; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27452 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27452
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionlisH domain-containing protein C1711.05 isoform X4
Genome locationCarg_Chr09:11905142..11909504
RNA-Seq ExpressionCarg27452
SyntenyCarg27452
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601476.1 hypothetical protein SDJN03_06709, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2356.59Show/hide
Query:  RAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQE--------------------------------------GSQT
        +++G   P  ASQVYDITHESG NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQ                                       G   
Subjt:  RAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQE--------------------------------------GSQT

Query:  ELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        ELLVFNSPPEVI  +E  EMKSVEYEEEP
Subjt:  ELLVFNSPPEVIKRQEKLEMKSVEYEEEP

KAG7025190.1 hypothetical protein SDJN02_14013, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-293100Show/hide
Query:  MGITLHLALSAIVGEGIYWERNDWRELDKRLTRPGDVFPHWEVSFAWCMHIDVFGKEQPWIVGLCLTFFSGNSFCSSRPLVQDVVHQMIMRPCLMCLFFY
        MGITLHLALSAIVGEGIYWERNDWRELDKRLTRPGDVFPHWEVSFAWCMHIDVFGKEQPWIVGLCLTFFSGNSFCSSRPLVQDVVHQMIMRPCLMCLFFY
Subjt:  MGITLHLALSAIVGEGIYWERNDWRELDKRLTRPGDVFPHWEVSFAWCMHIDVFGKEQPWIVGLCLTFFSGNSFCSSRPLVQDVVHQMIMRPCLMCLFFY

Query:  LRGCGPSPLLFGTLRLVPDVQACLKEYLNDLVELFYGAGSCSSGLYAHQLLIMSITAYIEIRLRTANLLKGFNPESFCLMLLYCFHSVAVAVLISRWASY
        LRGCGPSPLLFGTLRLVPDVQACLKEYLNDLVELFYGAGSCSSGLYAHQLLIMSITAYIEIRLRTANLLKGFNPESFCLMLLYCFHSVAVAVLISRWASY
Subjt:  LRGCGPSPLLFGTLRLVPDVQACLKEYLNDLVELFYGAGSCSSGLYAHQLLIMSITAYIEIRLRTANLLKGFNPESFCLMLLYCFHSVAVAVLISRWASY

Query:  DILDHFGTLGTSALKLPASESRHCDFMVDDILNLATIIAYHGTRFDLLDQAMRDNYKKLRVGERAVLIVLSAISGPPKGAVKGWLAKRSHCSLLNGTLKG
        DILDHFGTLGTSALKLPASESRHCDFMVDDILNLATIIAYHGTRFDLLDQAMRDNYKKLRVGERAVLIVLSAISGPPKGAVKGWLAKRSHCSLLNGTLKG
Subjt:  DILDHFGTLGTSALKLPASESRHCDFMVDDILNLATIIAYHGTRFDLLDQAMRDNYKKLRVGERAVLIVLSAISGPPKGAVKGWLAKRSHCSLLNGTLKG

Query:  TARLSERLPLFYILSSPSLKPYDLLGLRLFLFLDLFFANQPIGAKPYSPSNLLAIELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRIST
        TARLSERLPLFYILSSPSLKPYDLLGLRLFLFLDLFFANQPIGAKPYSPSNLLAIELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRIST
Subjt:  TARLSERLPLFYILSSPSLKPYDLLGLRLFLFLDLFFANQPIGAKPYSPSNLLAIELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRIST

Query:  FPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQEGSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        FPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQEGSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP
Subjt:  FPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQEGSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP

KAG7032255.1 hypothetical protein SDJN02_06299, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2346.07Show/hide
Query:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI
        I L       + +  K+D  DV SI   K                    +++G   P  ASQVYDITHESG NAMSPTQSPPLQTMDRVGGYESYDPSRI
Subjt:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI

Query:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        PSAVFQ                                       G   ELLVFNSPPEVI  +E  EMKSVEYEEEP
Subjt:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP

XP_022956763.1 uncharacterized protein LOC111458373 [Cucurbita moschata]1.4e-2346.07Show/hide
Query:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI
        I L       + +  K+D  DV SI   K                    +++G   P  ASQVYDITHESG NAMSPTQSPPLQTMDRVGGYESYDPSRI
Subjt:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI

Query:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        PSAVFQ                                       G   ELLVFNSPPEVI  +E  EMKSVEYEEEP
Subjt:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP

XP_023530940.1 uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo]1.5e-1939.6Show/hide
Query:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI
        I L       + +  K+D  DV SI   K                    +++G   P  ASQVYDITHESG NAMSPTQSPPLQTMDRVGGYESYDPSRI
Subjt:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI

Query:  PSAVFQEGSQT--------------------------------------------------------------ELLVFNSPPEVIKRQEKLEMKSVEYEE
        PSAVFQ    +                                                              ELLVFNSPP VI  +E  EMKSVEYEE
Subjt:  PSAVFQEGSQT--------------------------------------------------------------ELLVFNSPPEVIKRQEKLEMKSVEYEE

Query:  EP
        EP
Subjt:  EP

TrEMBL top hitse value%identityAlignment
A0A1S4DW26 uncharacterized protein LOC103489558 isoform X12.9e-1139.46Show/hide
Query:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------
        S+   +++G   P   SQV  +THESG N +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQ  S                                  
Subjt:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------

Query:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP
                          E  VF+ PP VI  +E  EMKS EYEE P
Subjt:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP

A0A1S4DW31 uncharacterized protein LOC103489558 isoform X52.9e-1139.46Show/hide
Query:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------
        S+   +++G   P   SQV  +THESG N +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQ  S                                  
Subjt:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------

Query:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP
                          E  VF+ PP VI  +E  EMKS EYEE P
Subjt:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP

A0A5A7STD6 Uncharacterized protein2.9e-1139.46Show/hide
Query:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------
        S+   +++G   P   SQV  +THESG N +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQ  S                                  
Subjt:  STFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQEGSQT--------------------------------

Query:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP
                          E  VF+ PP VI  +E  EMKS EYEE P
Subjt:  ------------------ELLVFNSPPEVIKRQEKLEMKSVEYEEEP

A0A6J1GYP0 uncharacterized protein LOC1114583736.6e-2446.07Show/hide
Query:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI
        I L       + +  K+D  DV SI   K                    +++G   P  ASQVYDITHESG NAMSPTQSPPLQTMDRVGGYESYDPSRI
Subjt:  IELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRI

Query:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        PSAVFQ                                       G   ELLVFNSPPEVI  +E  EMKSVEYEEEP
Subjt:  PSAVFQE--------------------------------------GSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP

A0A6J1IL15 uncharacterized protein LOC1114784064.9e-1951.94Show/hide
Query:  RAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQE--------------------------------------GSQT
        +++G   P  ASQV DITHESG N MSPTQSPPLQTMDRVGGYE YDP RIPSAVFQ                                       G   
Subjt:  RAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQE--------------------------------------GSQT

