; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27422 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27422
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosome biogenesis protein BRX1-like
Genome locationCarg_Chr10:10167727..10174222
RNA-Seq ExpressionCarg27422
SyntenyCarg27422
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR026532 - Ribosome biogenesis protein BRX1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590497.1 Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.4e-13187.78Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

KAG7024031.1 Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-161100Show/hide
Query:  MLFFVEIKRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME
        MLFFVEIKRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME
Subjt:  MLFFVEIKRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME

Query:  ELKLTGNHLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLI
        ELKLTGNHLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLI
Subjt:  ELKLTGNHLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLI

Query:  EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

XP_022961481.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata]7.1e-13187.78Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K         H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

XP_022968762.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita maxima]4.6e-13087.69Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW

XP_023515692.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo]5.4e-13187.78Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

TrEMBL top hitse value%identityAlignment
A0A1S3BQS3 ribosome biogenesis protein BRX1-like2.9e-13087.04Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

A0A5D3CG95 Ribosome biogenesis protein BRX1-like2.9e-13087.04Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

A0A6J1EW75 ribosome biogenesis protein BRX1 homolog 1-like2.7e-12885.93Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLN+VSLLPHCKKDNKVESRS+KGATLNELVELKGCSS LFFECRKHKDLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + L     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLE DEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

A0A6J1HE68 ribosome biogenesis protein BRX1 homolog 1-like3.4e-13187.78Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K         H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

A0A6J1HZ18 ribosome biogenesis protein BRX1 homolog 1-like2.2e-13087.69Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + +     ++ K       + H   LK    QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW
        LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMW

SwissProt top hitse value%identityAlignment
Q3SZZ0 Ribosome biogenesis protein BRX1 homolog1.2e-5144.07Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K + L    R INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
         LKG + L      + +L        H   LK    QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E+GPRF 
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--ELSNPLEPDEFADMW
        LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+   E    L  D  AD++
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--ELSNPLEPDEFADMW

Q4QQT6 Ribosome biogenesis protein BRX1 homolog6.8e-5244.44Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K + L    R INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
         LKG + L      +  L        H   LK F  QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E+GPRF 
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKK--VKAKTRRKMHELSNPLEPDEFADMW
        LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K  VK   + +  E    L  D  AD++
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKK--VKAKTRRKMHELSNPLEPDEFADMW

Q9C928 Ribosome biogenesis protein BRX1 homolog 22.1e-11775.56Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRI+FRYR LMLN+VSLLPHCKKD+KVE++S+KGATLNEL+ELK  +S LFFECRKHKDLY+WM K P+GPSVKFLV AVH MEE+KLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + L     ++ K       + H   LK    Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KMHELSNPLEPDEFADMWK+
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

Q9DCA5 Ribosome biogenesis protein BRX1 homolog8.9e-5244.07Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K + L    R INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
         LKG + L      +  L        H   LK F  QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E+GPRF 
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--ELSNPLEPDEFADMW
        LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY ++ + K  +K+   E    L  D  AD++
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--ELSNPLEPDEFADMW

Q9LE16 Ribosome biogenesis protein BRX1 homolog 11.1e-11877.04Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKD+KVE++S++GATLNEL+ELKG SS LFFECRKHKDLY+WM K P GPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + L     +++        + H   LK    QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHELSNPLEPDEF DMW +
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

Arabidopsis top hitse value%identityAlignment
AT1G52930.1 Ribosomal RNA processing Brix domain protein1.5e-11875.56Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRI+FRYR LMLN+VSLLPHCKKD+KVE++S+KGATLNEL+ELK  +S LFFECRKHKDLY+WM K P+GPSVKFLV AVH MEE+KLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + L     ++ K       + H   LK    Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KMHELSNPLEPDEFADMWK+
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

AT3G15460.1 Ribosomal RNA processing Brix domain protein7.9e-12077.04Show/hide
Query:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN
        K K L  C RRINFRYRHLMLNMVSLLPHCKKD+KVE++S++GATLNEL+ELKG SS LFFECRKHKDLY+WM K P GPSVKFLVNAVHTMEELKLTGN
Subjt:  KRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGN

Query:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC
        HLKG + L     +++        + H   LK    QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTLIEVGPRFC
Subjt:  HLKGVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFC

Query:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
        LNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHELSNPLEPDEF DMW +
Subjt:  LNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTTTTCGTCGAAATAAAGAGAAAGTTCTTGTCACTATGTTTCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTG
TAAGAAGGATAACAAGGTGGAGTCAAGGTCCACCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGTAGAAAACATA
AAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGACCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAACTGAAGCTTACAGGGAACCATCTGAAA
GGAGTAAAAAACTTGAAACATGAAAAGGTGGATTATAAGAAACTTCTCCAATTTTCTCATCTTAATTGTCATAATTTTAGCTTAAAATGTTTTCCCCCCCAGATTTTTGG
AACCCCGAAGGAACATCGACATTCGAAGCCATACCATGATCATGTATTTGTTTTCTCCATTGTAGATGACCACATATGGTTCCGAAATTACCAGATAGCTGTTCCACATA
ATGAATCAGATAAAGTAGCTCGTGGAGGACTAGATAAAATGACTCTCATTGAGGTCGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGT
CCAACCCTATACGAGAATCCGCTCTACGTATCGCCAAACCAGATTCGAGCGTTGGAGAAGAAGCAGAAGGCTGGAAAATACTCGAAGAAAGTTAAAGCGAAAACGAGGAG
GAAGATGCACGAGTTATCAAATCCATTGGAACCGGACGAGTTTGCTGATATGTGGAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
GACGTCGTCTCAGCGGTTTGCCGCCGCACGCTGCACTTCTCAACTGTTGCAGTCTCAGTATTCCCGTCGAACTCGCCGTTGCTCCTTCCCTTCTCATACTCTCTCGCCTC
TCCGAGCAGTCAGAAACAGTGGTTTCAGCCACTAACCCTCGCGTGGGGGTGACATTCTCAAATGGTGAAAGAAGAGGAAGCATAGCGAGACTTTGTCGGCGGTATCGGTT
AAGAAGGATGATGTTGCCCCTGAGAGATCCAAGCGGACACTCACGGGTTGGAAAGACAAGGAAGTCATAACAAAGAGTGAATTCGGGATTCTGATCATGCTGTTTTTCGT
CGAAATAAAGAGAAAGTTCTTGTCACTATGTTTCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACA
AGGTGGAGTCAAGGTCCACCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGTAGAAAACATAAAGATCTCTATTTA
TGGATGGCAAAGTGCCCTAGTGGACCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAACTGAAGCTTACAGGGAACCATCTGAAAGGAGTAAAAAACTT
GAAACATGAAAAGGTGGATTATAAGAAACTTCTCCAATTTTCTCATCTTAATTGTCATAATTTTAGCTTAAAATGTTTTCCCCCCCAGATTTTTGGAACCCCGAAGGAAC
ATCGACATTCGAAGCCATACCATGATCATGTATTTGTTTTCTCCATTGTAGATGACCACATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAA
GTAGCTCGTGGAGGACTAGATAAAATGACTCTCATTGAGGTCGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATACGA
GAATCCGCTCTACGTATCGCCAAACCAGATTCGAGCGTTGGAGAAGAAGCAGAAGGCTGGAAAATACTCGAAGAAAGTTAAAGCGAAAACGAGGAGGAAGATGCACGAGT
TATCAAATCCATTGGAACCGGACGAGTTTGCTGATATGTGGAAGGAATAG
Protein sequenceShow/hide protein sequence
MLFFVEIKRKFLSLCFRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK
GVKNLKHEKVDYKKLLQFSHLNCHNFSLKCFPPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGG
PTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE