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Carg27472 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27472
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:69118..70470
RNA-Seq ExpressionCarg27472
SyntenyCarg27472
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030539.1 hypothetical protein SDJN02_04576, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-60100Show/hide
Query:  MSDIKPREILNLEIFTTFTQDRLQLHPPSNRTLFDIDTLEIHFPWIAGIKFVWQQNVSINDRKKQRRNYEQNANILPFGASTRGCELSTCDPLGNKAFST
        MSDIKPREILNLEIFTTFTQDRLQLHPPSNRTLFDIDTLEIHFPWIAGIKFVWQQNVSINDRKKQRRNYEQNANILPFGASTRGCELSTCDPLGNKAFST
Subjt:  MSDIKPREILNLEIFTTFTQDRLQLHPPSNRTLFDIDTLEIHFPWIAGIKFVWQQNVSINDRKKQRRNYEQNANILPFGASTRGCELSTCDPLGNKAFST

Query:  SSIQRLTTFKLTVVASLQ
        SSIQRLTTFKLTVVASLQ
Subjt:  SSIQRLTTFKLTVVASLQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATATCAAGCCAAGAGAGATTCTCAACCTTGAAATATTTACAACATTTACTCAAGATAGGCTCCAACTCCATCCTCCCTCGAATAGAACGCTCTTTGATATCGA
TACACTTGAGATACATTTTCCTTGGATCGCTGGCATCAAATTCGTTTGGCAACAGAATGTTAGCATTAACGATAGAAAGAAGCAAAGAAGGAATTATGAACAGAATGCCA
ACATCTTGCCCTTTGGAGCTTCGACTCGAGGTTGCGAACTTTCAACATGCGATCCTTTAGGGAATAAAGCCTTCAGTACATCATCCATACAACGACTGACCACTTTCAAG
TTGACAGTAGTTGCATCTCTACAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATATCAAGCCAAGAGAGATTCTCAACCTTGAAATATTTACAACATTTACTCAAGATAGGCTCCAACTCCATCCTCCCTCGAATAGAACGCTCTTTGATATCGA
TACACTTGAGATACATTTTCCTTGGATCGCTGGCATCAAATTCGTTTGGCAACAGAATGTTAGCATTAACGATAGAAAGAAGCAAAGAAGGAATTATGAACAGAATGCCA
ACATCTTGCCCTTTGGAGCTTCGACTCGAGGTTGCGAACTTTCAACATGCGATCCTTTAGGGAATAAAGCCTTCAGTACATCATCCATACAACGACTGACCACTTTCAAG
TTGACAGTAGTTGCATCTCTACAA
Protein sequenceShow/hide protein sequence
MSDIKPREILNLEIFTTFTQDRLQLHPPSNRTLFDIDTLEIHFPWIAGIKFVWQQNVSINDRKKQRRNYEQNANILPFGASTRGCELSTCDPLGNKAFSTSSIQRLTTFK
LTVVASLQ