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Carg27199 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27199
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionComplex I-B22
Genome locationCarg_Chr02:1487388..1491395
RNA-Seq ExpressionCarg27199
SyntenyCarg27199
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6099.14Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGRE+H
Subjt:  PPSGVEIIYDYGREDH

KAG7035055.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]9.5e-61100Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_022948212.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita moschata]4.7e-6099.14Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_023007340.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita maxima]4.0e-5997.41Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALK+TLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP GVEIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]2.3e-5996.55Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVED+DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B228.1e-5893.97Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1FYY7 Complex I-B228.9e-5791.38Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1G8K3 Complex I-B222.3e-6099.14Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1J845 Complex I-B228.9e-5791.38Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1L2P5 Complex I-B221.9e-5997.41Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALK+TLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP GVEIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.0e-0934.02Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+  S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 98.7e-0934.02Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+  ++  YL      R++V  LY+RAL+   +W V R  +   A  +R RFE +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 94.9e-5281.03Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQ+ERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N++VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EI+Y+YG ED+
Subjt:  PPSGVEIIYDYGREDH

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.3e-0937.04Show/hide
Query:  RERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        +++V  LY+RAL+   +W +HR  +   A  +R RFE +KN +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  RERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q9Y6M9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.5e-0835.8Show/hide
Query:  RERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        +++V  LY+RAL+   +W V R  +   A  +R RFE +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  RERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein3.5e-5381.03Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQ+ERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F  N++VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EI+Y+YG ED+
Subjt:  PPSGVEIIYDYGREDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAGGGAGAGGGTTCGGATTCTTTACCGGCGAGCTCTCAAAGATACTCTCAACTGGGCCGTCCA
TCGTCATCTCTTTTACCGAGATGCTTCCGATCTTCGGGAGAGATTCGAGGCAAACAAGAACGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCAGGGGGTTCTAAGTTTACGCGAAACCCAACTCCACCTTCTGGGGTTGAGATAATATATGAC
TATGGACGGGAAGATCACTGA
mRNA sequenceShow/hide mRNA sequence
ACAACAACAAAGTGATTCCAAAGCCATTTCTAGAGAGAAGGAGAGAGAGATGAGCATTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAGGGAGAGGGTTC
GGATTCTTTACCGGCGAGCTCTCAAAGATACTCTCAACTGGGCCGTCCATCGTCATCTCTTTTACCGAGATGCTTCCGATCTTCGGGAGAGATTCGAGGCAAACAAGAAC
GTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCAGGGGGTTCTAA
GTTTACGCGAAACCCAACTCCACCTTCTGGGGTTGAGATAATATATGACTATGGACGGGAAGATCACTGAAATCTTCATTTTCTGGTAATGAATAAAGGTTTTTAAATGG
TTTGTTGCTTCGTCTGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTTGAATGAACACAAATCATAGTTATTCCTTGTTGATTTGCTTTCTACTTTTTCTT
AGATATGCAAATTTGGCATAGAAAAATCACCATTGGAACGGTGAATGATGTTGCAACTCTTGGTTAATTTAAGCGTTCGTTCATCATTTGCATGACATGTCTGGAGCTAT
CCCTTGTTCATTGTTGCACTGATAAAACCGGCCTTTCATTTTGACTTAACGAAACGACTTCGTTATATGTT
Protein sequenceShow/hide protein sequence
MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPSGVEIIYD
YGREDH