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Carg27245 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27245
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTumor necrosis factor alpha-induced protein like
Genome locationCarg_Chr19:1359331..1361123
RNA-Seq ExpressionCarg27245
SyntenyCarg27245
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011352.1 hypothetical protein SDJN02_26257, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-96100Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

XP_022963849.1 uncharacterized protein LOC111464038 isoform X1 [Cucurbita moschata]9.0e-9699.49Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDS KSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

XP_022963851.1 uncharacterized protein LOC111464038 isoform X2 [Cucurbita moschata]4.9e-9498.98Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDS KSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASR ACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

XP_022967652.1 uncharacterized protein LOC111467096 [Cucurbita maxima]9.3e-9397.97Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTP PATDS KSAIFNRKINSNGNKFSSPENTNIVKNR PAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASR ACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

XP_038887829.1 uncharacterized protein LOC120077835 isoform X1 [Benincasa hispida]2.8e-8187.31Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PATDS KSAIFNRK NSNG KFSSPENTNI KNRVPA LFK PSRN SSLSTISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQI+KD +SS S L+KRFKIQSQACQKMMDEAEKEYKKMSQRIYESQE MKAS+EEFL HE ESASRAACK S+TELSQSFERSIDALRSRFGI ST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

TrEMBL top hitse value%identityAlignment
A0A0A0LCH5 Uncharacterized protein1.7e-7986.29Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PATDS KSAIFNRK+NS G K SSPENTN+ KN+VPAGLFKS  RNASSLS+ISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQI+KD +SS SRL+KRFKIQ Q CQKMMDEAEKEYKKMSQRI+ESQEAMKASYEEFLAHE ESASR ACKTS+TELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

A0A1S3CDQ6 uncharacterized protein LOC103499240 isoform X11.3e-7986.29Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PATDS KSAIFNRK NS G KFSSPENTNI KN+VPAGLFKS  RNASSLS+ISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQI+KD +SS SRL+KRFKIQSQ CQKMMDEAEKEYKKM+QRI+ESQEAMKASYEEFLAHE ESASRAACKT +TELSQ FERSIDALRSRFGI ST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

A0A6J1HH77 uncharacterized protein LOC111464038 isoform X22.4e-9498.98Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDS KSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASR ACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

A0A6J1HLD9 uncharacterized protein LOC111464038 isoform X14.4e-9699.49Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTPLPATDS KSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

A0A6J1HRE1 uncharacterized protein LOC1114670964.5e-9397.97Show/hide
Query:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
        MGKKRSRTRRSSAAELLETPPSTP PATDS KSAIFNRKINSNGNKFSSPENTNIVKNR PAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH
Subjt:  MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSH

Query:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST
        SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASR ACKTSMTELSQSFERSIDALRSRFGIPST
Subjt:  SQIIKDHESSTSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGAGGAGTCGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCACCGTCGACGCCACTTCCGGCCACCGATTCTTCAAAGTCAGCGATCTTCAA
CAGAAAAATTAACAGCAATGGAAACAAGTTTTCTTCACCAGAGAACACCAACATTGTGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCGCCTTCTCGAAATGCTTCGA
GTCTGAGCACTATATCTGATCTCAAGGATTTTGCGGCTTCACAACTCCTCGATCTCAAGCGCCACATTGATCATTCTCACTCGCAAATAATCAAAGATCATGAATCCTCA
ACCTCCCGCCTCGAAAAGCGATTTAAGATTCAAAGCCAAGCATGCCAGAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTTATGAAAGTCA
GGAAGCAATGAAGGCATCTTATGAAGAGTTCTTGGCACATGAACACGAGAGTGCTTCTCGAGCAGCTTGCAAAACATCCATGACCGAGCTTTCGCAGTCCTTTGAGAGAT
CAATTGATGCTCTTCGTAGCCGTTTTGGGATCCCCTCCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGAGGAGTCGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCACCGTCGACGCCACTTCCGGCCACCGATTCTTCAAAGTCAGCGATCTTCAA
CAGAAAAATTAACAGCAATGGAAACAAGTTTTCTTCACCAGAGAACACCAACATTGTGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCGCCTTCTCGAAATGCTTCGA
GTCTGAGCACTATATCTGATCTCAAGGATTTTGCGGCTTCACAACTCCTCGATCTCAAGCGCCACATTGATCATTCTCACTCGCAAATAATCAAAGATCATGAATCCTCA
ACCTCCCGCCTCGAAAAGCGATTTAAGATTCAAAGCCAAGCATGCCAGAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTTATGAAAGTCA
GGAAGCAATGAAGGCATCTTATGAAGAGTTCTTGGCACATGAACACGAGAGTGCTTCTCGAGCAGCTTGCAAAACATCCATGACCGAGCTTTCGCAGTCCTTTGAGAGAT
CAATTGATGCTCTTCGTAGCCGTTTTGGGATCCCCTCCACCTAA
Protein sequenceShow/hide protein sequence
MGKKRSRTRRSSAAELLETPPSTPLPATDSSKSAIFNRKINSNGNKFSSPENTNIVKNRVPAGLFKSPSRNASSLSTISDLKDFAASQLLDLKRHIDHSHSQIIKDHESS
TSRLEKRFKIQSQACQKMMDEAEKEYKKMSQRIYESQEAMKASYEEFLAHEHESASRAACKTSMTELSQSFERSIDALRSRFGIPST