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Carg27469 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27469
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioneukaryotic translation initiation factor 2 gamma subunit
Genome locationCarg_Chr04:74480..76028
RNA-Seq ExpressionCarg27469
SyntenyCarg27469
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030542.1 hypothetical protein SDJN02_04579, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-76100Show/hide
Query:  MSILVATQGLRAKEFTSTVIAREHPGVCWARNMANCFTTSLTTTICVDIIWVEMKCQVNRNQTLIGITFYRVGEAGGTTTVLRGIRGCFRVTIFLWLPCL
        MSILVATQGLRAKEFTSTVIAREHPGVCWARNMANCFTTSLTTTICVDIIWVEMKCQVNRNQTLIGITFYRVGEAGGTTTVLRGIRGCFRVTIFLWLPCL
Subjt:  MSILVATQGLRAKEFTSTVIAREHPGVCWARNMANCFTTSLTTTICVDIIWVEMKCQVNRNQTLIGITFYRVGEAGGTTTVLRGIRGCFRVTIFLWLPCL

Query:  MEQAIMDGALLLIAANEKAALKPQTSEHLAAVENYGAFNIYNPPE
        MEQAIMDGALLLIAANEKAALKPQTSEHLAAVENYGAFNIYNPPE
Subjt:  MEQAIMDGALLLIAANEKAALKPQTSEHLAAVENYGAFNIYNPPE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit7.5e-0583.33Show/hide
Query:  AIMDGALLLIAANEKAALKPQTSEHLAAVE
        AIMDGALLLIAANE    +PQTSEHLAAVE
Subjt:  AIMDGALLLIAANEKAALKPQTSEHLAAVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTCTGGTGGCCACCCAAGGCCTGAGAGCTAAAGAATTTACGTCGACAGTAATTGCAAGAGAACATCCTGGGGTTTGTTGGGCCAGAAACATGGCCAACTGCTT
CACTACTAGTCTCACCACTACCATTTGCGTCGACATCATTTGGGTTGAAATGAAGTGTCAAGTCAACAGAAACCAAACCTTGATTGGTATTACCTTTTATCGAGTTGGTG
AGGCAGGAGGTACTACTACTGTCCTTCGAGGGATTAGAGGTTGCTTCAGGGTCACGATATTCTTATGGCTACCATGCTTAATGGAGCAGGCCATTATGGATGGAGCATTA
CTTCTGATAGCAGCAAATGAAAAGGCTGCCCTCAAACCTCAAACCTCTGAGCACCTTGCTGCTGTTGAAAATTATGGCGCCTTCAACATATATAATCCTCCAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTCTGGTGGCCACCCAAGGCCTGAGAGCTAAAGAATTTACGTCGACAGTAATTGCAAGAGAACATCCTGGGGTTTGTTGGGCCAGAAACATGGCCAACTGCTT
CACTACTAGTCTCACCACTACCATTTGCGTCGACATCATTTGGGTTGAAATGAAGTGTCAAGTCAACAGAAACCAAACCTTGATTGGTATTACCTTTTATCGAGTTGGTG
AGGCAGGAGGTACTACTACTGTCCTTCGAGGGATTAGAGGTTGCTTCAGGGTCACGATATTCTTATGGCTACCATGCTTAATGGAGCAGGCCATTATGGATGGAGCATTA
CTTCTGATAGCAGCAAATGAAAAGGCTGCCCTCAAACCTCAAACCTCTGAGCACCTTGCTGCTGTTGAAAATTATGGCGCCTTCAACATATATAATCCTCCAGAATAA
Protein sequenceShow/hide protein sequence
MSILVATQGLRAKEFTSTVIAREHPGVCWARNMANCFTTSLTTTICVDIIWVEMKCQVNRNQTLIGITFYRVGEAGGTTTVLRGIRGCFRVTIFLWLPCLMEQAIMDGAL
LLIAANEKAALKPQTSEHLAAVENYGAFNIYNPPE