; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27475 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27475
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1-like
Genome locationCarg_Chr20:4809688..4812146
RNA-Seq ExpressionCarg27475
SyntenyCarg27475
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571186.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]7.2e-12898.46Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        TGAETAGT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

KAG7010993.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-138100Show/hide
Query:  MAVVSLFCLWWLQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDP
        MAVVSLFCLWWLQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDP
Subjt:  MAVVSLFCLWWLQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDP

Query:  PAASAPQATENTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMD
        PAASAPQATENTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMD
Subjt:  PAASAPQATENTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMD

Query:  EKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        EKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  EKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_022943431.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]3.2e-12897.72Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA   GT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_022943432.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]3.0e-12697.34Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA   GT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

XP_022986587.1 binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]8.0e-12797.31Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA EN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        TGAETA TAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein7.6e-9983.67Show/hide
Query:  RTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAAS-APQATENTG
        RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKD KGAETSILLSGATIVDQP+SI SAPDYNLPAV AS P A   +  A +NT 
Subjt:  RTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAAS-APQATENTG

Query:  AETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAV
             T+ T  T GSAMQKAEDVVSSMLAKGF LGKDALN+AKSFDERH+LTSTAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAV
Subjt:  AETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAV

Query:  NNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKH
        +NAGSAIMTNRYV TGASWVSQTFQRVAKAAVDVSQKTKEK+LAE+ QGKH
Subjt:  NNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKH

A0A6J1FRP4 binding partner of ACD11 1-like isoform X11.6e-12897.72Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA   GT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1FT10 binding partner of ACD11 1-like isoform X21.5e-12697.34Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP ATEN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
        TGAETA   GT GTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK
Subjt:  TGAETA---GTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEK

Query:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  TKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1J7Z5 binding partner of ACD11 1-like isoform X13.9e-12797.31Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA EN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        TGAETA TAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

A0A6J1JGG3 binding partner of ACD11 1-like isoform X23.6e-12596.92Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAP A EN
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        TGAETA TAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERH+LT TAS KVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
        AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP
Subjt:  AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP

SwissProt top hitse value%identityAlignment
P87216 Protein vip15.6e-0624.79Show/hide
Query:  VRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATENTGAET
        V VTN+S   TEK + +FFSF G++  +   K  E  Q A + F+ P   +T++LL  A +    I I S                       E+ GA +
Subjt:  VRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATENTGAET

Query:  AGTAGTTGTTGSAMQKAED---VVSSMLAKGFILGKDALNRAKSFDERHRLTST-ASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA
            G  G   +A Q+ +    ++S +L++G+ L    L ++   D+ + ++S    +  ++L     ++E+       V EK  E+D KF +S+K    
Subjt:  AGTAGTTGTTGSAMQKAED---VVSSMLAKGFILGKDALNRAKSFDERHRLTST-ASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA

Query:  VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVD
        +N   S + T  + +   +  +   Q+V  A  D
Subjt:  VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVD

Q9LFD5 Binding partner of ACD11 15.1e-6053.15Show/hide
Query:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN
        Q+R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+ PA          AP A T++
Subjt:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        +GAE            S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.4e-6654.83Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + M TV+V+NVSLGAT+++L+EFFSFSG+I ++E + + E+ ++A+VTFKD +GAET++LLSGATIVD  + +  APDY L       P A ++ +  ++
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
          +  AG         S ++KAEDVVSSMLAKGFILGKDA+ +AKS DE+H+LTSTAS KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  A-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGK
        A       V+NAGSAIM NRYV TGA+WV+  F +VAKAA +V QK KEK+   +++ K
Subjt:  A-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGK

AT5G16840.1 binding partner of acd11 13.6e-6153.15Show/hide
Query:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN
        Q+R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+ PA          AP A T++
Subjt:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        +GAE            S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G16840.2 binding partner of acd11 13.3e-6253.94Show/hide
Query:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN
        Q+R+V+V N+S GATE +++EFFSFSGE+E ++++  NE    A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+ PA          AP A T++
Subjt:  QMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
        +GAE            S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
                V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  -------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G16840.3 binding partner of acd11 11.4e-6052.55Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TE
        + +R+V+V N+S GATE +++EFFSFSGE+E ++++ +      A+VTFK+ +GAET++LLSGA+I DQ + I  AP+Y+ PA          AP A T+
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQA-TE

Query:  NTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK
        ++GAE            S +QKAEDVVSSMLAKGFILGKDA+ +AK+FDE+H  TSTA+  VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK
Subjt:  NTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK

Query:  A-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE
        +        V++AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEK+ AE
Subjt:  A-------AVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6352.71Show/hide
Query:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN
        + M TV+V+NVSL ATE++L+EFFSFSG+I ++E + +N+  ++A+VTFKD +GAET++LL+G+TIVD  +++  +PDY LP      P A ++ ++ + 
Subjt:  LQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATEN

Query:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA
           E+  ++  T    S  +KAEDVVS M++KGF+LGKDA+ +AKS DE+H+LTSTAS +V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+
Subjt:  TGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA

Query:  A-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKM-LAEDQQ
        A       V+NAGSAIM NRYV TGA+WV+  F RV+KAA +V QK KEK+ LAE+++
Subjt:  A-------VNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKM-LAEDQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGTTTCTTTGTTTTGTTTATGGTGGTTGCAGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTT
CTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGG
GAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCACAGGCTACAGAG
AACACAGGCGCTGAAACTGCTGGAACTGCTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTT
GGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGA
AAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATA
ATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGC
TGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTGTTTCTTTGTTTTGTTTATGGTGGTTGCAGATGCGAACGGTGAGAGTTACAAATGTTTCCTTGGGCGCGACGGAGAAAAATTTGAGAGAATTTTTTTCTTT
CTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCAATTTCAAGTTGCATTTGTTACCTTCAAGGATCCGAAAGGGGCAGAGACATCGATTCTACTCTCGG
GAGCTACAATTGTTGATCAACCTATAAGCATTGTTTCTGCACCAGATTATAACCTTCCTGCTGTTGCTGCCAGTGACCCTCCAGCAGCGTCCGCTCCACAGGCTACAGAG
AACACAGGCGCTGAAACTGCTGGAACTGCTGGAACTACTGGAACTACTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTTAGCAGCATGCTGGCCAAAGGGTTCATTTT
GGGCAAAGATGCGCTCAATAGGGCGAAGTCTTTCGATGAGAGGCACCGGTTGACTTCGACAGCCTCATTGAAAGTCGCTTCTCTGGACCAAAAGATCGGCCTTAGCGAGA
AAATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCCGAGAAAACCAAGGCGGCAGTGAACAATGCAGGATCAGCCATA
ATGACTAACCGCTATGTCTCGACCGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCGAAAGCAGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGATGTTAGC
TGAGGATCAACAAGGGAAACATGGGACTCCAAATGTGAAGCCGTGAGCATCCCAATGTTTGGCCAAAAACAATGTGAGGACCAATTCTTAGCTTGCTCTACTTTCATCTC
AGTTTAGTATTAGGGAGTGCGTACACACAAATAAGCTTACATTACATGCTTATGTTGTAATTCAACCATATGAAAACCATTTATGCTATGTGATAAAGAATCCATGAATG
AAAAAAAAAGAGCTATTT
Protein sequenceShow/hide protein sequence
MAVVSLFCLWWLQMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLSGATIVDQPISIVSAPDYNLPAVAASDPPAASAPQATE
NTGAETAGTAGTTGTTGSAMQKAEDVVSSMLAKGFILGKDALNRAKSFDERHRLTSTASLKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVNNAGSAI
MTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKMLAEDQQGKHGTPNVKP