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Carg27268 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27268
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionleucine-rich repeat extensin-like protein 1
Genome locationCarg_Chr04:16392879..16393301
RNA-Seq ExpressionCarg27268
SyntenyCarg27268
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601836.1 hypothetical protein SDJN03_07069, partial [Cucurbita argyrosperma subsp. sororia]1.7e-7299.29Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPT TGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

KAG7032542.1 hypothetical protein SDJN02_06591, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-73100Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

XP_022961992.1 leucine-rich repeat extensin-like protein 1 [Cucurbita moschata]2.1e-7097.14Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPT T YP TPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

XP_022989991.1 extensin-2-like [Cucurbita maxima]9.6e-6894.29Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLS ILL LIVSVLPPAT SDDTCPYPCYPPPT TGYPATPAT TPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGA VFICVSV LN M
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

XP_023520931.1 extensin-1-like [Cucurbita pepo subsp. pepo]3.2e-7197.86Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILL LI+SVLPPATSSDDTCPYPCYPPPT TGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

TrEMBL top hitse value%identityAlignment
A0A0A0KUZ1 Uncharacterized protein4.7e-4469.63Show/hide
Query:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LL L++++ PPAT SDDTCPYPCYPPPT +G   TPATL+PPSQT   SYSPPAYYSPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNL
        PPHKP+DESGG+AV    SE+G      V + L+L
Subjt:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNL

A0A1S3CU56 proline-rich receptor-like protein kinase PERK83.6e-4471.11Show/hide
Query:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LL L++++LPPAT SDDTCPYPCYPPPT  G   TPAT +PPSQ    SYSPPAYYSPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEI----GAFVFICVSV
        PPHKP+DESGG+AV    SE+    G FVFI +S+
Subjt:  PPHKPEDESGGTAV----SEI----GAFVFICVSV

A0A5D3E4I6 Proline-rich receptor-like protein kinase PERK83.6e-4471.11Show/hide
Query:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LL L++++LPPAT SDDTCPYPCYPPPT  G   TPAT +PPSQ    SYSPPAYYSPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEI----GAFVFICVSV
        PPHKP+DESGG+AV    SE+    G FVFI +S+
Subjt:  PPHKPEDESGGTAV----SEI----GAFVFICVSV

A0A6J1HBK1 leucine-rich repeat extensin-like protein 11.0e-7097.14Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPT T YP TPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

A0A6J1JLQ1 extensin-2-like4.7e-6894.29Show/hide
Query:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLS ILL LIVSVLPPAT SDDTCPYPCYPPPT TGYPATPAT TPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM
        YFPYYYKKPPHKPEDESGGTAVSEIGA VFICVSV LN M
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23050.1 hydroxyproline-rich glycoprotein family protein1.1e-1338.81Show/hide
Query:  TILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSG-SYSPPA----YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPY
        T++    +   P    SD  CPYPCYP P   G  +TP+   PP     G +Y  PA     Y PP    P Y  PPY G    G +   PPPP+ ILPY
Subjt:  TILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSG-SYSPPA----YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPY

Query:  FPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSV
        FPYY++KPPH+ +  S  + V+  G +    V+V
Subjt:  FPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSV

AT1G70985.1 hydroxyproline-rich glycoprotein family protein3.0e-1138.33Show/hide
Query:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYP---------YNPPPYDGDSFDG--ITPPPPDP
        L ++L    + + P  T S   CPYPC P P                   +GS  P  YY  P  YYP         Y  PPY G +  G    PPPPDP
Subjt:  LSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYP---------YNPPPYDGDSFDG--ITPPPPDP

Query:  ILPYFPYYYKKPPHKPEDES
        ILPYFP+YY+KPPH+ +  S
Subjt:  ILPYFPYYYKKPPHKPEDES

AT3G06750.1 hydroxyproline-rich glycoprotein family protein9.1e-0839.5Show/hide
Query:  LLPLIVSVLPPATSSDDT--------CPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPP---AAYYPYNPPPYDGDSFDGI----------T
        LL L++S+    TS D+T        C  PC P P+    P  P    P S    GSY    YYSPP   ++     PPPY GD + G           T
Subjt:  LLPLIVSVLPPATSSDDT--------CPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPP---AAYYPYNPPPYDGDSFDGI----------T

Query:  PPPPDPILPYFPYYYKKPP
        PPPP+PI+PYFP+YY  PP
Subjt:  PPPPDPILPYFPYYYKKPP

AT4G16140.1 proline-rich family protein1.1e-0537.29Show/hide
Query:  STILLPLIVSVLPPATSSDDTC-PYPCYPPPTDTGYPATPA---TLTPPSQTDSGSYSPPAYYSPPA----AYYP---------YNPPPYDGDSFDGITP
        +T+  P  ++     TS D+ C P P  PPP     P  P+   T  PP  + SG    P YY PPA    +Y P         Y PPP  G ++     
Subjt:  STILLPLIVSVLPPATSSDDTC-PYPCYPPPTDTGYPATPA---TLTPPSQTDSGSYSPPAYYSPPA----AYYP---------YNPPPYDGDSFDGITP

Query:  PPPDPILPYFPYYYKKPP
        PPP+PI+PYFP+YY  PP
Subjt:  PPPDPILPYFPYYYKKPP

AT5G49280.1 hydroxyproline-rich glycoprotein family protein1.8e-1136.54Show/hide
Query:  LSTILLPLIVSVLPPATSSDD--------TCPYPC-----YPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPP------AAYYP----------YNP
        LST+++ L+VSV P  TS D+        +C  PC      PPP     P+TP T  PP  +   S    +YY PP       + YP          Y P
Subjt:  LSTILLPLIVSVLPPATSSDD--------TCPYPC-----YPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPP------AAYYP----------YNP

Query:  PPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV
        PPY G+     TPPPP+PI+PYFP+YY  PP     +   ++ S I A   VF+C+
Subjt:  PPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGCCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCC
TCCGCCAACCGACACCGGCTATCCCGCCACTCCTGCCACCCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCCCCGCCGGCTGCAT
ATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTGCCGTACTTCCCTTACTATTACAAGAAGCCTCCT
CACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGCCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCC
TCCGCCAACCGACACCGGCTATCCCGCCACTCCTGCCACCCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCCCCGCCGGCTGCAT
ATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTGCCGTACTTCCCTTACTATTACAAGAAGCCTCCT
CACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATGTAA
Protein sequenceShow/hide protein sequence
MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPP
HKPEDESGGTAVSEIGAFVFICVSVLLNLM