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Carg27424 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27424
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIGR domain-containing protein
Genome locationCarg_Chr10:10144574..10150516
RNA-Seq ExpressionCarg27424
SyntenyCarg27424
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590496.1 hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia]1.6e-54100Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA
KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-54100Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA
XP_022961412.1 uncharacterized protein LOC111461991 [Cucurbita moschata]2.0e-5297.22Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRS LQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA
XP_022968823.1 uncharacterized protein LOC111467943 [Cucurbita maxima]4.4e-5297.2Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRSILQPYS PLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALK
        PRSDALK
Subjt:  PRSDALK
XP_023516779.1 uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo]3.0e-5398.15Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRSILQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA
TrEMBL top hitse value%identityAlignment
A0A0A0M1A4 IGR domain-containing protein3.4e-5091.67Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWR I SNHRSILQPYS PLFARFFSKS PY+VKVGIPEFL G+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR D+LKA
Subjt:  PRSDALKA
A0A1S3BPD9 uncharacterized protein LOC1034921082.2e-4989.81Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAW+ I SNHRSILQPYS  LFARFFSKS PY+VKVGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR D+LK+
Subjt:  PRSDALKA
A0A6J1DML5 uncharacterized protein LOC1110218231.2e-5092.59Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQIFSN+RSILQPYS PLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PR+D++KA
Subjt:  PRSDALKA
A0A6J1HA49 uncharacterized protein LOC1114619919.5e-5397.22Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRS LQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALKA
        PRSDALKA
Subjt:  PRSDALKA
A0A6J1HZ75 uncharacterized protein LOC1114679432.1e-5297.2Show/hide
Query:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI SNHRSILQPYS PLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRSDALK
        PRSDALK
Subjt:  PRSDALK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown5.7e-3464.29Show/hide
Query:  MAWRQIFSNHRSIL---QPYSTPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        MAW ++  + R+ L   Q  ST    RF  SK   Y VKVGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  KYRL
Subjt:  MAWRQIFSNHRSIL---QPYSTPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDALKA
        GLW+PR+DA+KA
Subjt:  GLWRPRSDALKA
AT5G26800.1 FUNCTIONS IN: molecular_function unknown8.5e-3868.75Show/hide
Query:  MAWRQIFSNHRSIL--QPYSTPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        MAW ++  + RS+L   P S+ L F RF+SKS  PY VKVGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY+HKYRL
Subjt:  MAWRQIFSNHRSIL--QPYSTPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDALKA
        GLW+PR+DA+KA
Subjt:  GLWRPRSDALKA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGGCAGATTTTCTCCAACCATAGGTCTATACTGCAACCATACTCAACTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATATGTCGTGAAGGTCGG
GATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACGCGCACACTTAAGC
TGAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGA
mRNA sequenceShow/hide mRNA sequence
TTTAACCAAATCTTTGTAACACCGTACCATCTCATCTTTCGTTGTTCTCTTTCATCTCCCATTTTTGCCACTCGCCGGAACGCCTCCACCGCCACGCTGCTTCAGCCTCT
CACTGTCACGCCAACTACTGTCTTCTGCTGCATTCCCTTCAGCTATTGTTCTCTCACCGTCGAGCAAGAAGGATGGCATGGAGGCAGATTTTCTCCAACCATAGGTCTAT
ACTGCAACCATACTCAACTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATATGTCGTGAAGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTG
AGTCACACGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACGCGCACACTTAAGCTGAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTG
ATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGATGGGTTTAGCTATGTTTACGAGGTGAATGGAATTGTTAGCT
GATCCTCGGACCTCAGTTTGTAGAACTTTGAAGGATAGCATTTCATTTTCTAAATCTAAAGCATATCCTTATTTCTGCTGCTTTTGAATTGTTTCTATTCATTTACTAAC
TGTATACGCATTCAGTTCATTTAAGATCATGCATGAATCTTAAATCTAGTAAGTGAACCGAGAGTTCAAATTTATATCATCTGCATGACCGGAACAAACGAATTCTGGTA
AGTTGGCGTCTGTTCTCTCCAGAACTTTTGTCTTATAGATTCAGTCAAAATTGTAAAATTAAGTCATCCTATGAGAAGCAAGGGGCCTATGATAGATAGAGATTATGAGC
CCAATCAAAAGCTCTTCATTTTGGGTTCGATTCTGAACTTTTGTCGCTATTTGAAACAGTATCCCCCCCACCCCCCATCC
Protein sequenceShow/hide protein sequence
MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA