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Carg27528 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27528
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIGR domain-containing protein
Genome locationCarg_Chr10:10115757..10118431
RNA-Seq ExpressionCarg27528
SyntenyCarg27528
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024026.1 hypothetical protein SDJN02_15055 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-42100Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISLA
        MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISLA
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISLA
KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3792.05Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQI SNHRS LQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
XP_022961412.1 uncharacterized protein LOC111461991 [Cucurbita moschata]2.7e-3995.45Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
XP_022968823.1 uncharacterized protein LOC111467943 [Cucurbita maxima]8.6e-3893.18Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQIISNHRS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
XP_023516779.1 uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo]2.3e-3894.32Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQIISNHRS LQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
TrEMBL top hitse value%identityAlignment
A0A0A0M1A4 IGR domain-containing protein2.3e-3687.5Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWR I+SNHRS LQPYSAPLFARFFSKS PY+VKVGIPEFL G+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
A0A1S3BPD9 uncharacterized protein LOC1034921086.7e-3687.5Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAW+ IISNHRS LQPYSA LFARFFSKS PY+VKVGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
A0A6J1DML5 uncharacterized protein LOC1110218233.0e-3689.77Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQI SN+RS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
A0A6J1HA49 uncharacterized protein LOC1114619911.3e-3995.45Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
A0A6J1HZ75 uncharacterized protein LOC1114679434.2e-3893.18Show/hide
Query:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAWRQIISNHRS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown1.6e-2157.61Show/hide
Query:  MAWRQIISNHRSKL---QPYSAPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAW ++I + R+ L   Q  S     RF  SK   Y VKVGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLGIPCKH  + L
Subjt:  MAWRQIISNHRSKL---QPYSAPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
AT5G26800.1 FUNCTIONS IN: molecular_function unknown4.4e-2463.04Show/hide
Query:  MAWRQIISNHRSKL--QPYSAPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL
        MAW ++I + RS L   P S+ L F RF+SKS  PY VKVGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK GIPCKH  + L
Subjt:  MAWRQIISNHRSKL--QPYSAPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTAAACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATACGTCGTGAAGGTCGG
GATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGC
TGAAAAAACTCGGAATTCCATGCAAACATGTAAGTATTTCCTTAGCCTGA
mRNA sequenceShow/hide mRNA sequence
TTTAAAAAAAATCTTTAAACCCTACCCGTCTTCATCTTCGTTGTTTCTTTCCATCTCCCATTTTTGCCACTCGCCGGAACGCCTCCACCACCACGCTGCTTCAGCCTCTC
ACTGTCACGCCAACTACTGTCTTCTGCTGCATTCCCTTCAGCTATTGTTCTCTCACCGTCGAGCAAGAAGGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTAAA
CTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATACGTCGTGAAGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGA
GTCACACGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGCTGAAAAAACTCGGAATTCCATGCAAACATGTAAGTATTT
CCTTAGCCTGA
Protein sequenceShow/hide protein sequence
MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHVSISLA