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Carg27399 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27399
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTubulin glycylase
Genome locationCarg_Chr14:7386577..7389374
RNA-Seq ExpressionCarg27399
SyntenyCarg27399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581665.1 hypothetical protein SDJN03_21667, partial [Cucurbita argyrosperma subsp. sororia]3.8e-9097.04Show/hide
Query:  FPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWE
        F  + GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHAHGWE
Subjt:  FPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWE

Query:  EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
Subjt:  EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

KAG7018156.1 hypothetical protein SDJN02_20024 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-96100Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

XP_022930568.1 uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata]4.5e-9197.11Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFP   GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

XP_022980736.1 uncharacterized protein LOC111480016 isoform X1 [Cucurbita maxima]5.0e-9095.95Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFP   GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARFHSIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

XP_023515561.1 uncharacterized protein LOC111779684 isoform X1 [Cucurbita pepo subsp. pepo]2.9e-9096.53Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFP   GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

TrEMBL top hitse value%identityAlignment
A0A6J1ERU0 uncharacterized protein LOC111436977 isoform X22.0e-8998.78Show/hide
Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVK
        GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

A0A6J1EVL3 uncharacterized protein LOC111436977 isoform X12.2e-9197.11Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFP   GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

A0A6J1IS39 uncharacterized protein LOC111480016 isoform X22.3e-8897.56Show/hide
Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVK
        GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARFHSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        MVEKKHGKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

A0A6J1IUF0 uncharacterized protein LOC111480016 isoform X12.4e-9095.95Show/hide
Query:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA
        MIIAFP   GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARFHSIVHA
Subjt:  MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHA

Query:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        HGWEEDVVKMVEKKHGKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  HGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

A0A6J1J065 uncharacterized protein LOC111480016 isoform X33.0e-8598.1Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKH
        MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKH

Query:  GKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD
        GKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  GKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29280.1 unknown protein2.4e-6669.81Show/hide
Query:  DKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMV
        D+E    EGVASIALLPCG++SGHFIQ+P  +CYGLHGTEL CE ECSRGEDYRLIKLTI +YN K+E+TVVVE +GHDAAR + + HAHGWEEDV+ +V
Subjt:  DKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMV

Query:  EKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ
        E+KHGK  + +SFEC+TLK+++AAEDHIRQF+PKL G DAV+N+GPM I GLDF A E+
Subjt:  EKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTGCATTCCCAGGTAAAATAGGAGGAGATAAGGAGAGAATGGCGATGGAAGGAGTTGCTTCTATTGCACTTTTGCCTTGTGGCTCTGTCTCTGGCCACTTCAT
TCAACTTCCTCACTTCGTCTGCTATGGCCTACACGGCACCGAATTGGAATGTGAAAGAGAGTGTAGCAGAGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACT
ACAATAACAAGCAAGAACGAACCGTCGTTGTTGAACGTAGAGGCCATGATGCTGCACGGTTTCACAGCATCGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAAAATG
GTTGAAAAAAAGCATGGAAAGAATGACATAATGATTTCGTTCGAGTGTCAAACGTTGAAGTCTGAGCAAGCGGCTGAGGATCATATCAGACAGTTTATTCCCAAATTAGT
AGGACAAGACGCTGTGGTTAACGTGGGGCCAATGAGCATCAGAGGATTGGATTTTGAAGCAGAGGAGCAACCAGGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCTCGACCTGTTCGGATGATGAGGTAGGCGAAAGTGGTAGAGTGTCCAATATGGTAGGGTTCCCTTCAACATCGTATTGAGTTCATGGATGATCATTGCATTC
CCAGGTAAAATAGGAGGAGATAAGGAGAGAATGGCGATGGAAGGAGTTGCTTCTATTGCACTTTTGCCTTGTGGCTCTGTCTCTGGCCACTTCATTCAACTTCCTCACTT
CGTCTGCTATGGCCTACACGGCACCGAATTGGAATGTGAAAGAGAGTGTAGCAGAGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAG
AACGAACCGTCGTTGTTGAACGTAGAGGCCATGATGCTGCACGGTTTCACAGCATCGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAAAATGGTTGAAAAAAAGCAT
GGAAAGAATGACATAATGATTTCGTTCGAGTGTCAAACGTTGAAGTCTGAGCAAGCGGCTGAGGATCATATCAGACAGTTTATTCCCAAATTAGTAGGACAAGACGCTGT
GGTTAACGTGGGGCCAATGAGCATCAGAGGATTGGATTTTGAAGCAGAGGAGCAACCAGGAGACTGATGCAACGATTCGAAACATTTTGAATAACACTTTTTTCAACTCA
TGGCTTGTAAATCAAGGTCCTTTAACCCAGACTTGGAACAGAATTTTTTTTCTTTAAAGTCGTTTTTCCATCAACAACGTCACTAACTTAATAAAGAAAATGTAGAAAGG
AGTGAGTATAATTATACTCAATATAAGCAATCTACTGTAGACCCTCATTGCATCATTATCCTACTGGGTATCCATAGGCTTTTCTCTAGAGTCTATGAAGTTCGAGCCTT
GTCTCTACGGTTAGTTAAGCATCTGGGGAGACCTCGAAGTTCTTCTGAGAAATTCTCTAGTTTGAATTTGCTCTTAGGGGTTTGTACTAGTTGTCCAACCTTTCTATTCT
TTGACT
Protein sequenceShow/hide protein sequence
MIIAFPGKIGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFHSIVHAHGWEEDVVKM
VEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGD