; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27320 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27320
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein
Genome locationCarg_Chr17:7636124..7639940
RNA-Seq ExpressionCarg27320
SyntenyCarg27320
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR005878 - Ribosomal protein L1, bacterial-type
IPR016095 - Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023673 - Ribosomal protein L1, conserved site
IPR023674 - Ribosomal protein L1-like
IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575704.1 50S ribosomal protein L1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.5e-16598.72Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        S DDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

KAG7014262.1 50S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.8e-168100Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAIV
        SEDDLLVNLLAAIV
Subjt:  SEDDLLVNLLAAIV

XP_022954232.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata]3.1e-16799.68Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASST HIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        SEDDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

XP_022991908.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima]1.1e-16498.08Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGE+NDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESK+EYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        SEDDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

XP_023549332.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo]6.5e-16598.4Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFA RPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        SEDDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

TrEMBL top hitse value%identityAlignment
A0A0A0K886 Ribosomal protein1.4e-14488.22Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND
        MAMA  +PT+ S L MA TSSVHP D SSL + RPIAASST +IFSLCHPL LQRRGGRSINWVDL F RE R HLVVAALAAEIEV E V+ENGEE N 
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND

Query:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        G A S+ PKIK+GKAALPLKRDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQTS TKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEK DEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSEDDLLVNLLAAI
        FSEDDLLVNLL+AI
Subjt:  FSEDDLLVNLLAAI

A0A5D3CGN7 Ribosomal protein1.3e-14588.85Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND
        MAMA  +PTV S   MA TSSVHP D SSL + RPIAASST +IFSLCHPL LQRRGGRS NWVDL F RE R HLVVAALAAEIEVAEVV+ENGEE N 
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND

Query:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        G A S  PKIK+GKAALPLKRDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQTS TKF ETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSEDDLLVNLLAAI
        FSEDDLLVNLL+AI
Subjt:  FSEDDLLVNLLAAI

A0A6J1DG73 Ribosomal protein8.4e-15090.45Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D
        MAMA  SPT  S L MA TSSVHP D+ SL + RP+AASST  IFSLCHPLT+QRRGGRSINWVDLNFRRESR HLVVAALAAEIEVAEVV+ENGEE   
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D

Query:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        GLA S+ PK+KRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQ S TKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSEDDLLVNLLAAI
        FSEDDLLVNLLAA+
Subjt:  FSEDDLLVNLLAAI

A0A6J1GQH4 Ribosomal protein1.5e-16799.68Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASST HIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        SEDDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

A0A6J1JXL6 Ribosomal protein5.4e-16598.08Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGE+NDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESK+EYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SEDDLLVNLLAAI
        SEDDLLVNLLAAI
Subjt:  SEDDLLVNLLAAI

SwissProt top hitse value%identityAlignment
B0JNQ5 50S ribosomal protein L16.3e-6265.78Show/hide
Query:  SKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI
        S+R  + Q   E+ K Y+   A++LLK+ +  KF ETAEAH RL IDPKY DQQLR TV+LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I
Subjt:  SKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI

Query:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLA
          G M+F+ LIA+PDMMPKVA LG+ LGPRGLMP+PK GTVTT++  AIAEFK GK+EFRAD+TGIVH+ FGKA FS +DLLVNL A
Subjt:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLA

P49208 50S ribosomal protein L1, chloroplastic (Fragment)7.0e-7787.5Show/hide
Query:  IKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAK
        +++GK    LK DR RSKRFLEIQKLRE KKEYDLKTAISL+K+T+KTKFVET EAHFRLNIDPKYNDQQLRATV+LPKGTG+ +KVAVLTQGE+FDEAK
Subjt:  IKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAK

Query:  NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF
        NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIAEF
Subjt:  NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF

Q3MA18 50S ribosomal protein L11.4e-6165.78Show/hide
Query:  SKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI
        S+R  E+Q   E  +EY    A+SLLK+T+  KF E AEAH RL IDPKY DQQLR TV LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I
Subjt:  SKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI

Query:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLA
        + G M+FDKLIA+PD+MP+VA LGK+LGPRGLMP+PK GTVT +I  AIAEFK GK+EFRAD+TGIVH+ FGKA FS +DLLVNL A
Subjt:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLA

Q9LE95 50S ribosomal protein L1, chloroplastic1.4e-9865.46Show/hide
Query:  LAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHL---VVAALAAEIEVAEVVDENGEENDGLAASIAP-KI
        L  A +S  +  D S     +P+  +S     SLC  LTL +R    + WVD   +++S   +   V+AA+AAE EVA++ +E G E+ G+A   +P K 
Subjt:  LAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHL---VVAALAAEIEVAEVVDENGEENDGLAASIAP-KI

Query:  KRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKN
        K+GKAALPLK DRTRSKRFLEIQKLRE K+EYDLKTA+SL+KQ S TKFVETAEAHFRLNIDPKYNDQQLRATV+LPKGTG+TVK+AVL QG+K DEAK 
Subjt:  KRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKN

Query:  AGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNL
        AGAD+VGGE+LIEQIKGGFM+FDKLIA+ DMM KVASLG++LGPRGLMP PKAGTVT N+ QA+ EFK+GKVEFR DKTGIVH+PFGK +F E+DLL+NL
Subjt:  AGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNL

Query:  LAAI
         A I
Subjt:  LAAI

Q9LY66 50S ribosomal protein L1, chloroplastic3.9e-9675.82Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQT+ T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLAAI
        PQAI EFK+GKVEFRADKTGIVH+PFGK +F+E+DLL+N LAA+
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLAAI

Arabidopsis top hitse value%identityAlignment
AT2G42710.1 Ribosomal protein L1p/L10e family4.7e-3644.69Show/hide
Query:  KLRESKKE-YDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI-KGGFME
        +L+  KK  +DL  AI  +K  +K KF ET EAH RL I+   ++  +R T+ LP    + VKVA   +G   ++AK AGAD+VGG +LIE+I K G ++
Subjt:  KLRESKKE-YDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI-KGGFME

Query:  FDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNL
        FD+ +A+P MMP+V  + ++L   GLMPNPK G+VT ++ +A+ + K G  +FR DKT I+H+P GK  FSE+ L  N+
Subjt:  FDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNL

AT3G63490.1 Ribosomal protein L1p/L10e family2.8e-9775.82Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQT+ T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLAAI
        PQAI EFK+GKVEFRADKTGIVH+PFGK +F+E+DLL+N LAA+
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLAAI

AT3G63490.2 Ribosomal protein L1p/L10e family2.2e-7869.74Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQT+ T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGK
        PQ+    ++GK+     K G+     GK
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCCGGTTATAGCCCCACTGTGCCCTCACCCCTTGCCATGGCCCGCACTTCTTCAGTGCATCCTCTGGACCTTTCTTCCCTTTTCGCCGTCAGGCCGATTGC
TGCCTCTTCCACCACCCACATCTTCTCTTTATGCCACCCCTTAACTCTGCAGCGCAGGGGAGGGAGGTCTATCAATTGGGTCGACCTTAATTTTAGAAGAGAATCTAGGG
TTCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAAGTGGCTGAGGTTGTGGATGAGAATGGAGAGGAGAATGATGGATTAGCTGCTTCAATTGCGCCCAAGATTAAG
AGGGGAAAGGCTGCATTGCCTCTTAAGAGGGACAGGACCAGATCAAAGAGGTTCCTGGAAATTCAAAAATTGAGGGAAAGTAAAAAGGAGTATGACCTGAAAACAGCAAT
ATCTTTGTTGAAACAAACGTCTAAGACGAAATTCGTGGAAACCGCCGAAGCCCACTTCCGATTAAACATCGATCCCAAATATAACGATCAACAGCTGAGAGCAACAGTAA
ATCTTCCCAAGGGAACTGGACAGACAGTCAAGGTAGCTGTGCTTACTCAAGGTGAAAAATTCGACGAAGCGAAAAACGCAGGAGCTGATTTGGTTGGCGGTGAGGATTTG
ATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGCTAATTGCTTCACCAGATATGATGCCCAAGGTTGCTAGTCTAGGTAAGCTTCTAGGACCTCGAGGACTGAT
GCCGAACCCAAAAGCTGGCACCGTTACGACAAATATACCTCAGGCTATAGCAGAATTCAAGCAGGGAAAAGTCGAATTCCGAGCGGATAAAACCGGGATTGTTCACTTAC
CTTTCGGGAAGGCAGACTTTTCGGAAGATGACCTCCTCGTGAACTTGCTTGCTGCAATAGTATAA
mRNA sequenceShow/hide mRNA sequence
TATTGATGACTGCGCGAAACATCCAATACAGAGCCTCTCTTATCTCTTCCATTTCTTTGTTGATAGACTCCCAGAAACCTCTTCTTCTTCTTTGATCGACGGACTGAGCT
CTTTCTTCCTCCATGGCAATGGCCGGTTATAGCCCCACTGTGCCCTCACCCCTTGCCATGGCCCGCACTTCTTCAGTGCATCCTCTGGACCTTTCTTCCCTTTTCGCCGT
CAGGCCGATTGCTGCCTCTTCCACCACCCACATCTTCTCTTTATGCCACCCCTTAACTCTGCAGCGCAGGGGAGGGAGGTCTATCAATTGGGTCGACCTTAATTTTAGAA
GAGAATCTAGGGTTCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAAGTGGCTGAGGTTGTGGATGAGAATGGAGAGGAGAATGATGGATTAGCTGCTTCAATTGCG
CCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTTAAGAGGGACAGGACCAGATCAAAGAGGTTCCTGGAAATTCAAAAATTGAGGGAAAGTAAAAAGGAGTATGACCT
GAAAACAGCAATATCTTTGTTGAAACAAACGTCTAAGACGAAATTCGTGGAAACCGCCGAAGCCCACTTCCGATTAAACATCGATCCCAAATATAACGATCAACAGCTGA
GAGCAACAGTAAATCTTCCCAAGGGAACTGGACAGACAGTCAAGGTAGCTGTGCTTACTCAAGGTGAAAAATTCGACGAAGCGAAAAACGCAGGAGCTGATTTGGTTGGC
GGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGCTAATTGCTTCACCAGATATGATGCCCAAGGTTGCTAGTCTAGGTAAGCTTCTAGGACC
TCGAGGACTGATGCCGAACCCAAAAGCTGGCACCGTTACGACAAATATACCTCAGGCTATAGCAGAATTCAAGCAGGGAAAAGTCGAATTCCGAGCGGATAAAACCGGGA
TTGTTCACTTACCTTTCGGGAAGGCAGACTTTTCGGAAGATGACCTCCTCGTGAACTTGCTTGCTGCAATAGTATAAATCAGTGAGGTAAACAAGCCAACAGGTGCTAAA
GGAGTATACTGGAAGAGCGCGCATATATGCTCGTCGATGGGGCCTTCGATTCGATTAAACATAAGGGAAATGCTTGATTACAAGATCCCATCATCAAATGCTTGAAGAAT
TTTAGTCTACAACTGTAAATGTCTTCTTCTTCAATTTGTTTAATATTAGCCCTCGTGCATACGCCTTTCGAATCGTCTTCAGCGGCCGAAGATTTCGTTAAGATCGTTAA
CAGAGTTGGTATGGTATCTCAATAAAGAATTTGAAACTTGGAAACTGCATATTCATTTGTTTCTGAACTGATTCAAAAGTAGCTCAGAATCAATCATTTTCACCTCATCT
GATTATTGTTTATTTCTCAATTTTTTAGTTTATGTTAGTTTTTTGTTATGGAAAAATATGGTTATAGCTTTTTTTTTGTTATGTTTAGTTCATGTCAATTGGATAAAAGT
TCAAAATGCGTGCAAAATGCAAGCGGAA
Protein sequenceShow/hide protein sequence
MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIAPKIK
RGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQTSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDL
IEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSEDDLLVNLLAAIV