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Carg27459 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27459
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPlant protein of unknown function (DUF247)
Genome locationCarg_Chr09:11856362..11856770
RNA-Seq ExpressionCarg27459
SyntenyCarg27459
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025183.1 hypothetical protein SDJN02_14006, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-28100Show/hide
Query:  MASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        MASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
Subjt:  MASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
XP_022925443.1 UPF0481 protein At3g47200-like [Cucurbita moschata]8.6e-2181.67Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKPQ VSFGPYHH + HLLP+EKKK LA+ +F+RRCGLSTED+
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
XP_022925444.1 UPF0481 protein At3g47200-like [Cucurbita moschata]1.6e-1976.67Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKPQL+SFGPYHH + HL+P EK KHLA   F++RCGLS ED+
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
XP_022925445.1 putative UPF0481 protein At3g02645 [Cucurbita moschata]1.5e-2595Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKP+L+SFGPYHHRDAHLLPLEKKKHLAL NFKRRCGLSTEDI
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
XP_023535502.1 UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]1.4e-1876.67Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKPQ+VSFGPYHHR+ HLLP+EK KHL L +F+  C LS ED+
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
TrEMBL top hitse value%identityAlignment
A0A6J1EBQ1 UPF0481 protein At3g47200-like7.3e-1873.33Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIP+HIKKV+P AFKP+ VSFGPYHH + HL P+EK KHLAL  F+RRCGL  EDI
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
A0A6J1EC69 UPF0481 protein At3g47200-like7.8e-2076.67Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKPQL+SFGPYHH + HL+P EK KHLA   F++RCGLS ED+
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
A0A6J1ECA1 UPF0481 protein At3g47200-like5.6e-1875Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIP++I KVNPNAFKPQLVSFGPYHH + HLLP+EK+KHL   +FKR  GL TEDI
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
A0A6J1EF72 UPF0481 protein At3g47200-like4.2e-2181.67Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKPQ VSFGPYHH + HLLP+EKKK LA+ +F+RRCGLSTED+
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
A0A6J1EI01 putative UPF0481 protein At3g026457.3e-2695Show/hide
Query:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        ASIYRIPEHIKKVNPNAFKP+L+SFGPYHHRDAHLLPLEKKKHLAL NFKRRCGLSTEDI
Subjt:  ASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472002.4e-0542.55Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNF
        I+R+PE    +NP A+KP++VS GPYH+ + HL  +++ K   L  F
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNF
Arabidopsis top hitse value%identityAlignment
AT3G47250.1 Plant protein of unknown function (DUF247)4.4e-0744Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRR
        I+RIP+ + +VNP A+KP++VS GPYH+ + HL  +++ K   L  F  R
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRR
AT3G50130.1 Plant protein of unknown function (DUF247)6.8e-0844.44Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALN
        IYR+P+++++ N  ++ PQ VS GP+HH + HLLP+++ K  A+N
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALN
AT3G50140.1 Plant protein of unknown function (DUF247)3.1e-0848Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRR
        IYR+P  +KK + N++ PQ VS GPYHH D HL P++  K  A+N   +R
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRR
AT3G50160.1 Plant protein of unknown function (DUF247)6.8e-0844.44Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALN
        IYR+P ++++ +  ++ PQ+VS GPYHH   HL+P+E+ K  A+N
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALN
AT4G31980.1 unknown protein1.2e-0739.66Show/hide
Query:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI
        IY++P  ++++NP+A+ P+LVSFGP H     L  +E +K+  L +F  R   S ED+
Subjt:  IYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCTATAGAATACCCGAGCATATAAAGAAGGTTAATCCAAACGCATTCAAACCGCAGCTGGTATCGTTCGGGCCATATCACCATAGGGATGCACATTTGTT
GCCATTGGAGAAGAAAAAACATTTAGCACTTAACAACTTTAAAAGGCGCTGCGGATTGTCCACTGAAGACATC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATCTATAGAATACCCGAGCATATAAAGAAGGTTAATCCAAACGCATTCAAACCGCAGCTGGTATCGTTCGGGCCATATCACCATAGGGATGCACATTTGTT
GCCATTGGAGAAGAAAAAACATTTAGCACTTAACAACTTTAAAAGGCGCTGCGGATTGTCCACTGAAGACATC
Protein sequenceShow/hide protein sequence
MASIYRIPEHIKKVNPNAFKPQLVSFGPYHHRDAHLLPLEKKKHLALNNFKRRCGLSTEDI