; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27331 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27331
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein DCL homolog, chloroplastic-like
Genome locationCarg_Chr09:996609..1000054
RNA-Seq ExpressionCarg27331
SyntenyCarg27331
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024257.1 Protein DCL, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.8e-140100Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFRQADFLELFHHQQQQQEEVLK
        LIRKNYPLHAESFILRHFQRRRRNFFRQADFLELFHHQQQQQEEVLK
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFRQADFLELFHHQQQQQEEVLK

XP_022937348.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata]2.9e-12899.56Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRKNYPLHAESFILRHFQRRRR+FFR
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

XP_022975974.1 protein DCL homolog, chloroplastic-like [Cucurbita maxima]6.1e-12697.8Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDY+SSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKY SGDRL+PEHEKTILDRLL YHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRKNYPLHAESFILRHFQRRRR+FFR
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

XP_023536599.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]5.2e-12597.36Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFH SIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA+DLAT SEDY+SSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLL YHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRKNYPLHAESFILRHFQRRRR+FFR
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]2.0e-10885.9Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        M++AMASILKPPP VP HSLNPN  N+SPVI+CF T PMTSFH S RALKTGPEGSRIRSHEEYSSDLLRKPVVPPA DLA  SED  SSEESGN DEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        E+WVDWED+ILE+TVPLVGFVRMVLHSGKY SGDRL PEHEKTILDRLL YHPE EKKIGCGIDYITIGYHP+FE SRCLFIVRKDGELVDFSYWKC++G
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRK YPLHAESFILRHF+RRRRNF R
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein3.2e-10481.53Show/hide
Query:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE
        +AMASILKPPP  P HSLNPN  N+SP+I+CF THP+ SFHPS RALKTGPEG R+RSH+EYSSDLLRKPV P A DLA PSED  SSEESGN DEEE E
Subjt:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE

Query:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI
        WVDWED+ILE+TVPLVGFVRMVLH+GKYE+GDRL PEHEKTIL+RLL YHPE EKKIGCG+DYIT+GYHP+FE SRCLFIVRKDGE+VDFSYWKC++GLI
Subjt:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI

Query:  RKNYPLHAESFILRHFQRRRRN
        RKNYPL+AESFILRHF+RRRRN
Subjt:  RKNYPLHAESFILRHFQRRRRN

A0A5A7VDC9 Protein DCL9.3e-10481.33Show/hide
Query:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE
        +AMASIL   P  P HSLNPN  N+SP+I+CF THP+ SFHPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPA DLA PSED  SSEESGN +EEE +
Subjt:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE

Query:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI
        WVDWED+ILE+TVPLVGFVRMVLH+GKYESGDRL PEHEKTIL+RLL YHPE EKKIGCG+DYIT+GYHP+FE SRCLFIVRKDGELVDFSYWKC++GLI
Subjt:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI

Query:  RKNYPLHAESFILRHFQRRRRNFFR
        RKNYPL+AESFILRHF+RRRRN  R
Subjt:  RKNYPLHAESFILRHFQRRRRNFFR

A0A6J1BTU2 protein DCL homolog, chloroplastic5.8e-10683.86Show/hide
Query:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE
        +AMAS+ KPPP  P HSLNP+ LN+SPVI+CF  HPMTS HPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA D A  SED   SEESG   EEEE+
Subjt:  LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEE

Query:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI
        WVDWED+ILE+TVPLVGFVRMVLHSGKY SGDRL+ EHEKTILDRLL YHPECEKKIGCGIDYITIGYHP+FE SRCLFIVRKDGELVDFSYWKC++GLI
Subjt:  WVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI

Query:  RKNYPLHAESFILRHFQRRRRNF
        RKNYPLHAESFILRHF+RRRRN+
Subjt:  RKNYPLHAESFILRHFQRRRRNF

A0A6J1FFU9 protein DCL homolog, chloroplastic-like1.4e-12899.56Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRKNYPLHAESFILRHFQRRRR+FFR
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

