; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27203 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27203
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosome-binding factor A
Genome locationCarg_Chr02:1455141..1458512
RNA-Seq ExpressionCarg27203
SyntenyCarg27203
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR000238 - Ribosome-binding factor A
IPR015946 - K homology domain-like, alpha/beta
IPR020053 - Ribosome-binding factor A, conserved site
IPR023799 - Ribosome-binding factor A domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605037.1 putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-11984.41Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYVVTVPVLVQLTLICAEASVCHRRARSEGKNGSTPSSASDSK
                VIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIY                ASVCHRRARSEGKNGS PSSASDSK
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYVVTVPVLVQLTLICAEASVCHRRARSEGKNGSTPSSASDSK

XP_022948118.1 probable ribosome-binding factor A, chloroplastic [Cucurbita moschata]3.3e-11088.63Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

XP_023006992.1 probable ribosome-binding factor A, chloroplastic [Cucurbita maxima]3.4e-10785.88Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQ HHFPLKLSSSLASSRFPSQFL SPPCFCSPNSVALVR+RPVMRGATI+CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKDEKNNIDDEDME+SELSDAPQDDRDWEED+ADEDIIY+
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

XP_023534592.1 probable ribosome-binding factor A, chloroplastic [Cucurbita pepo subsp. pepo]4.8e-10987.45Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVA+VRRRPVMRG TIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKDEKNNIDDEDMEQSELSD+PQDDRDWEEDDADEDIIYV
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

XP_038900542.1 probable ribosome-binding factor A, chloroplastic [Benincasa hispida]8.8e-8775.29Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQ H  PLKLSSSL SS FPSQF AS P F SP+SV L+ R P M GATIRCMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVE+S+DLQVVKVYVSVFGDERGKD+A+AGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKD+K + DDED E SELSD  +DDRDW+ DDADEDIIYV
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX7 Uncharacterized protein1.8e-8273.02Show/hide
Query:  LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADK
        LLQQIHPQ +  PLK    L SS FPSQF AS PC  SP SV L+   PVMRGATIRCMANSRR+KMV+KQIQRELS+MLLTDKVLQFAILPEASLGADK
Subjt:  LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADK

Query:  YLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFDKAP
        YLSSLTTITDVE+S+DLQVVKVYVSVFGDERGKD+A+AGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                        
Subjt:  YLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFDKAP

Query:  VIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
             VIAILDRIKD+K +  DED +Q ELSDA  DDRDW+ DDADEDIIYV
Subjt:  VIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

A0A1S4E1P3 probable ribosome-binding factor A, chloroplastic8.0e-8674.22Show/hide
Query:  MPH-LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL
        MPH LLQQIHPQ +  PLK SSSL SS FPSQF AS PCF SP+SV L+   PVMRGATIRCMANSRRVKMV+KQIQRELS+MLLTDKVLQFAILPEASL
Subjt:  MPH-LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL

Query:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF
        GADKYLSSLTTITDVE+S+DLQVVKVYVSVFGDE+GKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEI FIEDESFERGSR                    
Subjt:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF

Query:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                 VIAILDRIKD+K +  DED ++ ELSDA  DDRDW+ DDADEDIIYV
Subjt:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

A0A5A7TVW4 Putative ribosome-binding factor A8.0e-8674.22Show/hide
Query:  MPH-LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL
        MPH LLQQIHPQ +  PLK SSSL SS FPSQF AS PCF SP+SV L+   PVMRGATIRCMANSRRVKMV+KQIQRELS+MLLTDKVLQFAILPEASL
Subjt:  MPH-LLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL

Query:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF
        GADKYLSSLTTITDVE+S+DLQVVKVYVSVFGDE+GKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEI FIEDESFERGSR                    
Subjt:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF

Query:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                 VIAILDRIKD+K +  DED ++ ELSDA  DDRDW+ DDADEDIIYV
Subjt:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

A0A6J1G8H2 probable ribosome-binding factor A, chloroplastic1.6e-11088.63Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

A0A6J1KXB5 probable ribosome-binding factor A, chloroplastic1.7e-10785.88Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
        MPHLLQQIHPQ HHFPLKLSSSLASSRFPSQFL SPPCFCSPNSVALVR+RPVMRGATI+CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLG

Query:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD
        ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR                     
Subjt:  ADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFD

Query:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                VIAILDRIKDEKNNIDDEDME+SELSDAPQDDRDWEED+ADEDIIY+
Subjt:  KAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

SwissProt top hitse value%identityAlignment
B0JRP8 Ribosome-binding factor A1.1e-1841.86Show/hide
Query:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR
        MAN RRV  VS  I+RE+S MLL +            +  D+  + + ++TDV++S DLQ  K++VS++G+E  K   MAGLK+ A +VR  LG+R++LR
Subjt:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR

Query:  LTPEIRFIEDESFERGSRLSREITNYSTN
         TPE+ F+ED S ERG R+   + +  T+
Subjt:  LTPEIRFIEDESFERGSRLSREITNYSTN

O65693 Probable ribosome-binding factor A, chloroplastic7.5e-5756.64Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMR-GATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL
        MP+LL     QSH F L        S       +    F  P S+A V  R  +    T+RCMAN RRVKMV+KQI RELS+MLLTD VLQ A+LPEA+L
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMR-GATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL

Query:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF
        GAD+YLSSLTTI+DVE+S+DLQVVKVYVSVFGD+RGKD+A+AGLKSKAKYVRS LGKRMKLRLTPE+RFIEDE+ ERGSR                    
Subjt:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF

Query:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                 VIAILD+IK EK + +     ++E SD+ +DD+DWE DD DEDIIYV
Subjt:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV

Q3M9Q8 Ribosome-binding factor A2.4e-1843.7Show/hide
Query:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR
        MA +RRV  V++ I+RE+S ML+              +  D+  + + ++TDV++S DLQ  K+YVS++G E  K   MAGLKS   +VRS LG R++LR
Subjt:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR

Query:  LTPEIRFIEDESFERGSRL
         TPE+ FIED S ERG+++
Subjt:  LTPEIRFIEDESFERGSRL

Q55625 Ribosome-binding factor A3.1e-1842.4Show/hide
Query:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR
        MA SRRV  VS  I+RE+S MLL +            +  D+  + + ++T+VE+S DLQ  K++VS++G    K   MAGL S A +VR  LG+RM+LR
Subjt:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR

Query:  LTPEIRFIEDESFERGSRLSREITN
         TPE+ F+ED S ERG ++   + N
Subjt:  LTPEIRFIEDESFERGSRLSREITN

Q8Z0M8 Ribosome-binding factor A2.4e-1843.7Show/hide
Query:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR
        MA +RRV  V++ I+RE+S ML+              +  D+  + + ++TDV++S DLQ  K+YVS++G E  K   MAGLKS   +VRS LG R++LR
Subjt:  MANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLR

Query:  LTPEIRFIEDESFERGSRL
         TPE+ FIED S ERG+++
Subjt:  LTPEIRFIEDESFERGSRL

Arabidopsis top hitse value%identityAlignment
AT4G34730.1 ribosome-binding factor A family protein5.3e-5856.64Show/hide
Query:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMR-GATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL
        MP+LL     QSH F L        S       +    F  P S+A V  R  +    T+RCMAN RRVKMV+KQI RELS+MLLTD VLQ A+LPEA+L
Subjt:  MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMR-GATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASL

Query:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF
        GAD+YLSSLTTI+DVE+S+DLQVVKVYVSVFGD+RGKD+A+AGLKSKAKYVRS LGKRMKLRLTPE+RFIEDE+ ERGSR                    
Subjt:  GADKYLSSLTTITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSF

Query:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV
                 VIAILD+IK EK + +     ++E SD+ +DD+DWE DD DEDIIYV
Subjt:  DKAPVIITKVIAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCATCTGCTGCAGCAAATTCATCCTCAATCCCATCATTTCCCACTCAAACTCTCATCTTCCCTCGCCTCTTCACGATTCCCCTCTCAATTTCTAGCTTCTCCGCC
GTGTTTTTGCTCTCCGAATTCCGTCGCTCTTGTTCGTCGACGTCCGGTAATGAGAGGCGCAACCATACGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGTCCAAGC
AGATTCAGAGGGAGCTTTCCAATATGCTTCTTACCGATAAGGTGTTGCAGTTCGCCATTCTTCCTGAGGCCTCTTTGGGAGCTGATAAGTACCTTTCGTCTCTCACTACC
ATCACCGATGTTGAAATCTCTAGCGACTTGCAGGTGGTTAAAGTATATGTATCCGTCTTTGGTGATGAAAGAGGAAAGGATATTGCTATGGCTGGGTTGAAATCTAAAGC
TAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGGTTAACTCCTGAGATACGTTTTATAGAAGATGAGTCTTTTGAAAGAGGAAGCAGGTTATCGAGGGAGA
TAACAAATTACAGCACAAACACTCATCGAGGCGAGCATAGCTCATTCGATAAAGCACCAGTTATCATTACAAAGGTAATTGCCATATTGGATCGGATCAAAGACGAAAAA
AACAATATCGATGATGAAGACATGGAGCAATCTGAACTATCTGATGCTCCTCAAGACGACCGGGACTGGGAAGAGGATGATGCTGATGAAGACATAATATACGTCGTCAC
TGTTCCAGTTCTTGTTCAACTTACGCTCATCTGTGCTGAGGCATCGGTTTGCCATCGCAGAGCAAGAAGTGAAGGTAAAAATGGTTCAACACCAAGCTCTGCCTCTGATT
CAAAATGA
mRNA sequenceShow/hide mRNA sequence
TAAGAATTGGGCATTACAAGGCCGTACTAATCCAGACGTCCAGACCTCAAGAACGCTCATAGCTTACCAATCCGAATCCATTTCAGCCCAACAAATCAGAGAAATTTGAT
CACAAATATCAAAATTGTTCATCTGGAGAATCGAATTCCAGGATGCCGCATCTGCTGCAGCAAATTCATCCTCAATCCCATCATTTCCCACTCAAACTCTCATCTTCCCT
CGCCTCTTCACGATTCCCCTCTCAATTTCTAGCTTCTCCGCCGTGTTTTTGCTCTCCGAATTCCGTCGCTCTTGTTCGTCGACGTCCGGTAATGAGAGGCGCAACCATAC
GGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGTCCAAGCAGATTCAGAGGGAGCTTTCCAATATGCTTCTTACCGATAAGGTGTTGCAGTTCGCCATTCTTCCTGAG
GCCTCTTTGGGAGCTGATAAGTACCTTTCGTCTCTCACTACCATCACCGATGTTGAAATCTCTAGCGACTTGCAGGTGGTTAAAGTATATGTATCCGTCTTTGGTGATGA
AAGAGGAAAGGATATTGCTATGGCTGGGTTGAAATCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGGTTAACTCCTGAGATACGTTTTATAG
AAGATGAGTCTTTTGAAAGAGGAAGCAGGTTATCGAGGGAGATAACAAATTACAGCACAAACACTCATCGAGGCGAGCATAGCTCATTCGATAAAGCACCAGTTATCATT
ACAAAGGTAATTGCCATATTGGATCGGATCAAAGACGAAAAAAACAATATCGATGATGAAGACATGGAGCAATCTGAACTATCTGATGCTCCTCAAGACGACCGGGACTG
GGAAGAGGATGATGCTGATGAAGACATAATATACGTCGTCACTGTTCCAGTTCTTGTTCAACTTACGCTCATCTGTGCTGAGGCATCGGTTTGCCATCGCAGAGCAAGAA
GTGAAGGTAAAAATGGTTCAACACCAAGCTCTGCCTCTGATTCAAAATGATGTTGCTCATGATTCTCATTATGCAACCCATAATCTATTATCACCATATATAATAGATAG
AAATTTCCTATTCTATCTTCTGATTCAACTGTTCGTAGTTGCATGGGGACGATAATATTGAT
Protein sequenceShow/hide protein sequence
MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIRCMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTT
ITDVEISSDLQVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRLSREITNYSTNTHRGEHSSFDKAPVIITKVIAILDRIKDEK
NNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYVVTVPVLVQLTLICAEASVCHRRARSEGKNGSTPSSASDSK