; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEndonuclease III homolog
Genome locationCarg_Chr14:11072668..11076040
RNA-Seq ExpressionCarg27246
SyntenyCarg27246
Gene Ontology termsGO:0006285 - base-excision repair, AP site formation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000703 - oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity (molecular function)
InterPro domainsIPR000445 - Helix-hairpin-helix motif
IPR003265 - HhH-GPD domain
IPR003651 - Endonuclease III-like, iron-sulphur cluster loop motif
IPR004035 - Endonuclease III, iron-sulphur binding site
IPR004036 - Endonuclease III-like, conserved site-2
IPR011257 - DNA glycosylase
IPR023170 - Helix-hairpin-helix, base-excision DNA repair, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582045.1 Endonuclease III-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-93100Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

KAG7018476.1 Endonuclease III-like 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.6e-93100Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

XP_022955790.1 endonuclease III homolog 1, chloroplastic-like isoform X1 [Cucurbita moschata]1.0e-9299.41Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDV+GICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

XP_023527414.1 endonuclease III homolog 1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-93100Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

XP_023527415.1 endonuclease III homolog 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]3.6e-93100Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

TrEMBL top hitse value%identityAlignment
A0A5A7TN21 Endonuclease III homolog6.8e-9096.45Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTS+
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRV LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS LCPSAFKE+SSPSPKLK SSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

A0A6J1GUU3 Endonuclease III homolog5.1e-9399.41Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDV+GICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

A0A6J1GW15 Endonuclease III homolog5.1e-9399.41Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDV+GICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

A0A6J1IRV0 Endonuclease III homolog2.5e-9298.82Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAF E SSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

A0A6J1IUE8 Endonuclease III homolog2.5e-9298.82Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAF E SSPSPKLKRSSSTK
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

SwissProt top hitse value%identityAlignment
A7M7B9 Endonuclease III-like protein 11.2e-4356.46Show/hide
Query:  DESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEET
        D++T+  +IYPVGF+  K K +K+   I   KYGGDIP ++EEL+ LPG+GPK+AHL M +AWN V GI VDTHVHRI NRL WV     K++T  PEET
Subjt:  DESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEET

Query:  RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA
        RVALE WLP++ W  IN LLVGFGQ  C P+ P+C  C    +CP+A
Subjt:  RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA

B9DFZ0 Endonuclease III homolog 2, chloroplastic2.7e-7578.11Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        +DKADESTIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVAL+ WLPK EWV IN LLVGFGQTICTPLRP CG CS++ +CPSAFKET S S KLK+S  +K
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

P78549 Endonuclease III-like protein 12.7e-4355.7Show/hide
Query:  KADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPE
        + D++T+  LIYPVGF+ +K K +K+ + I    YGGDIP S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NRL W     +K+ T SPE
Subjt:  KADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPE

Query:  ETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA
        ETR ALE WLP+E W  IN LLVGFGQ  C P+ P+C  C    LCP+A
Subjt:  ETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA

Q2KID2 Endonuclease III-like protein 11.2e-4356.38Show/hide
Query:  KADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPE
        + D+ST+ +LIYPVGF+ +K K +K+ + I   +Y GDIP S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NRL W     +K+ T SPE
Subjt:  KADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPE

Query:  ETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA
        ETR ALE WLP+E W  IN LLVGFGQ  C P+RP+C  C    LCP+A
Subjt:  ETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSA

Q9SIC4 Endonuclease III homolog 1, chloroplastic4.6e-7578.11Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        +DKADESTIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT+S
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVAL+ WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKETSSPS KLK+S+ +K
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

Arabidopsis top hitse value%identityAlignment
AT1G05900.1 endonuclease III 26.2e-4380.21Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQ
        +DKADESTIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQ
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQ

AT1G05900.2 endonuclease III 21.9e-7678.11Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        +DKADESTIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKTSS
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVAL+ WLPK EWV IN LLVGFGQTICTPLRP CG CS++ +CPSAFKET S S KLK+S  +K
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

