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Carg27519 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27519
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMethionine aminopeptidase
Genome locationCarg_Chr20:11620137..11627919
RNA-Seq ExpressionCarg27519
SyntenyCarg27519
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0070084 - protein initiator methionine removal (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0070006 - metalloaminopeptidase activity (molecular function)
InterPro domainsIPR000994 - Peptidase M24
IPR002467 - Peptidase M24A, methionine aminopeptidase, subfamily 1
IPR036005 - Creatinase/aminopeptidase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011197.1 Methionine aminopeptidase 1D, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-77100Show/hide
Query:  MTLLSLYVEWNTLPALIGVLGVGSLYYRNMSLLGGSGDSRKKKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPM
        MTLLSLYVEWNTLPALIGVLGVGSLYYRNMSLLGGSGDSRKKKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPM
Subjt:  MTLLSLYVEWNTLPALIGVLGVGSLYYRNMSLLGGSGDSRKKKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPM

Query:  LTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQC
        LTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQC
Subjt:  LTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQC

XP_022149493.1 methionine aminopeptidase 1D, chloroplastic/mitochondrial [Momordica charantia]7.4e-4790.38Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADK+R+GVVRQFVGHGVGRVFHADPVILHFRNNDGGRMV NQTFTIEPMLT+GSINPVMWDDNWTVVTEDGSLSAQFEHTILIT+DGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

XP_022928055.1 methionine aminopeptidase 1D, chloroplastic/mitochondrial [Cucurbita moschata]1.2e-4995.19Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

XP_022971681.1 methionine aminopeptidase 1D, chloroplastic/mitochondrial [Cucurbita maxima]1.2e-4995.19Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

XP_023512998.1 methionine aminopeptidase 1D, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]1.2e-4995.19Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

TrEMBL top hitse value%identityAlignment
A0A1S3C6E6 Methionine aminopeptidase1.4e-4689.42Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHR+GVVRQFVGHGVGRVFHADPVILHFRNNDGGRMV NQTFTIEPMLT+GS NPVMWDDNWTVVTEDGSLSAQFEHTILIT+DGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LT+C
Subjt:  LTQC

A0A6J1D6Y1 Methionine aminopeptidase3.6e-4790.38Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADK+R+GVVRQFVGHGVGRVFHADPVILHFRNNDGGRMV NQTFTIEPMLT+GSINPVMWDDNWTVVTEDGSLSAQFEHTILIT+DGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

A0A6J1EQK8 Methionine aminopeptidase5.9e-5095.19Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

A0A6J1I3Y0 Methionine aminopeptidase5.9e-5095.19Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

D7SVZ1 Methionine aminopeptidase5.2e-4686.54Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     DHADKHR+GVVR FVGHGVGRVFHADPVILH+RNNDGG MV NQTFTIEPMLT+GSINP+MWDDNWTVVTEDGSLSAQFEHTILIT++GAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LTQC
Subjt:  LTQC

SwissProt top hitse value%identityAlignment
P53579 Methionine aminopeptidase A2.3e-2252.13Show/hide
Query:  HADKHRFGVVRQFVGHGVGRVFHADPVILHF-RNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILT
        HA+   F VVR FVGHG+ ++FH  P I H+ +   G R+     FTIEPM+  G+   V+ DD WT +T+DG LSAQFEHTI +T+DG EILT
Subjt:  HADKHRFGVVRQFVGHGVGRVFHADPVILHF-RNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILT

Q54WU3 Methionine aminopeptidase 13.0e-2249.47Show/hide
Query:  HADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG-GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQ
        HA+K  F VV+ F GHG+GR+FH +P + H+  N   G M     FTIEPM+  G+    +W D+WT VT DG  SAQFEHT++IT+ G E+LT+
Subjt:  HADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG-GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQ

Q8IJP2 Methionine aminopeptidase 1b3.5e-2351.58Show/hide
Query:  HADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG-GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQ
        +  K  F VVR + GHGVG++FH++P + HF+ N   G M     FTIEPM+  G  + V+W D WT  T DG LSAQFEHT+LIT++G EILT+
Subjt:  HADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG-GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQ

Q9FV50 Methionine aminopeptidase 1D, chloroplastic/mitochondrial1.2e-4481.73Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     D ADKH++GVVRQFVGHGVG VFHADPV+LHFRNN+ GRMV NQTFTIEPMLT+GS NP+MWDDNWTVVTED SLSAQFEHTILIT DGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LT+C
Subjt:  LTQC