Query:  ELLVFNSPPEVIKRQEKLEMKSVEYEEEP
        ELLVFNS P VI  +E  EMKSVEYEEEP
Subjt:  ELLVFNSPPEVIKRQEKLEMKSVEYEEEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATAACGCTGCATTTAGCTTTGTCAGCAATAGTGGGTGAGGGTATCTACTGGGAGAGGAACGACTGGAGAGAGCTTGATAAAAGATTAACAAGACCGGGAGATGT
TTTTCCGCACTGGGAAGTTAGCTTCGCTTGGTGTATGCATATAGACGTGTTTGGTAAGGAGCAGCCCTGGATCGTGGGACTGTGCTTAACTTTCTTTTCTGGTAATTCAT
TCTGCTCGTCTCGCCCATTAGTTCAGGATGTGGTCCACCAGATGATAATGCGTCCATGTCTAATGTGTCTTTTCTTCTACCTCCGTGGTTGCGGTCCGTCGCCCTTACTT
TTTGGCACTCTCCGATTGGTGCCAGACGTACAAGCTTGTCTTAAGGAATATCTAAATGACCTGGTTGAATTGTTCTATGGAGCCGGCTCATGCAGCTCTGGATTATATGC
ACATCAGCTTCTGATCATGTCGATCACTGCGTACATCGAAATCAGGCTCAGGACTGCCAACCTTTTGAAAGGATTTAATCCTGAGAGCTTCTGTCTCATGTTGCTTTATT
GTTTTCATTCAGTGGCTGTTGCTGTCCTCATTTCGCGGTGGGCATCTTATGATATTTTAGATCATTTTGGAACACTGGGAACATCTGCGCTGAAGTTGCCAGCTTCTGAA
AGTCGACACTGCGACTTCATGGTGGATGATATCTTGAATTTAGCTACAATCATTGCGTATCACGGCACTAGGTTCGACCTACTAGATCAAGCGATGCGGGACAATTATAA
GAAGCTTAGAGTGGGGGAAAGGGCCGTACTAATCGTACTGTCAGCCATTAGTGGGCCACCGAAGGGAGCTGTTAAAGGTTGGCTGGCGAAACGGAGCCATTGTTCGTTAC
TGAATGGGACACTGAAAGGCACCGCGAGACTGTCGGAGCGCCTTCCACTCTTTTATATTCTTTCTTCCCCCTCTCTGAAACCCTATGATCTTTTGGGTTTGCGCCTTTTT
CTTTTTCTCGATTTGTTTTTTGCTAACCAGCCTATTGGCGCAAAGCCATATAGTCCCTCTAATTTACTAGCTATTGAATTGTCTAAAGAGCAAAAAGCCGCATTCATGGT
TCTTATTAAAAACGACCGGGTAGATGTTGACAGTATACCGCTGGGGAAGGAATTAGGCAGTACACATTCTGACAGATACTGCTGGGGAAGGATTTCAACTTTCCCCAACA
GAGCAGCTGGCGTATGGGTCCCACATCCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGACAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATG
GATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAGAAGGAAGTCAGACTGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTAT
CAAGCGTCAAGAGAAACTGGAAATGAAGAGTGTCGAATACGAAGAGGAGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATAACGCTGCATTTAGCTTTGTCAGCAATAGTGGGTGAGGGTATCTACTGGGAGAGGAACGACTGGAGAGAGCTTGATAAAAGATTAACAAGACCGGGAGATGT
TTTTCCGCACTGGGAAGTTAGCTTCGCTTGGTGTATGCATATAGACGTGTTTGGTAAGGAGCAGCCCTGGATCGTGGGACTGTGCTTAACTTTCTTTTCTGGTAATTCAT
TCTGCTCGTCTCGCCCATTAGTTCAGGATGTGGTCCACCAGATGATAATGCGTCCATGTCTAATGTGTCTTTTCTTCTACCTCCGTGGTTGCGGTCCGTCGCCCTTACTT
TTTGGCACTCTCCGATTGGTGCCAGACGTACAAGCTTGTCTTAAGGAATATCTAAATGACCTGGTTGAATTGTTCTATGGAGCCGGCTCATGCAGCTCTGGATTATATGC
ACATCAGCTTCTGATCATGTCGATCACTGCGTACATCGAAATCAGGCTCAGGACTGCCAACCTTTTGAAAGGATTTAATCCTGAGAGCTTCTGTCTCATGTTGCTTTATT
GTTTTCATTCAGTGGCTGTTGCTGTCCTCATTTCGCGGTGGGCATCTTATGATATTTTAGATCATTTTGGAACACTGGGAACATCTGCGCTGAAGTTGCCAGCTTCTGAA
AGTCGACACTGCGACTTCATGGTGGATGATATCTTGAATTTAGCTACAATCATTGCGTATCACGGCACTAGGTTCGACCTACTAGATCAAGCGATGCGGGACAATTATAA
GAAGCTTAGAGTGGGGGAAAGGGCCGTACTAATCGTACTGTCAGCCATTAGTGGGCCACCGAAGGGAGCTGTTAAAGGTTGGCTGGCGAAACGGAGCCATTGTTCGTTAC
TGAATGGGACACTGAAAGGCACCGCGAGACTGTCGGAGCGCCTTCCACTCTTTTATATTCTTTCTTCCCCCTCTCTGAAACCCTATGATCTTTTGGGTTTGCGCCTTTTT
CTTTTTCTCGATTTGTTTTTTGCTAACCAGCCTATTGGCGCAAAGCCATATAGTCCCTCTAATTTACTAGCTATTGAATTGTCTAAAGAGCAAAAAGCCGCATTCATGGT
TCTTATTAAAAACGACCGGGTAGATGTTGACAGTATACCGCTGGGGAAGGAATTAGGCAGTACACATTCTGACAGATACTGCTGGGGAAGGATTTCAACTTTCCCCAACA
GAGCAGCTGGCGTATGGGTCCCACATCCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGACAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATG
GATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAGAAGGAAGTCAGACTGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTAT
CAAGCGTCAAGAGAAACTGGAAATGAAGAGTGTCGAATACGAAGAGGAGCCCTAA
Protein sequenceShow/hide protein sequence
MGITLHLALSAIVGEGIYWERNDWRELDKRLTRPGDVFPHWEVSFAWCMHIDVFGKEQPWIVGLCLTFFSGNSFCSSRPLVQDVVHQMIMRPCLMCLFFYLRGCGPSPLL
FGTLRLVPDVQACLKEYLNDLVELFYGAGSCSSGLYAHQLLIMSITAYIEIRLRTANLLKGFNPESFCLMLLYCFHSVAVAVLISRWASYDILDHFGTLGTSALKLPASE
SRHCDFMVDDILNLATIIAYHGTRFDLLDQAMRDNYKKLRVGERAVLIVLSAISGPPKGAVKGWLAKRSHCSLLNGTLKGTARLSERLPLFYILSSPSLKPYDLLGLRLF
LFLDLFFANQPIGAKPYSPSNLLAIELSKEQKAAFMVLIKNDRVDVDSIPLGKELGSTHSDRYCWGRISTFPNRAAGVWVPHPASQVYDITHESGDNAMSPTQSPPLQTM
DRVGGYESYDPSRIPSAVFQEGSQTELLVFNSPPEVIKRQEKLEMKSVEYEEEP