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Carg27317 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27317
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:3447292..3449196
RNA-Seq ExpressionCarg27317
SyntenyCarg27317
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020583.1 hypothetical protein SDJN02_17269, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0959.22Show/hide
Query:  KKKKKKKKRKKSGQL-----------HFPPRRSLKLKLLILASFPA-----WLLGFSSRSLLHRSDPFLLLSPFN-SNFHL-VCVVVSSFLAEVFNARAE
        KKKKKKKKRKKSGQ+            F  R  LKLK    AS+P+      LLGFSS+ LLHRSDPF    PF  SNFHL V  ++SSFLAEVFNARAE
Subjt:  KKKKKKKKRKKSGQL-----------HFPPRRSLKLKLLILASFPA-----WLLGFSSRSLLHRSDPFLLLSPFN-SNFHL-VCVVVSSFLAEVFNARAE

Query:  LAD
        LAD
Subjt:  LAD
KAG7020588.1 hypothetical protein SDJN02_17274, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-63100Show/hide
Query:  MKKKKKKKKKKKRKKSGQLHFPPRRSLKLKLLILASFPAWLLGFSSRSLLHRSDPFLLLSPFNSNFHLVCVVVSSFLAEVFNARAELADEYEYWFKPHIF
        MKKKKKKKKKKKRKKSGQLHFPPRRSLKLKLLILASFPAWLLGFSSRSLLHRSDPFLLLSPFNSNFHLVCVVVSSFLAEVFNARAELADEYEYWFKPHIF
Subjt:  MKKKKKKKKKKKRKKSGQLHFPPRRSLKLKLLILASFPAWLLGFSSRSLLHRSDPFLLLSPFNSNFHLVCVVVSSFLAEVFNARAELADEYEYWFKPHIF

Query:  FFVLLRLLSLKQIYFPFRFDFLKGYIDREKGLVL
        FFVLLRLLSLKQIYFPFRFDFLKGYIDREKGLVL
Subjt:  FFVLLRLLSLKQIYFPFRFDFLKGYIDREKGLVL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGTGGTCAACTCCACTTTCCTCCAAGGAGATCCCTCAAGCTTAAACTTCTTATCCTCGCTTCATT
TCCGGCATGGCTTCTTGGGTTTTCGTCCAGATCACTTCTTCATAGATCGGACCCTTTTCTCCTCCTTTCTCCTTTTAATTCAAATTTCCATCTTGTTTGCGTGGTTGTGT
CTTCTTTTCTGGCGGAGGTTTTTAATGCGAGAGCTGAATTAGCGGATGAATATGAATACTGGTTTAAACCTCATATCTTCTTCTTCGTCCTTCTTCGTCTTCTTTCGCTG
AAACAAATATATTTTCCTTTTCGTTTCGATTTTCTTAAAGGGTATATCGATAGGGAAAAGGGTTTGGTGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGTGGTCAACTCCACTTTCCTCCAAGGAGATCCCTCAAGCTTAAACTTCTTATCCTCGCTTCATT
TCCGGCATGGCTTCTTGGGTTTTCGTCCAGATCACTTCTTCATAGATCGGACCCTTTTCTCCTCCTTTCTCCTTTTAATTCAAATTTCCATCTTGTTTGCGTGGTTGTGT
CTTCTTTTCTGGCGGAGGTTTTTAATGCGAGAGCTGAATTAGCGGATGAATATGAATACTGGTTTAAACCTCATATCTTCTTCTTCGTCCTTCTTCGTCTTCTTTCGCTG
AAACAAATATATTTTCCTTTTCGTTTCGATTTTCTTAAAGGGTATATCGATAGGGAAAAGGGTTTGGTGTTATGATTCTTCCATATTGAATTCTGAACTCATCTTATCGC
GATTCAGGATGATTGATTCTTCTAATGACGTCACAAATTTATGATATATAGTTTGAGCGCCTTGGATTTCTCGCGCCCCTCCGCCCTTACACCACTGCTACTTTTTCTAG
GTTGTTTGAATTTGAAACTTCTCATTTCCACTTGTTTTGAATCATCAGTTGGGTTAGTTCTTTGCCTCAATTTGTGAGTCTGATTTATCGATTCTAGGGATTCATTTCTG
TAGCTTCCATGTCCTTTATTGTTTCTCTTCTTGTGGTGCCTTCGCTGTTCTATAACCACAATCTTGTGCTATTCATGATATCAATGTGAAAATAGGATTAGGAACTGTAT
TTATGTTAGAAGAGTTCGGTCCAGTCATATTATCGACTATGATATTTCACCTCTGTTGTTGCTATTACGATCTCTTGTTCTGGACGCTTCACTTCTTATAATTTATATTC
GATTTTCTAGGCATCGTAGGAGACTGCAATACTCACAGTTTATTGGATAAGATATCATTCAACATTTAGACAATATTGCAGGATTCCAGTTTTACATTGTTTTAAAGCGC
GGTGAAATCGGTGTTTCTTCTGATGCTAACATTTGATGTTTCTAGTGTTCGATACTGTAATTTTCTTGTATATACTCATCATGTACATTGCTAACTGTTCGTAACGCGAA
ATAAATTTGAAGGTTGATTTGTGCTTATTATTAAGCTCTTGGCTTGTTGTTGCTATGGCTTAAAACATTGGAGAGAAGAGAATGAGTATTGCTTGGTTGTTTGCATGTGC
TAGCTAAGGTCAATCTGGTTTGGGGAATGAATCCTGTAACTCATTTAAGAATGGTTATGAATTGCTGATGGCAAATGTTACTCGGTCTTTGG
Protein sequenceShow/hide protein sequence
MKKKKKKKKKKKRKKSGQLHFPPRRSLKLKLLILASFPAWLLGFSSRSLLHRSDPFLLLSPFNSNFHLVCVVVSSFLAEVFNARAELADEYEYWFKPHIFFFVLLRLLSL
KQIYFPFRFDFLKGYIDREKGLVL