Q9FV52 Methionine aminopeptidase 1B, chloroplastic3.5e-3159.62Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI    S+HA+K  + VV +FVGHGVG VFH++P+I H+RN++ G MV  QTFTIEP+LT+G+   V W DNWT +T DG ++AQFEHTILIT  G+EI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LT+C
Subjt:  LTQC

Arabidopsis top hitse value%identityAlignment
AT1G13270.1 methionine aminopeptidase 1B2.5e-3259.62Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI    S+HA+K  + VV +FVGHGVG VFH++P+I H+RN++ G MV  QTFTIEP+LT+G+   V W DNWT +T DG ++AQFEHTILIT  G+EI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LT+C
Subjt:  LTQC

AT2G45240.1 methionine aminopeptidase 1A2.0e-2151.06Show/hide
Query:  HADKHRFGVVRQFVGHGVGRVFHADPVILHF-RNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILT
        HA      VVR + GHG+G +FH  P I H+ RN   G M + QTFTIEPM+  G      W D WT VT DG  SAQFEHT+L+T+ G E+LT
Subjt:  HADKHRFGVVRQFVGHGVGRVFHADPVILHF-RNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEILT

AT3G25740.1 methionine aminopeptidase 1C2.3e-2251.92Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG--GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGA
        K+I    S+HA K+ + + R F+GHGVG V H++P+I    N D     M+  QTFT+EP+LT+G+   V W D WT+VT DG  +AQFEHTILIT  GA
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDG--GRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGA

Query:  EILT
        EILT
Subjt:  EILT

AT4G37040.1 methionine aminopeptidase 1D8.8e-4681.73Show/hide
Query:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI
        KKI     D ADKH++GVVRQFVGHGVG VFHADPV+LHFRNN+ GRMV NQTFTIEPMLT+GS NP+MWDDNWTVVTED SLSAQFEHTILIT DGAEI
Subjt:  KKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVMWDDNWTVVTEDGSLSAQFEHTILITDDGAEI

Query:  LTQC
        LT+C
Subjt:  LTQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTGTTGAGCCTTTATGTGGAATGGAATACTTTGCCCGCATTGATTGGGGTGTTGGGTGTGGGCTCGCTATATTATCGAAATATGTCTTTGCTAGGTGGCTCTGG
AGATTCACGCAAGAAGAAAATCCCCTCTGGAAGAAGTGACCATGCAGATAAGCACCGATTTGGTGTAGTTCGACAGTTTGTTGGCCATGGCGTTGGACGTGTGTTTCATG
CTGATCCAGTTATTCTTCACTTCAGGAACAATGATGGTGGGCGCATGGTGTCGAATCAAACCTTTACAATTGAGCCAATGCTAACTATGGGTAGCATAAATCCTGTCATG
TGGGATGATAACTGGACTGTCGTAACAGAAGACGGAAGTCTGTCAGCACAATTTGAACATACCATCTTAATAACCGATGATGGAGCTGAGATATTAACGCAGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATTGTTGAGCCTTTATGTGGAATGGAATACTTTGCCCGCATTGATTGGGGTGTTGGGTGTGGGCTCGCTATATTATCGAAATATGTCTTTGCTAGGTGGCTCTGG
AGATTCACGCAAGAAGAAAATCCCCTCTGGAAGAAGTGACCATGCAGATAAGCACCGATTTGGTGTAGTTCGACAGTTTGTTGGCCATGGCGTTGGACGTGTGTTTCATG
CTGATCCAGTTATTCTTCACTTCAGGAACAATGATGGTGGGCGCATGGTGTCGAATCAAACCTTTACAATTGAGCCAATGCTAACTATGGGTAGCATAAATCCTGTCATG
TGGGATGATAACTGGACTGTCGTAACAGAAGACGGAAGTCTGTCAGCACAATTTGAACATACCATCTTAATAACCGATGATGGAGCTGAGATATTAACGCAGTGTTAAAC
AACGGTGGATCTCATGGCAAGACTTTGATATTCCAAATACAAGTATTTTTCTTATCCTGAAGCTCATATTCATTTATCACCGCCAAATGTATGTATCAAAAAACATGGAA
GTCATTTCTTGAGACAAACAGCTCTTGAATAATGTATTAAAAGTTTTTAAGCTTCAATTTAGTACTTCCTTCTTACAA
Protein sequenceShow/hide protein sequence
MTLLSLYVEWNTLPALIGVLGVGSLYYRNMSLLGGSGDSRKKKIPSGRSDHADKHRFGVVRQFVGHGVGRVFHADPVILHFRNNDGGRMVSNQTFTIEPMLTMGSINPVM
WDDNWTVVTEDGSLSAQFEHTILITDDGAEILTQC