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Carg27292 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27292
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:6667557..6668024
RNA-Seq ExpressionCarg27292
SyntenyCarg27292
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055857.1 putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa]5.2e-3856.74Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP
        M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP

Query:  NPKIESLNKCPSPSTIFFIGDGDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
        N K+ESL KCPS S+IF+IG+GDS        E+ EEE  GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  NPKIESLNKCPSPSTIFFIGDGDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

KAG6577458.1 hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sororia]3.1e-7599.35Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI
        MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPS STI
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI

Query:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
        FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
Subjt:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

KAG7015529.1 hypothetical protein SDJN02_23165, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-76100Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI
        MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI

Query:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVHV
        FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVHV
Subjt:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVHV

KGN56109.1 hypothetical protein Csa_011766 [Cucumis sativus]3.3e-3756.11Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP
        M++ K+SE+V++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP

Query:  NPKIESLNKCPSPSTIFFIGDGDSEE----------AEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
        N K+ESL KCPS S+IF+IG+GDSE            EE   GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  NPKIESLNKCPSPSTIFFIGDGDSEE----------AEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

XP_022932284.1 uncharacterized protein LOC111438634 [Cucurbita moschata]3.2e-7297.37Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI
        MSRLKRSE+VLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPS STI
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI

Query:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN
        FFIGD DSEEAEEEASGG AGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN
Subjt:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN

TrEMBL top hitse value%identityAlignment
A0A0A0L509 Uncharacterized protein1.6e-3756.11Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP
        M++ K+SE+V++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP

Query:  NPKIESLNKCPSPSTIFFIGDGDSEE----------AEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
        N K+ESL KCPS S+IF+IG+GDSE            EE   GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  NPKIESLNKCPSPSTIFFIGDGDSEE----------AEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

A0A5D3DK86 Putative LIM and calponin domains-containing protein 12.5e-3856.74Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP
        M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPNNAHSPN--TTPSPHTSANN--------HRALEKAHSDNIPPP

Query:  NPKIESLNKCPSPSTIFFIGDGDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
        N K+ESL KCPS S+IF+IG+GDS        E+ EEE  GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  NPKIESLNKCPSPSTIFFIGDGDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

A0A6J1EWK2 uncharacterized protein LOC1114386341.6e-7297.37Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI
        MSRLKRSE+VLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPS STI
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTI

Query:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN
        FFIGD DSEEAEEEASGG AGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN
Subjt:  FFIGDGDSEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKN

B9I151 Uncharacterized protein5.4e-2541.84Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAF--------------------------PNNAHSPNTTPSPHTSAN
        MS+LKRS+++++  L  LL +TPL+SSSLRP YLYF+ NLLI+      GL+S+AF                          P + +  +TT   + +  
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAF--------------------------PNNAHSPNTTPSPHTSAN

Query:  NHRALEKAHSDNIPPPNPKIE-SLNKCPSPSTIFFIGDGD---------SEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
          + LEK+ S+NI     K++  + KCPS  ++FFIG GD         +EE EEEA G   G +GQ+LF +AETFIGNFYKQL+MQ++ESWK +H
Subjt:  NHRALEKAHSDNIPPPNPKIE-SLNKCPSPSTIFFIGDGD---------SEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

U7E225 Uncharacterized protein5.4e-2541.84Show/hide
Query:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAF--------------------------PNNAHSPNTTPSPHTSAN
        MS+LKRS+++++  L  LL +TPL+SSSLRP YLYF+ NLLI+      GL+S+AF                          P + +  +TT   + +  
Subjt:  MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAF--------------------------PNNAHSPNTTPSPHTSAN

Query:  NHRALEKAHSDNIPPPNPKIE-SLNKCPSPSTIFFIGDGD---------SEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH
          + LEK+ S+NI     K++  + KCPS  ++FFIG GD         +EE EEEA G   G +GQ+LF +AETFIGNFYKQL+MQ++ESWK +H
Subjt:  NHRALEKAHSDNIPPPNPKIE-SLNKCPSPSTIFFIGDGD---------SEEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGGTTGAAGAGATCCGAAGTTGTTCTTGTTTTGTGCCTCACCCTTCTTCTTCTAATAACGCCTCTTCTTTCCTCATCCCTTAGACCCACATATCTCTACTTCGT
CTTCAACCTCCTCATCCTTGGCCTTCTCTCCTCTGCCTTCCCAAATAATGCTCACAGCCCCAACACCACCCCTTCCCCTCACACCTCCGCCAACAACCACAGGGCTCTAG
AGAAGGCCCATTCCGACAACATTCCCCCTCCCAATCCCAAAATCGAATCTCTCAACAAGTGTCCCTCTCCTTCCACCATTTTCTTCATCGGAGATGGCGACAGTGAGGAG
GCGGAAGAGGAGGCTTCTGGCGGCGCCGCCGGTGGAAATGGGCAAGACTTGTTTGCCCAAGCTGAGACGTTTATTGGGAACTTCTATAAGCAGTTGGAGATGCAGAAACA
GGAGTCTTGGAAGAATGTTCATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGGTTGAAGAGATCCGAAGTTGTTCTTGTTTTGTGCCTCACCCTTCTTCTTCTAATAACGCCTCTTCTTTCCTCATCCCTTAGACCCACATATCTCTACTTCGT
CTTCAACCTCCTCATCCTTGGCCTTCTCTCCTCTGCCTTCCCAAATAATGCTCACAGCCCCAACACCACCCCTTCCCCTCACACCTCCGCCAACAACCACAGGGCTCTAG
AGAAGGCCCATTCCGACAACATTCCCCCTCCCAATCCCAAAATCGAATCTCTCAACAAGTGTCCCTCTCCTTCCACCATTTTCTTCATCGGAGATGGCGACAGTGAGGAG
GCGGAAGAGGAGGCTTCTGGCGGCGCCGCCGGTGGAAATGGGCAAGACTTGTTTGCCCAAGCTGAGACGTTTATTGGGAACTTCTATAAGCAGTTGGAGATGCAGAAACA
GGAGTCTTGGAAGAATGTTCATGTTTGA
Protein sequenceShow/hide protein sequence
MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLILGLLSSAFPNNAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTIFFIGDGDSEE
AEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVHV