; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27389 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27389
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB box-type domain-containing protein
Genome locationCarg_Chr15:8192040..8193667
RNA-Seq ExpressionCarg27389
SyntenyCarg27389
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger
IPR006734 - PLATZ transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579424.1 hypothetical protein SDJN03_23872, partial [Cucurbita argyrosperma subsp. sororia]2.6e-8677.33Show/hide
Query:  MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----
        MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCL CCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ     
Subjt:  MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----

Query:  ---------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPR
                                                     INHKTEITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPR
Subjt:  ---------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPR

Query:  CFPVVSDITTVVNRRKGVPQRSPLL
        CFPVVSDITTVVNRRKGVPQRSPLL
Subjt:  CFPVVSDITTVVNRRKGVPQRSPLL

KAG7016902.1 hypothetical protein SDJN02_22013 [Cucurbita argyrosperma subsp. argyrosperma]8.9e-95100Show/hide
Query:  MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINHKT
        MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINHKT
Subjt:  MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINHKT

Query:  EITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPLL
        EITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPLL
Subjt:  EITNKKHNNSDHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPLL

XP_008437715.1 PREDICTED: uncharacterized protein LOC103483060 [Cucumis melo]1.1e-4447.74Show/hide
Query:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------
        +V E  ++S+P+W+ ILLGEKFFTPC LH S  K+N+KTFFCL C SAICFSCFSSHR+HALLQIRRYVYHEVIRL DA+KL+NCSLVQ           
Subjt:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------

Query:  ----------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVK
                                                            +N K EI +K+  N ++LPP +T E          + ++  AA+K VK
Subjt:  ----------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVK

Query:  KK--RSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL
        KK  RSCVKSLA VLC+PRCFP +SD  T VNRRKGVP RSPL
Subjt:  KK--RSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL

XP_011654791.1 uncharacterized protein LOC101221644 [Cucumis sativus]1.6e-4346.37Show/hide
Query:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------
        +V E  ++S+P+W+ ILLGEKFFTPC LH S  K+N+KTFFCL C SAICFSCFSSHR+HALLQIRRYVYHEV+ LGDA+KL+NCSLVQ           
Subjt:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------

Query:  -----------------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAAT---------PA
                                                                   +N K EI NK+    ++LPP +T E    T          A
Subjt:  -----------------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAAT---------PA

Query:  AIKLVKK-KRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL
        A+KL KK  RSCVKSLA VLC+PRCFP +S   T VNRRKGVPQRSPL
Subjt:  AIKLVKK-KRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL

XP_038876089.1 uncharacterized protein LOC120068405 [Benincasa hispida]9.6e-4951.95Show/hide
Query:  DNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ---------------
        D ++S+P+WL ILL EKFFTPC LH S  K+N+KTFFCL CCSAICFSCFSSH +H  LQIRRYVYHEVIRLGDA+KLLNCSLVQ               
Subjt:  DNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ---------------

Query:  --------------------------------------INHKTEITNKKHNNSDHLPPPST--------------PEETAATPAAIKLVKKKRSCVKSLA
                                              +N K EI  K+  N D+LP  ST              P   + T AAIKLVKK RSCVKSLA
Subjt:  --------------------------------------INHKTEITNKKHNNSDHLPPPST--------------PEETAATPAAIKLVKKKRSCVKSLA

Query:  TVLCQPRCFPVVSDITTVVNRRKGVPQRSPL
         VLC+PRCFP +SDI T VNRRKGVPQRSPL
Subjt:  TVLCQPRCFPVVSDITTVVNRRKGVPQRSPL

TrEMBL top hitse value%identityAlignment
A0A0A0KKT3 B box-type domain-containing protein7.7e-4446.37Show/hide
Query:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------
        +V E  ++S+P+W+ ILLGEKFFTPC LH S  K+N+KTFFCL C SAICFSCFSSHR+HALLQIRRYVYHEV+ LGDA+KL+NCSLVQ           
Subjt:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------

Query:  -----------------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAAT---------PA
                                                                   +N K EI NK+    ++LPP +T E    T          A
Subjt:  -----------------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPEETAAT---------PA

Query:  AIKLVKK-KRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL
        A+KL KK  RSCVKSLA VLC+PRCFP +S   T VNRRKGVPQRSPL
Subjt:  AIKLVKK-KRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL

A0A1S3AUS9 uncharacterized protein LOC1034830605.3e-4547.74Show/hide
Query:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------
        +V E  ++S+P+W+ ILLGEKFFTPC LH S  K+N+KTFFCL C SAICFSCFSSHR+HALLQIRRYVYHEVIRL DA+KL+NCSLVQ           
Subjt:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ-----------

Query:  ----------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVK
                                                            +N K EI +K+  N ++LPP +T E          + ++  AA+K VK
Subjt:  ----------------------------------------------------INHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVK

Query:  KK--RSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL
        KK  RSCVKSLA VLC+PRCFP +SD  T VNRRKGVP RSPL
Subjt:  KK--RSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPL

A0A5A7TEM7 Putative PLATZ transcription factor family protein5.0e-3546.54Show/hide
Query:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVI--------------------------
        +V E  ++S+P+W+ ILLGEKFFTPC LH S  K+N+KTFFCL C SAICFSCFSSHR+HALLQI   VY   I                          
Subjt:  VVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVI--------------------------

Query:  ---RLGDAQKLLNCSLV--------QINHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVKKK--RSCVKSLATVLCQPRCFPVVSD
            +   +K+L   L         ++N K EI +K+  N ++LPP +T E          + ++  AA+K VKKK  RSCVKSLA VLC+PRCFP +SD
Subjt:  ---RLGDAQKLLNCSLV--------QINHKTEITNKKHNNSDHLPPPSTPE----------ETAATPAAIKLVKKK--RSCVKSLATVLCQPRCFPVVSD

Query:  ITTVVNRRKGVPQRSPL
          T VNRRKGVP RSPL
Subjt:  ITTVVNRRKGVPQRSPL

A0A7J8P4B5 Uncharacterized protein1.7e-2742.41Show/hide
Query:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINH--KTEI-TNKKHNN
        SS LP+WL +LL EKFF  C++H  ++K+NEK  +CL CC +IC +C S H SH LLQIRRYVYH+VIRL DA +L++C+ VQ+N   +TE   +K    
Subjt:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINH--KTEI-TNKKHNN

Query:  SDHLPPPS---------TP----------------EETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDIT-TVVNRRKGVPQRSPL
         + LP P          TP                E +  + A  ++V+KKRS +K+     C+P C P VS+++ +++NRRK  PQR+PL
Subjt:  SDHLPPPS---------TP----------------EETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDIT-TVVNRRKGVPQRSPL

A0A7J9BLC0 Uncharacterized protein1.7e-2742.41Show/hide
Query:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINH--KTEI-TNKKHNN
        SS LP+WL +LL EKFF  C++H  ++K+NEK  +CL CC +IC +C S H SH LLQIRRYVYH+VIRL DA +L++C+ VQ+N   +TE   +K    
Subjt:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINH--KTEI-TNKKHNN

Query:  SDHLPPPS---------TP----------------EETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDIT-TVVNRRKGVPQRSPL
         + LP P          TP                E +  + A  ++V+KKRS +K+     C+P C P VS+++ +++NRRK  PQR+PL
Subjt:  SDHLPPPS---------TP----------------EETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDIT-TVVNRRKGVPQRSPL

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 13.1e-1854.43Show/hide
Query:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        P WL  L  EKFF  C  H + +K+NE+   CL CC+++C  C  SHR H LLQ+RRYVYH+V+RL D QKL++CS VQ
Subjt:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ

Arabidopsis top hitse value%identityAlignment
AT1G31040.1 PLATZ transcription factor family protein2.0e-2053.16Show/hide
Query:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        P WL  L+ E FF+ C +H +  +++EK  FCL CC ++C  C  SHRSH LLQ+RRYVYH+V+RL D +KL++CS VQ
Subjt:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ

AT1G32700.1 PLATZ transcription factor family protein1.8e-1342.53Show/hide
Query:  EDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSA-ICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        E+ + + P WL  LL EKFF  C LH ++S ++E   +CL C +  +C  C S H+ H  +QIRR  YH+VIR+ + QK L+ + VQ
Subjt:  EDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSA-ICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ

