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Carg27356 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27356
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGnk2-homologous domain-containing protein
Genome locationCarg_Chr02:9980303..9980707
RNA-Seq ExpressionCarg27356
SyntenyCarg27356
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR002902 - Gnk2-homologous domain
IPR038408 - Gnk2-homologous domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057296.1 antifungal protein ginkbilobin-2-like [Cucumis melo var. makuwa]1.8e-5580.6Show/hide
Query:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
        M+G SLKIS AFLA F    MVVS+PNTGV+SVLCNSG FTGGDPFAVSLDYVLKEL+S+TPT  NYDFYNISPYPN+FAYGHASCNQ+LTTSDCT+CL 
Subjt:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG

Query:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        AA+ NMLGSCQ RIG R+VLNDC+IRYEQ PFDD
Subjt:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD

KAG6606427.1 Antifungal protein ginkbilobin-like protein, partial [Cucurbita argyrosperma subsp. sororia]9.9e-70100Show/hide
Query:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
        MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
Subjt:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG

Query:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
Subjt:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD

KGN47889.1 hypothetical protein Csa_003100 [Cucumis sativus]2.1e-5681.34Show/hide
Query:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
        M+G SLKIS AFLA F    MVVS+PNTGV+SVLCNSG FTGGDPF VSLDYVLKEL+S+TPT  NYDFYNISPYPN+FAYGHASCNQ+L+TSDCTTCL 
Subjt:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG

Query:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        AAK NMLGSCQMRIG R+VLNDC+IRYEQ PFDD
Subjt:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD

XP_022931011.1 antifungal protein ginkbilobin-2-like [Cucurbita moschata]6.0e-59100Show/hide
Query:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL
        MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL
Subjt:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL

Query:  NDCSIRYEQNPFDD
        NDCSIRYEQNPFDD
Subjt:  NDCSIRYEQNPFDD

XP_038887019.1 antifungal protein ginkbilobin-like protein [Benincasa hispida]2.1e-5188.6Show/hide
Query:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL
        MVVSVPNTGV+SVLCNSG FTGGDPFAVSLDYVLKELESSTPT   YDFYNISPYPNSFAYGHASCNQ+LTTSDCT CLGAAKTNMLG+CQM IG RAVL
Subjt:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL

Query:  NDCSIRYEQNPFDD
        +DC IRYEQ PFDD
Subjt:  NDCSIRYEQNPFDD

TrEMBL top hitse value%identityAlignment
A0A0A0KGA2 Gnk2-homologous domain-containing protein1.0e-5681.34Show/hide
Query:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
        M+G SLKIS AFLA F    MVVS+PNTGV+SVLCNSG FTGGDPF VSLDYVLKEL+S+TPT  NYDFYNISPYPN+FAYGHASCNQ+L+TSDCTTCL 
Subjt:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG

Query:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        AAK NMLGSCQMRIG R+VLNDC+IRYEQ PFDD
Subjt:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD

A0A251N2S2 Gnk2-homologous domain-containing protein9.1e-4569.53Show/hide
Query:  LKISAAFLALF-GFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKT
        +KI+A  + +F GFF +  S P+T + SVLCNSG++T GDPFAVSL YVLKELE++T T  NYDFY+ISPYPN+FAYGHASCNQ++TT DCTTCLGAAKT
Subjt:  LKISAAFLALF-GFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKT

Query:  NMLGSCQMRIGARAVLNDCSIRYEQNPF
        +MLG+CQ  IG RAVL DC+IRYEQ PF
Subjt:  NMLGSCQMRIGARAVLNDCSIRYEQNPF

A0A5D3CNH9 Antifungal protein ginkbilobin-2-like8.7e-5680.6Show/hide
Query:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG
        M+G SLKIS AFLA F    MVVS+PNTGV+SVLCNSG FTGGDPFAVSLDYVLKEL+S+TPT  NYDFYNISPYPN+FAYGHASCNQ+LTTSDCT+CL 
Subjt:  MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLG

Query:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        AA+ NMLGSCQ RIG R+VLNDC+IRYEQ PFDD
Subjt:  AAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD

A0A5E4EE49 PREDICTED: antifungal5.3e-4569.23Show/hide
Query:  LKISAAFLALF-GFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKT
        +KI+A  +  F GFF +  S P+T + SVLCNSG++T GDPFAVSL YVLKELE++T T  NYDFY+ISPYPN+FAYGHASCNQ++TT DCTTCLGAAKT
Subjt:  LKISAAFLALF-GFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKT

Query:  NMLGSCQMRIGARAVLNDCSIRYEQNPFDD
        +MLG+CQ  IG RAVL DC+IRYEQ PF D
Subjt:  NMLGSCQMRIGARAVLNDCSIRYEQNPFDD

A0A6J1ESI5 antifungal protein ginkbilobin-2-like2.9e-59100Show/hide
Query:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL
        MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL
Subjt:  MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVL

Query:  NDCSIRYEQNPFDD
        NDCSIRYEQNPFDD
Subjt:  NDCSIRYEQNPFDD

SwissProt top hitse value%identityAlignment
A4ZDL6 Antifungal protein ginkbilobin-23.7e-1133.08Show/hide
Query:  SLKISAAFLALFGFFA---MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNS--FAYGHASCNQSLTTSDCTTCL
        ++++++AF+  F   A   ++    NT   S  CN+     G PF  +L  +L +L  +T   + YD+            AYG A+C QS++ SDCT CL
Subjt:  SLKISAAFLALFGFFA---MVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNS--FAYGHASCNQSLTTSDCTTCL

Query:  GAAKTNMLGSCQMRIGARAVLNDCSIRYEQNPF
              +   C   IGAR  L DC I+YEQ  F
Subjt:  GAAKTNMLGSCQMRIGARAVLNDCSIRYEQNPF

A9NQT1 Antifungal protein ginkbilobin-like protein 13.7e-1135.71Show/hide
Query:  SLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTN-NYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK
        S   + A + L    A     PNT   S  CN+     G+PF  +L  +L  LE +T  +  +Y            AYG   C QS++ SDCT CL    
Subjt:  SLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTN-NYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK

Query:  TNMLGSCQMRIGARAVLNDCSIRYEQ
          + G C+  IGAR  L DC IRYEQ
Subjt:  TNMLGSCQMRIGARAVLNDCSIRYEQ

D9IWE0 Antifungal protein ginkbilobin-like protein2.0e-1240.91Show/hide
Query:  VSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVLND
        V  P T + S  CN      G  F  +L  +L +LE +T  ++ YD Y  S   +  AYG A CNQ L+ SDCT CL      +   C   IGAR  L D
Subjt:  VSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVLND

Query:  CSIRYEQNPF
        C IRYEQ  F
Subjt:  CSIRYEQNPF

Q3I3X0 Antifungal protein ginkbilobin-like protein (Fragment)2.8e-1137.61Show/hide
Query:  PNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNS--FAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVLNDC
        PNT   S  CN+     G+PF  +L  +L +L+ +T   + YD+            AYG A C  S++ SDCT CL      + G C   IGAR  L DC
Subjt:  PNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNS--FAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVLNDC

Query:  SIRYEQNPF
         I+YEQ+ F
Subjt:  SIRYEQNPF

Q40849 Antifungal protein ginkbilobin-like protein 18.2e-1133.33Show/hide
Query:  SLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTN-NYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK
        SL +  A + + G      + PNT   S  CN+     G+PF  +L  +L +L+ +T  +  +Y            AYG A C  S++ SDC+ CL    
Subjt:  SLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTN-NYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK

Query:  TNMLGSCQMRIGARAVLNDCSIRYEQNPF
          + G C   IGAR  L DC I+YEQ+ F
Subjt:  TNMLGSCQMRIGARAVLNDCSIRYEQNPF

Arabidopsis top hitse value%identityAlignment
AT3G60720.1 plasmodesmata-located protein 87.7e-0427.13Show/hide
Query:  FLALFGFFAMVVSVPNTGVKSVL----CNSGIFTGGDPFAVSLDYVLKEL--ESSTPTTNNYDFYN--ISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK
        F  LF FF    S  ++    +     C+   +T   PF  + D  L  +   SS  + N++   N   S   +S  +G   C   L +SDC+ C+  + 
Subjt:  FLALFGFFAMVVSVPNTGVKSVL----CNSGIFTGGDPFAVSLDYVLKEL--ESSTPTTNNYDFYN--ISPYPNSFAYGHASCNQSLTTSDCTTCLGAAK

Query:  TNMLGSCQMRIGARAVLNDCSIRYEQNPF
          +   C    GA   L  C +RYE N F
Subjt:  TNMLGSCQMRIGARAVLNDCSIRYEQNPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTTGTAGCCTGAAGATTTCAGCCGCTTTTCTGGCTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTC
AGGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAACAATTATGATTTCTACAACATATCTC
CTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTACAACCTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGGGTCGTGT
CAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAGAACCCATTTGATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTTGTAGCCTGAAGATTTCAGCCGCTTTTCTGGCTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTC
AGGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAACAATTATGATTTCTACAACATATCTC
CTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTACAACCTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGGGTCGTGT
CAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAGAACCCATTTGATGATTAG
Protein sequenceShow/hide protein sequence
MVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSC
QMRIGARAVLNDCSIRYEQNPFDD