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Carg27189 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27189
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine-rich protein-related
Genome locationCarg_Chr11:2140137..2140475
RNA-Seq ExpressionCarg27189
SyntenyCarg27189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587860.1 hypothetical protein SDJN03_16425, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4698.99Show/hide
Query:  SVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS
        SVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSI AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS
Subjt:  SVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]5.4e-53100Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMNKHGTGLAVS
Subjt:  LMNKHGTGLAVS

XP_023003805.1 uncharacterized protein LOC111497277 [Cucurbita maxima]8.6e-5197.32Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MATKSRS NSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSI+AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF PRPSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMNKHGTGLAVS
Subjt:  LMNKHGTGLAVS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]1.6e-4181.25Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MA+KS S N KLQS+G SRKCLCSPTTHPGSFRCS HRNRRK SARSSSSSI AIT+AQL+LT+ AKANA+R+FLL II PSS DLQRRRNF P+PSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMN HGTGLAVS
Subjt:  LMNKHGTGLAVS

XP_023530962.1 uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]5.9e-5298.21Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTV+AKANAVRAFLLHIIRPSSNDLQRRRNFHP PSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMNKHGTGLAVS
Subjt:  LMNKHGTGLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein1.4e-3574.34Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRK-ASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRF
        MA+KS S   K  + G+SRKCLCSPTTHPGSFRCSFHRNR K +S+RSSSSS++ IT+A LEL   AKANA+R+FLL +I+PSSNDLQRRRNFHPRPSRF
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRK-ASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRF

Query:  CLMNKHGTGLAVS
        CLMN H TGLAVS
Subjt:  CLMNKHGTGLAVS

A0A6J1BZD6 uncharacterized protein LOC1110069911.0e-3375.76Show/hide
Query:  SVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS
        S  S R+CLCSPT HPGSFRCSFHRNRRK  + +SSSSI AI++AQL+L + AKANA+RAFLL II+PS ND QRRRNF+PRPSRFCLMN HGTGLAVS
Subjt:  SVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS

A0A6J1E1K3 uncharacterized protein LOC1114299443.9e-4180.36Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MA+KS S N KLQS+G SRKCLCSPTTHPGSFRCS HRNRRK SARSSSSSI AIT+AQL+LT+ AKANA+R+FL  II PSS DLQRRRNF P+PSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMN HGTGLAVS
Subjt:  LMNKHGTGLAVS

A0A6J1EG01 uncharacterized protein LOC1114339802.6e-53100Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMNKHGTGLAVS
Subjt:  LMNKHGTGLAVS

A0A6J1KSU0 uncharacterized protein LOC1114972774.1e-5197.32Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC
        MATKSRS NSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSI+AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF PRPSRFC
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFC

Query:  LMNKHGTGLAVS
        LMNKHGTGLAVS
Subjt:  LMNKHGTGLAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein3.8e-0462.96Show/hide
Query:  QSVGSSRKCLCSPTTHPGSFRCSFHRN
        Q+  +   CLCSPTTHPGSFRC  HR+
Subjt:  QSVGSSRKCLCSPTTHPGSFRCSFHRN

AT5G11090.1 serine-rich protein-related4.9e-1242.11Show/hide
Query:  SRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNK
        SR+C+CSPTTHPGSFRCS H+N      + ++S  T        A+T++ + +    +   VR  L  +IRPSS+ L+RR  + PRPSR  +M K
Subjt:  SRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNK

AT5G20370.1 serine-rich protein-related8.6e-0937.5Show/hide
Query:  SSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSI---------TAITSAQLELTVFAKANAV------------RAFLLHIIRPSSNDLQRRRNFHPR
        + RKCLCSPTTHPGSFRCSFHR      +++ +SS          T   +  L L   A  N++            R+   ++ +PSS    RR  F PR
Subjt:  SSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSI---------TAITSAQLELTVFAKANAV------------RAFLLHIIRPSSNDLQRRRNFHPR

Query:  PSRF
         SRF
Subjt:  PSRF

AT5G25280.1 serine-rich protein-related1.2e-1036.61Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF
        +A  S   ++  +   S R+C+CSPTTHPGSFRCS H+N      + ++S  T        A+T++ + +    +   VR  L  +IRPSS+ L+RR  +
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF

Query:  HPRPSRFCLMNK
         PR SR   M+K
Subjt:  HPRPSRFCLMNK

AT5G25280.2 serine-rich protein-related1.2e-1036.61Show/hide
Query:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF
        +A  S   ++  +   S R+C+CSPTTHPGSFRCS H+N      + ++S  T        A+T++ + +    +   VR  L  +IRPSS+ L+RR  +
Subjt:  MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSIT--------AITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNF

Query:  HPRPSRFCLMNK
         PR SR   M+K
Subjt:  HPRPSRFCLMNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAAAATCTAGATCCGTCAATTCCAAATTGCAGAGCGTCGGCAGTTCACGCAAGTGCCTCTGTTCTCCGACCACCCATCCCGGTTCTTTCCGCTGCAGTTTTCA
CCGGAACCGCCGCAAGGCCTCCGCTAGGTCATCGTCATCATCTATTACTGCCATTACCAGTGCGCAGTTGGAGCTTACGGTGTTCGCGAAGGCCAATGCGGTGAGGGCGT
TTCTTCTGCACATCATCAGGCCGTCCAGTAACGATCTTCAGCGGCGGAGGAATTTTCATCCCAGACCTTCCAGGTTTTGCTTGATGAACAAACACGGAACTGGATTGGCT
GTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAAAATCTAGATCCGTCAATTCCAAATTGCAGAGCGTCGGCAGTTCACGCAAGTGCCTCTGTTCTCCGACCACCCATCCCGGTTCTTTCCGCTGCAGTTTTCA
CCGGAACCGCCGCAAGGCCTCCGCTAGGTCATCGTCATCATCTATTACTGCCATTACCAGTGCGCAGTTGGAGCTTACGGTGTTCGCGAAGGCCAATGCGGTGAGGGCGT
TTCTTCTGCACATCATCAGGCCGTCCAGTAACGATCTTCAGCGGCGGAGGAATTTTCATCCCAGACCTTCCAGGTTTTGCTTGATGAACAAACACGGAACTGGATTGGCT
GTTTCTTGA
Protein sequenceShow/hide protein sequence
MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQLELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLA
VS