AT1G76590.1 PLATZ transcription factor family protein5.3e-1343.18Show/hide
Query:  EDN-SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCS-AICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        EDN + + P WL  +L   +F PC +H++++K +E   FCL C S A C  C  +HR+H +LQIRR  YH V+R+ + QK ++ S VQ
Subjt:  EDN-SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCS-AICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ

AT2G12646.1 PLATZ transcription factor family protein2.2e-1954.43Show/hide
Query:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        P WL  L  EKFF  C  H + +K+NE+   CL CC+++C  C  SHR H LLQ+RRYVYH+V+RL D QKL++CS VQ
Subjt:  PQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ

AT3G60670.1 PLATZ transcription factor family protein6.9e-2154.22Show/hide
Query:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ
        S   P WL +LL +KFF  CL H  + K+NEK   C+ CC  IC  C SSH SH LLQIRRYVY +V+R+ D  KL++CSL+Q
Subjt:  SSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTATGGTGGGAGTAGTAGGAGAGGATAATTCTTCTTCACTTCCCCAATGGCTTCCAATTCTCTTGGGGGAGAAGTTCTTTACGCCATGTTTACTTCACTCCTC
TAATTCTAAGAGGAATGAAAAGACTTTCTTTTGCTTGTGTTGCTGCTCCGCCATTTGCTTCTCTTGCTTCTCTTCTCACCGCTCTCATGCCCTTCTTCAGATAAGAAGAT
ACGTTTACCACGAGGTTATAAGACTTGGAGACGCTCAGAAGTTGCTCAATTGTTCCCTTGTTCAAATCAATCACAAAACTGAAATAACCAATAAAAAACACAACAATTCT
GATCATCTTCCACCGCCATCCACACCTGAAGAAACCGCCGCCACCCCCGCCGCCATTAAGTTAGTTAAGAAGAAGCGTAGCTGTGTCAAATCGTTAGCCACGGTTCTGTG
TCAACCTAGATGCTTCCCCGTCGTCTCCGATATCACCACCGTCGTCAACCGCCGAAAGGGTGTTCCTCAAAGATCGCCTTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
AACTCCTTCAACTGTTCATCAATCTCTGCTTCCATTAGTACTTTCTCTGCATCATCTTCTTCTCTTATTCTCTGCTCCTTCTACAACGACTGTTCATACGCCATCAAAAT
ATGGTGGGTATGGTGGGAGTAGTAGGAGAGGATAATTCTTCTTCACTTCCCCAATGGCTTCCAATTCTCTTGGGGGAGAAGTTCTTTACGCCATGTTTACTTCACTCCTC
TAATTCTAAGAGGAATGAAAAGACTTTCTTTTGCTTGTGTTGCTGCTCCGCCATTTGCTTCTCTTGCTTCTCTTCTCACCGCTCTCATGCCCTTCTTCAGATAAGAAGAT
ACGTTTACCACGAGGTTATAAGACTTGGAGACGCTCAGAAGTTGCTCAATTGTTCCCTTGTTCAAATCAATCACAAAACTGAAATAACCAATAAAAAACACAACAATTCT
GATCATCTTCCACCGCCATCCACACCTGAAGAAACCGCCGCCACCCCCGCCGCCATTAAGTTAGTTAAGAAGAAGCGTAGCTGTGTCAAATCGTTAGCCACGGTTCTGTG
TCAACCTAGATGCTTCCCCGTCGTCTCCGATATCACCACCGTCGTCAACCGCCGAAAGGGTGTTCCTCAAAGATCGCCTTTGTTGTGA
Protein sequenceShow/hide protein sequence
MVGMVGVVGEDNSSSLPQWLPILLGEKFFTPCLLHSSNSKRNEKTFFCLCCCSAICFSCFSSHRSHALLQIRRYVYHEVIRLGDAQKLLNCSLVQINHKTEITNKKHNNS
DHLPPPSTPEETAATPAAIKLVKKKRSCVKSLATVLCQPRCFPVVSDITTVVNRRKGVPQRSPLL