AT2G31450.1 DNA glycosylase superfamily protein3.3e-7678.11Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        +DKADESTIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT+S
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVAL+ WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKETSSPS KLK+S+ +K
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

AT2G31450.2 DNA glycosylase superfamily protein3.3e-7678.11Show/hide
Query:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS
        +DKADESTIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT+S
Subjt:  MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSS

Query:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK
        PEETRVAL+ WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKETSSPS KLK+S+ +K
Subjt:  PEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK

AT4G12740.1 HhH-GPD base excision DNA repair family protein4.6e-0629.23Show/hide
Query:  YSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEETRVALELWLPKEEWV
        Y  +A+ L + AK+ +    G  P     L+ + GIG   A  I  +A+N+   + VD +V R+  RL  +S    K + ++    ++A +L  P     
Subjt:  YSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEETRVALELWLPKEEWV

Query:  PINPLLVGFGQTICTPLRPKCGNCSVSHLC
          N  L+  G T+CT  +P C +C VS  C
Subjt:  PINPLLVGFGQTICTPLRPKCGNCSVSHLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGCTGATGAATCAACCATTAAAAGCTTGATTTACCCTGTTGGATTTTATTCTACAAAGGCTAAAAATTTGAAGAAGATTGCCAAAATATGTCTTATGAAGTA
TGGTGGGGACATACCTAGATCATTGGAGGAGCTACTTCTACTGCCTGGGATAGGCCCTAAGATTGCACATTTGATCATGATTATGGCGTGGAACGATGTTCAGGGGATAT
GTGTCGATACTCACGTTCATCGCATTTGCAATCGGCTTGGATGGGTGTCTGGGAAAGGCTCGAAACAGAAAACTTCCTCCCCTGAAGAAACTCGAGTGGCATTAGAACTA
TGGCTGCCAAAGGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGATTTGGACAGACTATTTGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGCCACTT
GTGTCCATCTGCATTCAAGGAGACTTCAAGCCCATCTCCCAAATTAAAGCGTTCAAGTTCCACCAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTAAGGTTCTTCAGTAACACACTACACGTTCTATTGTATTTTCCCTCAATGGCCTTGCAGGCACTAGATACTGATGACACAAAACCCACTGTTCTTTATATTTTGTATTT
GATATCCGATTATATGAACCAATAACTACAAATTTTACTTCATTTTTAATAGGAAAGAAGATTTGCTGTCTTGGCATCTTCTCTTCTCTCAAGCCAAACCAAAGACCACG
TAACTCATGGAGCAGCATTGCGTCTCCAAGAAAGTGGTCTTCTTACAGCTGATGCCATGGACAAAGCTGATGAATCAACCATTAAAAGCTTGATTTACCCTGTTGGATTT
TATTCTACAAAGGCTAAAAATTTGAAGAAGATTGCCAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAGCTACTTCTACTGCCTGGGATAGG
CCCTAAGATTGCACATTTGATCATGATTATGGCGTGGAACGATGTTCAGGGGATATGTGTCGATACTCACGTTCATCGCATTTGCAATCGGCTTGGATGGGTGTCTGGGA
AAGGCTCGAAACAGAAAACTTCCTCCCCTGAAGAAACTCGAGTGGCATTAGAACTATGGCTGCCAAAGGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGATTTGGA
CAGACTATTTGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGCCACTTGTGTCCATCTGCATTCAAGGAGACTTCAAGCCCATCTCCCAAATTAAAGCGTTC
AAGTTCCACCAAGTAGCTTTGATCATCTTTTTGTATGAATTGGAAGACTTAGCAGCCGCACATTTCCTTTGTGGGGGATCTCATTGGCCATTTTTGTGTAGAACTAACCT
TGTTATTGGTATATCAATGTTCTTGGAACATATATTTTGACAAAACTTTCACTACACTGTTTGGCAATTCATTAGGAAAAATTAACTAAATGTCATTGGTTTTAATTTTA
TGACAAAACTCTTAACATCCAAGATATCATACC
Protein sequenceShow/hide protein sequence
MDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEETRVALEL
WLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKRSSSTK