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Carg27252 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27252
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:11038402..11039892
RNA-Seq ExpressionCarg27252
SyntenyCarg27252
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582041.1 Isoleucine--tRNA ligase, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1967.02Show/hide
Query:  HPPTEDLHSRRPHLLGRRVQFAGVSSACLCDCDTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRS
        HP T  + ++R     RR +    S+           HFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKR+
Subjt:  HPPTEDLHSRRPHLLGRRVQFAGVSSACLCDCDTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRS
KAG7018470.1 hypothetical protein SDJN02_20338, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-91100Show/hide
Query:  MWDLTIHPPLGSTSSLALIPFFNRCGTPQSTPFRAEHPCWLTASYLPLLELSLLASTSLALTNIWKLELLLKALPVKAHPPTEDLHSRRPHLLGRRVQFA
        MWDLTIHPPLGSTSSLALIPFFNRCGTPQSTPFRAEHPCWLTASYLPLLELSLLASTSLALTNIWKLELLLKALPVKAHPPTEDLHSRRPHLLGRRVQFA
Subjt:  MWDLTIHPPLGSTSSLALIPFFNRCGTPQSTPFRAEHPCWLTASYLPLLELSLLASTSLALTNIWKLELLLKALPVKAHPPTEDLHSRRPHLLGRRVQFA

Query:  GVSSACLCDCDTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRSY
        GVSSACLCDCDTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRSY
Subjt:  GVSSACLCDCDTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRSY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATCTCACAATCCACCCGCCTTTGGGCTCAACATCCTCGCTGGCACTCATTCCCTTCTTCAATCGATGTGGGACCCCCCAATCTACCCCCTTCAGGGCCGAGCA
TCCTTGTTGGCTTACCGCCTCGTATCTACCCCTTTTGGAGCTTAGCCTCCTTGCTAGCACATCACTCGCCTTGACAAATATTTGGAAGCTCGAGCTTCTCTTGAAGGCCC
TTCCCGTGAAAGCTCACCCACCCACCGAAGATCTGCATTCTAGGAGACCTCACCTCCTGGGTCGACGTGTGCAGTTTGCTGGGGTGTCTTCGGCCTGCTTGTGCGATTGT
GACACTAGGCACTTCCATTTTCGTAGCTCTACCGCATCCCTCCCATTACCTCACGCTCGCGCCACGCCGCCGCTATTCCTGCCCGACGCCGTCTCAGCAGCTGCTGCTGC
TGCACTCTCATCTGCCCCAGTTCTGCCTTGCGACAAAATCGCCGCCGTCCCCTCCCTCTCTTCCAGCAAGCGGAGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATCTCACAATCCACCCGCCTTTGGGCTCAACATCCTCGCTGGCACTCATTCCCTTCTTCAATCGATGTGGGACCCCCCAATCTACCCCCTTCAGGGCCGAGCA
TCCTTGTTGGCTTACCGCCTCGTATCTACCCCTTTTGGAGCTTAGCCTCCTTGCTAGCACATCACTCGCCTTGACAAATATTTGGAAGCTCGAGCTTCTCTTGAAGGCCC
TTCCCGTGAAAGCTCACCCACCCACCGAAGATCTGCATTCTAGGAGACCTCACCTCCTGGGTCGACGTGTGCAGTTTGCTGGGGTGTCTTCGGCCTGCTTGTGCGATTGT
GACACTAGGCACTTCCATTTTCGTAGCTCTACCGCATCCCTCCCATTACCTCACGCTCGCGCCACGCCGCCGCTATTCCTGCCCGACGCCGTCTCAGCAGCTGCTGCTGC
TGCACTCTCATCTGCCCCAGTTCTGCCTTGCGACAAAATCGCCGCCGTCCCCTCCCTCTCTTCCAGCAAGCGGAGTTACTAA
Protein sequenceShow/hide protein sequence
MWDLTIHPPLGSTSSLALIPFFNRCGTPQSTPFRAEHPCWLTASYLPLLELSLLASTSLALTNIWKLELLLKALPVKAHPPTEDLHSRRPHLLGRRVQFAGVSSACLCDC
DTRHFHFRSSTASLPLPHARATPPLFLPDAVSAAAAAALSSAPVLPCDKIAAVPSLSSSKRSY