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Carg27450 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27450
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c oxidase subunit 1
Genome locationCarg_Chr09:6929878..6935318
RNA-Seq ExpressionCarg27450
SyntenyCarg27450
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004129 - cytochrome-c oxidase activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000883 - Cytochrome c oxidase subunit I
IPR036927 - Cytochrome c oxidase-like, subunit I superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AMC32794.1 cytochrome c oxidase subunit 1 [Euphorbia marginata]7.3e-1558.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG+GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

CAA11328.1 coxI, partial [Nerium oleander]2.8e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

CAA11331.1 cytochrome c oxidase subunit I, partial [Catharanthus roseus]2.8e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

GEV64605.1 fimbrin-2 [Tanacetum cinerariifolium]2.1e-1446.28Show/hide
Query:  CCPVKAKVAGEFMTSSRAWGTFENYSWFIG-CLKMRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSS
        CC     V    + +S A        + IG  + M GG GNWSVP +IGAP++ FPR                 S AL+EVGS  GWT+YPPLSGITS S
Subjt:  CCPVKAKVAGEFMTSSRAWGTFENYSWFIG-CLKMRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSS

Query:  GGAVDSAITS---VGISKIPR
        GGAVDSAI+S    G+S +PR
Subjt:  GGAVDSAITS---VGISKIPR

KAG7025077.1 cytochrome c oxidase subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-101100Show/hide
Query:  MVSEPDIGLCASKEVVPRRGLDTSGVPLSYRNAKIKRVILLEQFYVRDDLHSQKREVNNVTMSQFNWLECCPVKAKVAGEFMTSSRAWGTFENYSWFIGC
        MVSEPDIGLCASKEVVPRRGLDTSGVPLSYRNAKIKRVILLEQFYVRDDLHSQKREVNNVTMSQFNWLECCPVKAKVAGEFMTSSRAWGTFENYSWFIGC
Subjt:  MVSEPDIGLCASKEVVPRRGLDTSGVPLSYRNAKIKRVILLEQFYVRDDLHSQKREVNNVTMSQFNWLECCPVKAKVAGEFMTSSRAWGTFENYSWFIGC

Query:  LKMRGGYGNWSVPTMIGAPNLKFPRSSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKIPRSNLIIVRSQTYKHIQT
        LKMRGGYGNWSVPTMIGAPNLKFPRSSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKIPRSNLIIVRSQTYKHIQT
Subjt:  LKMRGGYGNWSVPTMIGAPNLKFPRSSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKIPRSNLIIVRSQTYKHIQT

TrEMBL top hitse value%identityAlignment
A0A0X8GIH0 Cytochrome c oxidase subunit 13.6e-1558.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG+GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

A0A0X8GIM4 Cytochrome c oxidase subunit 11.3e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

B0FAD0 Cytochrome c oxidase subunit 1 (Fragment)1.3e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

K7YUF6 Cytochrome c oxidase subunit 1 (Fragment)1.3e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

O80001 Cytochrome c oxidase subunit 1 (Fragment)1.3e-1458.54Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

SwissProt top hitse value%identityAlignment
P07506 Cytochrome c oxidase subunit 14.8e-1757.32Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S +
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

P08743 Cytochrome c oxidase subunit 14.8e-1757.32Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S +
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

P12786 Cytochrome c oxidase subunit 14.8e-1757.32Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG GNWSVP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVDSAI+S+ +S +
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

P68539 Cytochrome c oxidase subunit 15.3e-1656.1Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG+GNW VP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVD AI S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

P68540 Cytochrome c oxidase subunit 15.3e-1656.1Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG+GNW VP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVD AI S+ +S I
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI

Arabidopsis top hitse value%identityAlignment
ATMG01360.1 cytochrome oxidase4.9e-1754.88Show/hide
Query:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI
        M GG+GNW VP +IGAP++ FPR                 SSAL+EVGS  GWT+YPPLSGITS SGGAVD AI S+ +S +
Subjt:  MRGGYGNWSVPTMIGAPNLKFPR-----------------SSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAGAGCCAGACATCGGACTTTGTGCCAGCAAGGAGGTTGTTCCCCGAAGAGGGCTAGACACGAGCGGTGTGCCACTCAGTTACAGGAACGCCAAAATTAAGCG
TGTCATTCTTTTGGAGCAATTCTATGTTAGGGATGATCTTCACTCTCAGAAGCGAGAAGTAAATAACGTGACCATGTCGCAGTTCAATTGGCTAGAGTGCTGCCCTGTCA
AGGCAAAAGTTGCAGGTGAGTTCATGACGAGTAGTCGTGCGTGGGGAACGTTCGAGAATTATTCGTGGTTCATCGGATGTCTTAAAATGAGAGGTGGATATGGTAATTGG
TCTGTTCCAACTATGATAGGTGCACCTAACCTGAAATTTCCACGAAGCTCGGCCTTAATAGAAGTGGGTAGCAGCATTGGGTGGACGATCTATCCACCCTTAAGTGGTAT
TACCAGCTCTTCTGGAGGAGCAGTTGATTCAGCAATTACCAGCGTGGGAATATCAAAAATACCCAGAAGCAATCTCATTATCGTGCGAAGTCAAACGTACAAGCACATAC
AAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATCAGAGCCAGACATCGGACTTTGTGCCAGCAAGGAGGTTGTTCCCCGAAGAGGGCTAGACACGAGCGGTGTGCCACTCAGTTACAGGAACGCCAAAATTAAGCG
TGTCATTCTTTTGGAGCAATTCTATGTTAGGGATGATCTTCACTCTCAGAAGCGAGAAGTAAATAACGTGACCATGTCGCAGTTCAATTGGCTAGAGTGCTGCCCTGTCA
AGGCAAAAGTTGCAGGTGAGTTCATGACGAGTAGTCGTGCGTGGGGAACGTTCGAGAATTATTCGTGGTTCATCGGATGTCTTAAAATGAGAGGTGGATATGGTAATTGG
TCTGTTCCAACTATGATAGGTGCACCTAACCTGAAATTTCCACGAAGCTCGGCCTTAATAGAAGTGGGTAGCAGCATTGGGTGGACGATCTATCCACCCTTAAGTGGTAT
TACCAGCTCTTCTGGAGGAGCAGTTGATTCAGCAATTACCAGCGTGGGAATATCAAAAATACCCAGAAGCAATCTCATTATCGTGCGAAGTCAAACGTACAAGCACATAC
AAACATAG
Protein sequenceShow/hide protein sequence
MVSEPDIGLCASKEVVPRRGLDTSGVPLSYRNAKIKRVILLEQFYVRDDLHSQKREVNNVTMSQFNWLECCPVKAKVAGEFMTSSRAWGTFENYSWFIGCLKMRGGYGNW
SVPTMIGAPNLKFPRSSALIEVGSSIGWTIYPPLSGITSSSGGAVDSAITSVGISKIPRSNLIIVRSQTYKHIQT