CuGenDBv2

Gene ID	Carg27402
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Glycine cleavage system H protein
Genome location	Carg_Chr19:5119883..5120723
RNA-Seq Expression	Carg27402
Synteny	Carg27402
Gene Ontology terms	GO:0009249 - protein lipoylation (biological process) GO:0019464 - glycine decarboxylation via glycine cleavage system (biological process) GO:0005739 - mitochondrion (cellular component) GO:0005960 - glycine cleavage complex (cellular component)
InterPro domains	IPR000089 - Biotin/lipoyl attachment IPR002930 - Glycine cleavage system H-protein IPR003016 - 2-oxo acid dehydrogenase, lipoyl-binding site IPR011053 - Single hybrid motif IPR033753 - Glycine cleavage system H-protein/Simiate

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571837.1 Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-22

93.55

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

KAG7011522.1 Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-34

100

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Query:  MPDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIPNSFCQFFGLCI
        MPDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIPNSFCQFFGLCI
Subjt:  MPDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIPNSFCQFFGLCI

XP_004148493.1 glycine cleavage system H protein 3, mitochondrial [Cucumis sativus]

3.6e-21

90.32

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+SPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

XP_022952526.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata]

2.5e-22

93.55

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

XP_038876916.1 glycine cleavage system H protein, mitochondrial [Benincasa hispida]

7.3e-22

91.94

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+SPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI67 Glycine cleavage system H protein

1.8e-21

90.32

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+SPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

A0A1S3CQ17 Glycine cleavage system H protein

3.9e-21

88.71

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK++PGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

A0A6J1GKG7 Glycine cleavage system H protein

1.2e-22

93.55

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

A0A6J1I8M1 Glycine cleavage system H protein

1.2e-22

93.55

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

A0A6J1JYK8 Glycine cleavage system H protein

2.3e-21

90.32

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

SwissProt top hits

e value

%identity

Alignment

O82179 Glycine cleavage system H protein 2, mitochondrial

4.6e-19

74.19

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L +SPGLV   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

P46485 Glycine cleavage system H protein, mitochondrial

5.1e-18

72.58

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFV+LPE GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L  +PGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

P49359 Glycine cleavage system H protein, mitochondrial

2.7e-19

74.19

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L ++PGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

P49360 Glycine cleavage system H protein, mitochondrial (Fragment)

2.7e-19

74.19

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L ++PGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

Q39732 Glycine cleavage system H protein, mitochondrial

2.7e-19

74.19

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L ++PGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

Arabidopsis top hits

e value

%identity

Alignment

AT1G32470.1 Single hybrid motif superfamily protein

1.8e-18

70.97

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++EVN +L +SPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

AT2G35120.1 Single hybrid motif superfamily protein

3.3e-20

74.19

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L +SPGLV   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

AT2G35370.1 glycine decarboxylase complex H

3.1e-18

72.58

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Query:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP
        DHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L +SPGL+   P
Subjt:  DHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIP

Sequences

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CDS sequence

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ATGCCTGACCATCTAGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAAAGTGTGAAAGCAACAAGTGA
TATCAACTCCCCAATCTCTGGTGAAATTGTTGAAGTTAACCCACAGCTTAAGGATTCTCCTGGTTTGGTAATTCCAATCCCAAACTCTTTTTGCCAATTCTTTGGACTTT
GCATTTGA

mRNA sequence

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Protein sequence

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MPDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLVIPIPNSFCQFFGLCI

Carg27402 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome