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Carg27423 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27423
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF538
Genome locationCarg_Chr10:10163149..10163637
RNA-Seq ExpressionCarg27423
SyntenyCarg27423
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590497.1 Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.5e-8399.38Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRK+TTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE
        ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKE

XP_016903169.1 PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo]2.6e-7287.73Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLKQ+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV
        ELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEP+K  SE KE  VG V VKE+
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV

XP_022961599.1 uncharacterized protein LOC111462128 [Cucurbita moschata]5.0e-84100Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
        ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV

XP_022968806.1 uncharacterized protein LOC111467934 [Cucurbita maxima]2.1e-8298.15Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQ+KNTTHKFEKIGKLVSYATEVTAVVEKN+IKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
        ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE LKQVSEKEHGVGAVGVKEV
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV

XP_038893609.1 uncharacterized protein LOC120082490 [Benincasa hispida]4.0e-7388.34Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MS   EEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETG+VWLKQ+K+TTHKFEKIGKLVSYATEVTA+VEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV
        ELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEP+K V+E KE GVG V VKEV
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV

TrEMBL top hitse value%identityAlignment
A0A0A0LTC9 Uncharacterized protein4.7e-7287.73Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLKQ+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV
        ELLIWVSLSDIYVDDPPTGKITFQTPAGL+RTFPVSAFQVEEP+K VSE KE  V  V VKE+
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV

A0A1S4E4L7 uncharacterized protein LOC1035022271.2e-7287.73Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLKQ+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV
        ELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEP+K  SE KE  VG V VKE+
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV

A0A5D3E4Q7 Uncharacterized protein1.2e-7287.73Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLKQ+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV
        ELL+WVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEP+K  SE KE  VG V VKE+
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV

A0A6J1HEI9 uncharacterized protein LOC1114621282.4e-84100Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
        ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV

A0A6J1HVW7 uncharacterized protein LOC1114679341.0e-8298.15Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQ+KNTTHKFEKIGKLVSYATEVTAVVEKN+IKKLTGVKTK
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
        ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE LKQVSEKEHGVGAVGVKEV
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09310.1 Protein of unknown function, DUF5382.9e-5062.87Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        M + TEE++AK AE+Y GDEIC+EK+K  LKEI +PNGLLPLKDIEE G  RE+G VWLKQ+K+ THKF +I KLVSY TEVTA+VE  KIKKLTGVK K
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQV------EEPLKQVSEKEHGVGAVGVKE
        ELLIWV++++IY ++PPT KITF+TP  L RTFPV+AF V      EEP K+   KE    A   KE
Subjt:  ELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQV------EEPLKQVSEKEHGVGAVGVKE

AT1G56580.1 Protein of unknown function, DUF5381.3e-5064.56Show/hide
Query:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK
        M + T+E++A+ AE Y GDEIC+EK+KE LKE+ +PNGLLPLKDIEE G  RETG VWLKQ+K+ THKFE IGKLVSYATEV A VE  KIKKLTGVK K
Subjt:  MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTK

Query:  ELLIWVSLSDIYVDDP-PTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV
        ELLIWV+L+++ ++ P  +GKI F+TP GL RTFPVSAF V E  K  +EK +G   V
Subjt:  ELLIWVSLSDIYVDDP-PTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV

AT4G24130.1 Protein of unknown function, DUF5386.2e-3248.48Show/hide
Query:  KGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSD
        +GAE+  G E C ++S ELL+E+G P G++PLK++ ECG VR TGYVW+KQ     H FE     VSY  EVTA V+K  +KK+TGVK+K++ +WV + +
Subjt:  KGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSD

Query:  IYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE
        + +++P + KI F+TP G+ R+FPV+ F  EE
Subjt:  IYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE

AT5G46230.1 Protein of unknown function, DUF5385.0e-3446.1Show/hide
Query:  SVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKE
        S  T+  + +GAE+  G+  C++K+KE+L  + LP GLLPL ++ E G  + TGYVW+K +    H+F+ IG+ VSY +EVTA++E  ++ +LTG+K+KE
Subjt:  SVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKE

Query:  LLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE
        +LIWV++S+I+V+     +ITF  P GL RTFPV+AF+ +E
Subjt:  LLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEE

AT5G49600.1 Protein of unknown function, DUF5383.2e-2844.51Show/hide
Query:  VATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTH----------KFEKIGKLVSYATEVTAVVEKNKIK
        + TE +KAK AEVY GD+ C+EK   LL EIGLPN LL  K+I+ECG V++TG+VWLK ++              +F+ +  +V +  EVTA  E N+IK
Subjt:  VATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTH----------KFEKIGKLVSYATEVTAVVEKNKIK

Query:  KLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLF-RTFPVSAFQ----VEEPLKQVSEKE
        KLTGVK KE ++W+SL +I V +  +G ITF+T  GL  ++ P+S F+     +  LK+  +KE
Subjt:  KLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLF-RTFPVSAFQ----VEEPLKQVSEKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAA
TGGGCTTCTGCCATTGAAGGACATAGAAGAATGTGGGATCGTGAGAGAAACAGGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGA
AGCTGGTGTCGTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGAT
ATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCGGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGT
GAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAA
TGGGCTTCTGCCATTGAAGGACATAGAAGAATGTGGGATCGTGAGAGAAACAGGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGA
AGCTGGTGTCGTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGAT
ATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCGGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGT
GAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA
Protein sequenceShow/hide protein sequence
MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSD
IYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV