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Carg27406 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27406
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontobamovirus multiplication protein 2B
Genome locationCarg_Chr19:5015443..5017199
RNA-Seq ExpressionCarg27406
SyntenyCarg27406
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0042744 - hydrogen peroxide catabolic process (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0004601 - peroxidase activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571829.1 Tobamovirus multiplication protein 2B, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4990.08Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL
        MATASASGRSNRDGTAKAMVADHISQS       L L   SS  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL
Subjt:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL

Query:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        TNMESTQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD

KAG7011518.1 Tobamovirus multiplication protein 2B, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-55100Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSLSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQ
        MATASASGRSNRDGTAKAMVADHISQSLSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQ
Subjt:  MATASASGRSNRDGTAKAMVADHISQSLSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQ

Query:  LKSLSQIQHPKEEIESLHQLKDVD
        LKSLSQIQHPKEEIESLHQLKDVD
Subjt:  LKSLSQIQHPKEEIESLHQLKDVD

XP_022952816.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita moschata]1.9e-5186.62Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
        MATASASGRSNRDGTAK MVADHISQS                  LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES

Query:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD

XP_022972006.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita maxima]2.3e-4984.4Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQSL------------------SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESI
        A+ASASGRSNRDGTAKAMVADHISQS+                  SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESI
Subjt:  ATASASGRSNRDGTAKAMVADHISQSL------------------SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESI

Query:  PHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        PHLQTVVQLLTNME TQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  PHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD

XP_023553906.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita pepo subsp. pepo]1.5e-5186.62Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
        MATASASGRSNRDGTAKAMVADHISQS                  LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES

Query:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD

TrEMBL top hitse value%identityAlignment
A0A1S3CRH1 tobamovirus multiplication protein 2B isoform X11.0e-4281.68Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL
        MATAS SGRSNRDGTAKAMVADHISQS       L L   SS  QAQL KLPKNLLAKAST++NT KILEQMPQVVSSLDAYVEKGLESIP LQTVVQLL
Subjt:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL

Query:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        TNMES+QLKSLSQ QHP+EE ESLHQ KDVD
Subjt:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD

A0A6J1GL95 tobamovirus multiplication protein 2B isoform X19.3e-5286.62Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
        MATASASGRSNRDGTAK MVADHISQS                  LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLES

Query:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  IPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD

A0A6J1GLF5 tobamovirus multiplication protein 2B isoform X29.6e-4989.31Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL
        MATASASGRSNRDGTAK MVADHISQS       L L   SS  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL
Subjt:  MATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLL

Query:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        TNMESTQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  TNMESTQLKSLSQIQHPKEEIESLHQLKDVD

A0A6J1I3H0 tobamovirus multiplication protein 2B isoform X25.3e-4787.69Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLT
        A+ASASGRSNRDGTAKAMVADHISQS       L L   SS  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESIPHLQTVVQLLT
Subjt:  ATASASGRSNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLT

Query:  NMESTQLKSLSQIQHPKEEIESLHQLKDVD
        NME TQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  NMESTQLKSLSQIQHPKEEIESLHQLKDVD

A0A6J1I4S0 tobamovirus multiplication protein 2B isoform X11.1e-4984.4Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQSL------------------SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESI
        A+ASASGRSNRDGTAKAMVADHISQS+                  SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESI
Subjt:  ATASASGRSNRDGTAKAMVADHISQSL------------------SLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESI

Query:  PHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD
        PHLQTVVQLLTNME TQLKSLSQIQHPKEEIESLHQLKDVD
Subjt:  PHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESLHQLKDVD

SwissProt top hitse value%identityAlignment
Q8H960 Tobamovirus multiplication protein 2B9.6e-2260.87Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ
        MATAS + R  S  D TAKA+VAD ISQ+       L L   SS  QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV Q
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ

Query:  LLTNMESTQLKSLSQ
        LL NMESTQL++L Q
Subjt:  LLTNMESTQLKSLSQ

Arabidopsis top hitse value%identityAlignment
AT1G32370.1 tobamovirus multiplication 2B6.8e-2360.87Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ
        MATAS + R  S  D TAKA+VAD ISQ+       L L   SS  QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV Q
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ

Query:  LLTNMESTQLKSLSQ
        LL NMESTQL++L Q
Subjt:  LLTNMESTQLKSLSQ

AT1G32370.2 tobamovirus multiplication 2B6.8e-2360.87Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ
        MATAS + R  S  D TAKA+VAD ISQ+       L L   SS  QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV Q
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ

Query:  LLTNMESTQLKSLSQ
        LL NMESTQL++L Q
Subjt:  LLTNMESTQLKSLSQ

AT1G32370.3 tobamovirus multiplication 2B6.8e-2360.87Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ
        MATAS + R  S  D TAKA+VAD ISQ+       L L   SS  QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV Q
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ

Query:  LLTNMESTQLKSLSQ
        LL NMESTQL++L Q
Subjt:  LLTNMESTQLKSLSQ

AT1G32370.4 tobamovirus multiplication 2B6.8e-2360.87Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ
        MATAS + R  S  D TAKA+VAD ISQ+       L L   SS  QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV Q
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS-------LSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQ

Query:  LLTNMESTQLKSLSQ
        LL NMESTQL++L Q
Subjt:  LLTNMESTQLKSLSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGAGACGGTACGGCCAAAGCCATGGTGGCCGACCACATTTCTCAGTCATTGAGTTTGTCATATAGTTCATCTTGCCT
GCAGGCTCAGTTAGCAAAATTGCCAAAGAACCTTTTGGCGAAAGCATCTACTATAAAAAATACTGAGAAAATCTTAGAGCAGATGCCGCAAGTGGTTTCATCATTAGATG
CATATGTTGAGAAGGGACTAGAAAGCATTCCTCATTTGCAGACTGTTGTGCAATTACTTACAAACATGGAAAGCACCCAACTAAAATCTCTCTCCCAAATCCAACATCCT
AAAGAGGAAATCGAGTCTCTTCATCAACTGAAAGATGTGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGAGACGGTACGGCCAAAGCCATGGTGGCCGACCACATTTCTCAGTCATTGAGTTTGTCATATAGTTCATCTTGCCT
GCAGGCTCAGTTAGCAAAATTGCCAAAGAACCTTTTGGCGAAAGCATCTACTATAAAAAATACTGAGAAAATCTTAGAGCAGATGCCGCAAGTGGTTTCATCATTAGATG
CATATGTTGAGAAGGGACTAGAAAGCATTCCTCATTTGCAGACTGTTGTGCAATTACTTACAAACATGGAAAGCACCCAACTAAAATCTCTCTCCCAAATCCAACATCCT
AAAGAGGAAATCGAGTCTCTTCATCAACTGAAAGATGTGGACTAACAGT
Protein sequenceShow/hide protein sequence
MATASASGRSNRDGTAKAMVADHISQSLSLSYSSSCLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHP
KEEIESLHQLKDVD