A0A6J1IM57 protein DCL homolog, chloroplastic-like3.0e-12697.8Show/hide
Query:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE
        MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDY+SSEESGNGDEEE
Subjt:  MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEE

Query:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
        EEWVDWEDRILEETVPLVGFVRMVLHSGKY SGDRL+PEHEKTILDRLL YHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG
Subjt:  EEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEG

Query:  LIRKNYPLHAESFILRHFQRRRRNFFR
        LIRKNYPLHAESFILRHFQRRRR+FFR
Subjt:  LIRKNYPLHAESFILRHFQRRRRNFFR

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic2.6e-6666.11Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDY---SSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTI
        A+KTG EG  IRS    +++LLRKPV+   ++  + SE+     S +E G    + E WVDWED+ILE+TVPLVGFVRM+LHSGKY  GDRL+P+H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDY---SSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTI

Query:  LDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN
        L RLL YHPEC+KKIG G+DYIT+GYHP+FE SRCLFIVRKDGE VDFSYWKC++GLIRKNYPL+A+SFILRHF++RRRN
Subjt:  LDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN

Q5D869 DNA-directed RNA polymerase V subunit 11.6e-2036.21Show/hide
Query:  EDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNY
        E  +L +  P++  +R ++H   Y  GD ++ + +  +L+++L++HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNY

Query:  PLHAESFILRHFQRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFQRRR

Q8L557 Protein EMBRYO DEFECTIVE 5145.1e-0627.27Show/hide
Query:  PAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDR----------------ILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKI
        P  +      +   +EE  NG E +++ V  E++                + +  V  + F    L   KYE            +LD +   H E EKKI
Subjt:  PAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDR----------------ILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKI

Query:  GCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI
        G GI    +  HP + +SRC F+VR+D    DFS+ KC++ ++
Subjt:  GCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI

Q9C642 Protein DCL homolog, chloroplastic2.6e-6658.79Show/hide
Query:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL
        ++SP+ + F     TS  P +RAL+T  +G++I + E Y S+LLR+P +          E     EE    + E +E+VDWED+ILE TVPLVGFVRM+L
Subjt:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL

Query:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN
        HSGKY + DRL+PEHE+TI++ LL YHPECEKKIGCGIDYI +G+HP+FE SRC+FIVRKDGE+VDFSYWKC++GLI+K YPL+A+SFILRHF++RR+N
Subjt:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.8e-6758.79Show/hide
Query:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL
        ++SP+ + F     TS  P +RAL+T  +G++I + E Y S+LLR+P +          E     EE    + E +E+VDWED+ILE TVPLVGFVRM+L
Subjt:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL

Query:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN
        HSGKY + DRL+PEHE+TI++ LL YHPECEKKIGCGIDYI +G+HP+FE SRC+FIVRKDGE+VDFSYWKC++GLI+K YPL+A+SFILRHF++RR+N
Subjt:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN

AT1G45230.2 Protein of unknown function (DUF3223)1.5e-6658.29Show/hide
Query:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL
        ++SP+ + F     TS  P +RAL+T  +G++I + E Y S+LLR+P +          E     EE    + E +E+VDWED+ILE TVPLVGFVRM+L
Subjt:  NASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVL

Query:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN
        HSGKY + DRL+PEHE+TI++ LL YHPECEKKIGCGIDYI + +HP+FE SRC+FIVRKDGE+VDFSYWKC++GLI+K YPL+A+SFILRHF++RR+N
Subjt:  HSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRN

AT2G40030.1 nuclear RNA polymerase D1B1.2e-2136.21Show/hide
Query:  EDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNY
        E  +L +  P++  +R ++H   Y  GD ++ + +  +L+++L++HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNY

Query:  PLHAESFILRHFQRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFQRRR

AT3G46630.1 Protein of unknown function (DUF3223)3.6e-3143.75Show/hide
Query:  AMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFER
        AM++ +P  D S   E    D +  +W + E  IL +  P+    + +LHS +Y  G+RL  E EK ++++LL YHP  + KIGCG+D+I +  HP F  
Subjt:  AMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFER

Query:  SRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQR
        SRCLF+VR DG  +DFSY KC+   +R  YP HAE FI  HF+R
Subjt:  SRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQR

AT5G62440.1 Protein of unknown function (DUF3223)3.6e-0727.27Show/hide
Query:  PAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDR----------------ILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKI
        P  +      +   +EE  NG E +++ V  E++                + +  V  + F    L   KYE            +LD +   H E EKKI
Subjt:  PAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDR----------------ILEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKI

Query:  GCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI
        G GI    +  HP + +SRC F+VR+D    DFS+ KC++ ++
Subjt:  GCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTGGCTATGGCCTCCATTTTGAAGCCACCGCCTCTTGTGCCCCTTCACTCCCTAAATCCAAACCTCCTCAACGCTTCACCAGTGATCGTATGTTTTCGTACGCA
CCCCATGACGTCGTTTCACCCATCCATTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTAGGATTCGAAGCCACGAAGAATATAGTTCCGATTTGCTGCGAAAACCGGTTG
TGCCGCCGGCGATGGACCTGGCTACACCATCGGAGGATTACAGCAGCAGTGAGGAGAGTGGAAACGGAGACGAGGAGGAAGAGGAATGGGTTGACTGGGAGGACAGGATT
CTGGAGGAGACTGTTCCTCTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATATGAAAGTGGGGATAGGTTGACCCCAGAGCACGAGAAAACAATTCTTGATCG
GTTGCTTTCATATCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGATTGGATATCATCCGAATTTTGAAAGGTCAAGATGTTTATTCATAGTCA
GAAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCATGGAGGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTTATTCTTCGGCATTTTCAGCGA
CGTAGACGCAATTTTTTTCGGCAGGCAGATTTTCTAGAACTGTTCCACCATCAGCAGCAGCAGCAGGAGGAGGTGCTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AATGCGGATTGAAGAGAAATATTGTAGAATCTCCAAAACCATGAGATTGATGATAATGTGAGTCACCATTAACAGTTATTTTTCCTCCGTTTTCTAAGGGAATTGGGTGA
AAAACCTCAGTAGTTGCAAATTTGAGCTCCTTGATTCAATTGAACAAGGGCATGGTCCTGGCTATGGCCTCCATTTTGAAGCCACCGCCTCTTGTGCCCCTTCACTCCCT
AAATCCAAACCTCCTCAACGCTTCACCAGTGATCGTATGTTTTCGTACGCACCCCATGACGTCGTTTCACCCATCCATTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTA
GGATTCGAAGCCACGAAGAATATAGTTCCGATTTGCTGCGAAAACCGGTTGTGCCGCCGGCGATGGACCTGGCTACACCATCGGAGGATTACAGCAGCAGTGAGGAGAGT
GGAAACGGAGACGAGGAGGAAGAGGAATGGGTTGACTGGGAGGACAGGATTCTGGAGGAGACTGTTCCTCTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATA
TGAAAGTGGGGATAGGTTGACCCCAGAGCACGAGAAAACAATTCTTGATCGGTTGCTTTCATATCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATTGATTATATCA
CGATTGGATATCATCCGAATTTTGAAAGGTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCATGGAGGGTCTGATCAGA
AAGAACTATCCTCTTCATGCAGAAAGCTTTATTCTTCGGCATTTTCAGCGACGTAGACGCAATTTTTTTCGGCAGGCAGATTTTCTAGAACTGTTCCACCATCAGCAGCA
GCAGCAGGAGGAGGTGCTGAAGTAA
Protein sequenceShow/hide protein sequence
MVLAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRI
LEETVPLVGFVRMVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFIVRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQR
RRRNFFRQADFLELFHHQQQQQEEVLK