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Carg27473 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27473
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:68453..69970
RNA-Seq ExpressionCarg27473
SyntenyCarg27473
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599861.1 TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0582.35Show/hide
Query:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RRN AKEISLVWRFHEALRDTYNT  V  R+YIS
Subjt:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
KAG7030538.1 hypothetical protein SDJN02_04575, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-79100Show/hide
Query:  MKQRRNPAKEISLVWRFHEALRDTYNTELVPHRNYISLSVSCTCRKASDYGEQWQLEWFEEDTYKLELLFRYCIENVGELKMRRGQEQSVKRLSKSSDPR
        MKQRRNPAKEISLVWRFHEALRDTYNTELVPHRNYISLSVSCTCRKASDYGEQWQLEWFEEDTYKLELLFRYCIENVGELKMRRGQEQSVKRLSKSSDPR
Subjt:  MKQRRNPAKEISLVWRFHEALRDTYNTELVPHRNYISLSVSCTCRKASDYGEQWQLEWFEEDTYKLELLFRYCIENVGELKMRRGQEQSVKRLSKSSDPR

Query:  KMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQDL
        KMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQDL
Subjt:  KMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQDL
KAG7030546.1 TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-0685.29Show/hide
Query:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RRNPAKEISLVWRFHEALRDTYNT  V  R+YIS
Subjt:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
KAG7030546.1 TPR and ankyrin repeat-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-0867.92Show/hide
Query:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
        SDP++   + + I +     RMELEPILS+LLLLLLHDDPEVEVDQRSIDDQD
Subjt:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
XP_022942070.1 uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata]3.9e-0685.29Show/hide
Query:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RRNPAKEISLVWRFHEALRDTYNT  V  R+YIS
Subjt:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
XP_022942070.1 uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata]6.0e-0767.92Show/hide
Query:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
        SDP++   + + I +     RMELEPILSK LLLLLHDDPEVEVDQRSIDDQD
Subjt:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
XP_023517638.1 uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]1.7e-0971.7Show/hide
Query:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
        SDP++   + + I +R    RMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
Subjt:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
XP_023517638.1 uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]3.9e-0685.29Show/hide
Query:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RRNPAKEISLVWRFHEALRDTYNT  V  R+YIS
Subjt:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
XP_023517638.1 uncharacterized protein LOC111781335 [Cucurbita pepo subsp. pepo]2.4e-0867.92Show/hide
Query:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
        SDP++   + + I +     RMELEPILS+LLLLLLHDDPEVEVDQRSIDDQD
Subjt:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
TrEMBL top hitse value%identityAlignment
A0A6J1FVI8 uncharacterized protein LOC111447259 isoform X11.2e-0867.92Show/hide
Query:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
        SDP++   + + I +     RMELEPILS+LLLLLLHDDPEVEVDQRSIDDQD
Subjt:  SDPRKMYLKCIDIKERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQD
A0A6J1FVI8 uncharacterized protein LOC111447259 isoform X11.9e-0685.29Show/hide
Query:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RRNPAKEISLVWRFHEALRDTYNT  V  R+YIS
Subjt:  RRNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
A0A6J1FVI8 uncharacterized protein LOC111447259 isoform X12.3e-0475.76Show/hide
Query:  RNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
        RNPAKE+SLVWRFHEALRDTY+   V  R+YIS
Subjt:  RNPAKEISLVWRFHEALRDTYNTELVPHRNYIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAAGGAGGAACCCCGCAAAAGAGATATCTCTTGTGTGGAGGTTTCATGAAGCTCTGAGGGACACTTACAATACGGAACTGGTTCCACATCGGAATTATATTTC
GCTTTCTGTTTCATGTACCTGTCGAAAGGCTTCTGATTATGGAGAGCAATGGCAACTGGAGTGGTTTGAAGAAGACACATACAAACTTGAACTGCTATTCCGATACTGCA
TTGAGAATGTTGGAGAATTGAAAATGAGGAGGGGCCAAGAGCAATCTGTCAAACGCCTTTCAAAATCAAGCGATCCAAGGAAAATGTATCTCAAGTGTATCGATATCAAA
GAGCGTTCTATTCGAGGGAGGATGGAGTTGGAGCCTATCTTGAGTAAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGATGA
TCAAGATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAAAGGAGGAACCCCGCAAAAGAGATATCTCTTGTGTGGAGGTTTCATGAAGCTCTGAGGGACACTTACAATACGGAACTGGTTCCACATCGGAATTATATTTC
GCTTTCTGTTTCATGTACCTGTCGAAAGGCTTCTGATTATGGAGAGCAATGGCAACTGGAGTGGTTTGAAGAAGACACATACAAACTTGAACTGCTATTCCGATACTGCA
TTGAGAATGTTGGAGAATTGAAAATGAGGAGGGGCCAAGAGCAATCTGTCAAACGCCTTTCAAAATCAAGCGATCCAAGGAAAATGTATCTCAAGTGTATCGATATCAAA
GAGCGTTCTATTCGAGGGAGGATGGAGTTGGAGCCTATCTTGAGTAAACTACTACTACTACTACTACATGATGATCCTGAAGTGGAAGTGGATCAGAGGTCGATTGATGA
TCAAGATTTGTGA
Protein sequenceShow/hide protein sequence
MKQRRNPAKEISLVWRFHEALRDTYNTELVPHRNYISLSVSCTCRKASDYGEQWQLEWFEEDTYKLELLFRYCIENVGELKMRRGQEQSVKRLSKSSDPRKMYLKCIDIK
ERSIRGRMELEPILSKLLLLLLHDDPEVEVDQRSIDDQDL