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Carg27308 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27308
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMFP1 attachment factor 1-like
Genome locationCarg_Chr12:3517148..3519798
RNA-Seq ExpressionCarg27308
SyntenyCarg27308
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0048527 - lateral root development (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR025265 - WPP domain
IPR038214 - WPP domain superfamily
IPR044692 - WPP domain-containing protein 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020597.1 MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-110100Show/hide
Query:  MRFFKLPFMAVALLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAF
        MRFFKLPFMAVALLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAF
Subjt:  MRFFKLPFMAVALLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAF

Query:  VALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEEKFQRGQYLLAVDCYGCASEDAGPEGEWMVRFHIDSREERVSQRWVDCEIPHRLERKTNIL
        VALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEEKFQRGQYLLAVDCYGCASEDAGPEGEWMVRFHIDSREERVSQRWVDCEIPHRLERKTNIL
Subjt:  VALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEEKFQRGQYLLAVDCYGCASEDAGPEGEWMVRFHIDSREERVSQRWVDCEIPHRLERKTNIL

Query:  YEGVKTSS
        YEGVKTSS
Subjt:  YEGVKTSS

XP_008444590.1 PREDICTED: MFP1 attachment factor 1 [Cucumis melo]7.0e-1471.43Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKR+G IP DEAA VA  IEEEAYA  NG P ++DDG++ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

XP_022951889.1 MFP1 attachment factor 1-like [Cucurbita moschata]1.5e-4883.33Show/hide
Query:  MAVA-LLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSS----------------KRKRTRDAVISRLIETLSSPSMFSKRYG
        MAVA LLLLLLLSGDINGEA  NTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMS                   +RTRDAVISRLIETLSSPSMFSKRYG
Subjt:  MAVA-LLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSS----------------KRKRTRDAVISRLIETLSSPSMFSKRYG

Query:  TIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRS
        TIPADEAAFVALSIEEEAYAITNG PATMDDGIDILQASTLSRS
Subjt:  TIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRS

XP_031736767.1 MFP1 attachment factor 1 [Cucumis sativus]6.3e-1574.6Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKR+GTIP DEAA VA  IEEEAYA  NG P ++DDGI+ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

XP_038885619.1 MFP1 attachment factor 1-like [Benincasa hispida]7.0e-1449.07Show/hide
Query:  INGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM
        ++ + N+    ++ P    KD  +  K      PF    S     +RTRDAVISRLIETLS+PS+ SKR+GT+P +EAA VA  IE+EAYA  NG P T+
Subjt:  INGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM

Query:  DDGIDILQ
        DDGI+ILQ
Subjt:  DDGIDILQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNB9 MFP1 attachment factor 13.1e-1574.6Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKR+GTIP DEAA VA  IEEEAYA  NG P ++DDGI+ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

A0A1S3BBH7 MFP1 attachment factor 13.4e-1471.43Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKR+G IP DEAA VA  IEEEAYA  NG P ++DDG++ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

A0A5A7V571 MFP1 attachment factor 13.4e-1471.43Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKR+G IP DEAA VA  IEEEAYA  NG P ++DDG++ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

A0A6J1BSC5 MFP1 attachment factor 1-like1.3e-1373.02Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVISRLIETLS+PS+ SKRYGTIP DEAA  A  IEEEAY      PAT DDGI+ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

A0A6J1GK27 MFP1 attachment factor 1-like7.2e-4983.33Show/hide
Query:  MAVA-LLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSS----------------KRKRTRDAVISRLIETLSSPSMFSKRYG
        MAVA LLLLLLLSGDINGEA  NTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMS                   +RTRDAVISRLIETLSSPSMFSKRYG
Subjt:  MAVA-LLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSS----------------KRKRTRDAVISRLIETLSSPSMFSKRYG

Query:  TIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRS
        TIPADEAAFVALSIEEEAYAITNG PATMDDGIDILQASTLSRS
Subjt:  TIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRS

SwissProt top hitse value%identityAlignment
Q0WQ91 WPP domain-containing protein 33.3e-0641.33Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEE
        +++RD V++ +I+TLS+ S+ S +YGTI  +EA+ VA SIEE+AY I + F ++  DGI  L+   +  S  + E
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEE

Q9C500 WPP domain-containing protein 25.7e-1132.26Show/hide
Query:  EANTNTNTVKLPSQ---ATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM
        E++T  + +  P+    A+KD +   + +   +P  + +      ++TRDAV++RLIETLS+ S+ SKRYGT+ +D+A  VA  IEEEAY + +   ++ 
Subjt:  EANTNTNTVKLPSQ---ATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM

Query:  DDGIDILQASTLSRSGSLEEKFQRGQYLLA---------VDCYGCASEDAGPEGE
        DDGI IL+  +   S  + E  +                 D    + +DAGP  E
Subjt:  DDGIDILQASTLSRSGSLEEKFQRGQYLLA---------VDCYGCASEDAGPEGE

Q9FMH6 WPP domain-containing protein 19.8e-1143.88Show/hide
Query:  NTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQA
        N+  LP+  T+     +    R+ P         ++TRDAVI+RLIETLS+ S+ SKR+G++ ++EA+ VA SIE+EAYAI +      DDGI+IL+A
Subjt:  NTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQA

Q9M7N6 MFP1 attachment factor 12.8e-1361.9Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ
        +RTRDAVI+RLIE+LS+PS+ SKRYGT+P DEA+  A  IEEEA+A      +  DDGI+ILQ
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQ

Arabidopsis top hitse value%identityAlignment
AT1G47200.1 WPP domain protein 24.1e-1232.26Show/hide
Query:  EANTNTNTVKLPSQ---ATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM
        E++T  + +  P+    A+KD +   + +   +P  + +      ++TRDAV++RLIETLS+ S+ SKRYGT+ +D+A  VA  IEEEAY + +   ++ 
Subjt:  EANTNTNTVKLPSQ---ATKDGNRQMKEQRRMRPFHVFMS--SKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATM

Query:  DDGIDILQASTLSRSGSLEEKFQRGQYLLA---------VDCYGCASEDAGPEGE
        DDGI IL+  +   S  + E  +                 D    + +DAGP  E
Subjt:  DDGIDILQASTLSRSGSLEEKFQRGQYLLA---------VDCYGCASEDAGPEGE

AT5G27940.1 WPP domain protein 32.3e-0741.33Show/hide
Query:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEE
        +++RD V++ +I+TLS+ S+ S +YGTI  +EA+ VA SIEE+AY I + F ++  DGI  L+   +  S  + E
Subjt:  KRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQASTLSRSGSLEE

AT5G43070.1 WPP domain protein 17.0e-1243.88Show/hide
Query:  NTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQA
        N+  LP+  T+     +    R+ P         ++TRDAVI+RLIETLS+ S+ SKR+G++ ++EA+ VA SIE+EAYAI +      DDGI+IL+A
Subjt:  NTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAYAITNGFPATMDDGIDILQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTCTTCAAGCTGCCGTTCATGGCGGTGGCCTTGCTGCTGCTGCTCCTCCTCTCAGGCGACATTAATGGAGAAGCCAATACCAATACCAATACCGTGAAGCTACC
AAGCCAAGCAACCAAAGACGGCAACAGACAAATGAAAGAGCAACGTAGGATGAGGCCATTCCATGTGTTCATGTCCAGTAAGAGGAAGCGCACTCGCGACGCCGTTATCA
GCCGTCTGATCGAAACCCTTTCCTCCCCTTCAATGTTCTCTAAGCGATACGGCACTATTCCAGCGGACGAAGCTGCTTTTGTCGCGCTAAGCATCGAGGAGGAGGCGTAT
GCCATTACCAATGGCTTCCCTGCCACCATGGACGACGGCATCGACATTCTCCAGGCCTCTACTCTAAGCAGATCAGGAAGCTTGGAAGAGAAATTTCAGAGAGGACAATA
TCTACTAGCGGTGGACTGTTATGGGTGTGCCAGCGAGGATGCTGGCCCCGAAGGGGAGTGGATGGTGAGATTTCATATCGATTCGAGAGAGGAACGAGTCTCCCAAAGGT
GGGTGGATTGTGAGATCCCACATAGGTTGGAGAGGAAAACAAACATTCTTTACGAGGGTGTGAAAACTTCATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTCTTCAAGCTGCCGTTCATGGCGGTGGCCTTGCTGCTGCTGCTCCTCCTCTCAGGCGACATTAATGGAGAAGCCAATACCAATACCAATACCGTGAAGCTACC
AAGCCAAGCAACCAAAGACGGCAACAGACAAATGAAAGAGCAACGTAGGATGAGGCCATTCCATGTGTTCATGTCCAGTAAGAGGAAGCGCACTCGCGACGCCGTTATCA
GCCGTCTGATCGAAACCCTTTCCTCCCCTTCAATGTTCTCTAAGCGATACGGCACTATTCCAGCGGACGAAGCTGCTTTTGTCGCGCTAAGCATCGAGGAGGAGGCGTAT
GCCATTACCAATGGCTTCCCTGCCACCATGGACGACGGCATCGACATTCTCCAGGCCTCTACTCTAAGCAGATCAGGAAGCTTGGAAGAGAAATTTCAGAGAGGACAATA
TCTACTAGCGGTGGACTGTTATGGGTGTGCCAGCGAGGATGCTGGCCCCGAAGGGGAGTGGATGGTGAGATTTCATATCGATTCGAGAGAGGAACGAGTCTCCCAAAGGT
GGGTGGATTGTGAGATCCCACATAGGTTGGAGAGGAAAACAAACATTCTTTACGAGGGTGTGAAAACTTCATCCTAG
Protein sequenceShow/hide protein sequence
MRFFKLPFMAVALLLLLLLSGDINGEANTNTNTVKLPSQATKDGNRQMKEQRRMRPFHVFMSSKRKRTRDAVISRLIETLSSPSMFSKRYGTIPADEAAFVALSIEEEAY
AITNGFPATMDDGIDILQASTLSRSGSLEEKFQRGQYLLAVDCYGCASEDAGPEGEWMVRFHIDSREERVSQRWVDCEIPHRLERKTNILYEGVKTSS