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Carg27511 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27511
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase subunit 4L
Genome locationCarg_Chr10:10508369..10509037
RNA-Seq ExpressionCarg27511
SyntenyCarg27511
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7039603.1 unnamed protein product [Microthlaspi erraticum]8.2e-0554.41Show/hide
Query:  GDSEFGGLTSSTRTSRRDGRTQD--------------AAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        G S   G  +  R+S   GRT D              AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  GDSEFGGLTSSTRTSRRDGRTQD--------------AAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
GEW29635.1 NADH dehydrogenase subunit 4L, mitochondrial [Tanacetum cinerariifolium]1.1e-0485.29Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AAKS IGLAIFV+TF+VRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
KAF4392715.1 hypothetical protein G4B88_029454 [Cannabis sativa]4.8e-0588.24Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AAKS IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
KAG7024042.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-30100Show/hide
Query:  MSKVVGSGRTGISGSSDIVATMGDSEFGGLTSSTRTSRRDGRTQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        MSKVVGSGRTGISGSSDIVATMGDSEFGGLTSSTRTSRRDGRTQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
Subjt:  MSKVVGSGRTGISGSSDIVATMGDSEFGGLTSSTRTSRRDGRTQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
YP_003587357.1 NADH dehydrogenase subunit 4L [Cucurbita pepo]4.8e-0588.24Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFVMTFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
TrEMBL top hitse value%identityAlignment
A0A6D2JIP2 Uncharacterized protein4.0e-0554.41Show/hide
Query:  GDSEFGGLTSSTRTSRRDGRTQD--------------AAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        G S   G  +  R+S   GRT D              AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  GDSEFGGLTSSTRTSRRDGRTQD--------------AAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
A0A7J6HC95 Uncharacterized protein2.3e-0588.24Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AAKS IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
D5I3E3 NADH dehydrogenase subunit 4L2.3e-0588.24Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFVMTFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
E9KZN8 NADH dehydrogenase subunit 4L6.8e-0585.29Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
S4SJ59 NADH dehydrogenase subunit 4L6.8e-0585.29Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
SwissProt top hitse value%identityAlignment
P26851 NADH-ubiquinone oxidoreductase chain 4L2.9e-0570.59Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAI V+TFR+RGTIAVEFIN ++G
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
Q04614 NADH-ubiquinone oxidoreductase chain 4L1.8e-0785.29Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
Q37627 NADH-ubiquinone oxidoreductase chain 4L9.4e-0461.76Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLA+ V+ +R+RGTIAVEFIN ++G
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
Arabidopsis top hitse value%identityAlignment
ATMG00650.1 NADH dehydrogenase subunit 4L1.3e-0885.29Show/hide
Query:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG
        T  AA+S IGLAIFV+TFRVRGTIAVEFINSIQG
Subjt:  TQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAGTGGTTGGTTCAGGCAGAACCGGGATTTCGGGTTCATCTGACATAGTAGCTACAATGGGAGATTCAGAATTCGGGGGTCTAACTTCTTCTACACGAACCAG
TCGGCGAGATGGGCGGACCCAGGACGCTGCGAAATCTACTATTGGGTTAGCCATTTTTGTTATGACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCA
TTCAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAGTGGTTGGTTCAGGCAGAACCGGGATTTCGGGTTCATCTGACATAGTAGCTACAATGGGAGATTCAGAATTCGGGGGTCTAACTTCTTCTACACGAACCAG
TCGGCGAGATGGGCGGACCCAGGACGCTGCGAAATCTACTATTGGGTTAGCCATTTTTGTTATGACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCA
TTCAAGGTTAA
Protein sequenceShow/hide protein sequence
MSKVVGSGRTGISGSSDIVATMGDSEFGGLTSSTRTSRRDGRTQDAAKSTIGLAIFVMTFRVRGTIAVEFINSIQG