAKRRLDERLR

Query:  ---KSEDKRGIATRKFSWT
           ++   + + T+  +W+
Subjt:  ---KSEDKRGIATRKFSWT

Sequences

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CDS sequence

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ATGGCCGGAATGCTTCCAGGTGTAGAGTGTGCTCGAAGAAGACGGTTACATCAAACCAAAGCATGCTCGGATTCACCGCCCATCGTCGCCACTCGGACCTTAACCAGGAA
ATCCGTTCTCTGCTTGTACACAAGCAACCACGAAACGCTCCTCGCTTCAAATCCCTCTCTGCAAGGAAGCCTGCTAGTCGAGGCACAAGAAAACGATAATCTGGACGGAA
TCGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGGAAATCAGAGGATAAAAGAGGGATAGCGACGAGAAAGTTCAGTTGGACGAATTGGATCGCCGGCGAGCAA
AACAATTGTGGTCAGTGCTGGTGA

mRNA sequence

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TCTTTCCAATCACTGAACTTAACTACCAATTCCATATCAAACCGATAAAGCCCTAGATCAGTGCAGGAACTTCAGCTTTCAAGGTTTCGCCAAGTTTCTCCCATGGCCGG
AATGCTTCCAGGTGTAGAGTGTGCTCGAAGAAGACGGTTACATCAAACCAAAGCATGCTCGGATTCACCGCCCATCGTCGCCACTCGGACCTTAACCAGGAAATCCGTTC
TCTGCTTGTACACAAGCAACCACGAAACGCTCCTCGCTTCAAATCCCTCTCTGCAAGGAAGCCTGCTAGTCGAGGCACAAGAAAACGATAATCTGGACGGAATCGCGAGA
GAGGCGAAGAGGAGATTGGACGAGCGATTGAGGAAATCAGAGGATAAAAGAGGGATAGCGACGAGAAAGTTCAGTTGGACGAATTGGATCGCCGGCGAGCAAAACAATTG
TGGTCAGTGCTGGTGATGAAGACAACTTCATTCCAGTGGCTCCTTCTTCTTCTTCTTCTT

Protein sequence

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MAGMLPGVECARRRRLHQTKACSDSPPIVATRTLTRKSVLCLYTSNHETLLASNPSLQGSLLVEAQENDNLDGIAREAKRRLDERLRKSEDKRGIATRKFSWTNWIAGEQ
NNCGQCW

Carg27183 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome