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Carg27531 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27531
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionABC1 domain-containing protein
Genome locationCarg_Chr20:4309622..4312935
RNA-Seq ExpressionCarg27531
SyntenyCarg27531
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1825166.1 unnamed protein product [Ananas comosus var. bracteatus]2.9e-2257.02Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL---------------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK
        + GLLETFYGVYEKDPD  + +          G  T +                            GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL---------------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK

Query:  GLDPRFDITEIAKP
        GLDPRFDITEIAKP
Subjt:  GLDPRFDITEIAKP

GER47583.1 protein kinase superfamily protein [Striga asiatica]6.6e-2260.61Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTG-------------------EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        + GLLE FYGVYEKD +  + +       + TG                   EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEI+KP
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTG-------------------EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

KAF8019093.1 hypothetical protein BT93_H3846 [Corymbia citriodora subsp. variegata]4.5e-2360Show/hide
Query:  QRGLLETFYGVYEKDPDSFVS---------SPAHGCCTLL---------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP
        + GLLETFYGVYEKDPD  ++           A    T L                      GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP
Subjt:  QRGLLETFYGVYEKDPDSFVS---------SPAHGCCTLL---------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP

Query:  RFDITEIAKP
        RFDITEIAKP
Subjt:  RFDITEIAKP

KAG7010932.1 hypothetical protein SDJN02_27730 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-44100Show/hide
Query:  MRAYQFKYQRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        MRAYQFKYQRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  MRAYQFKYQRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

XP_006483683.1 uncharacterized protein LOC102611013 [Citrus sinensis]5.0e-2294.64Show/hide
Query:  HGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        H CC LL GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  HGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

TrEMBL top hitse value%identityAlignment
A0A2P2MB51 Uncharacterized protein1.0e-2096.3Show/hide
Query:  CCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        C  LLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  CCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

A0A5A7QQF4 Protein kinase superfamily protein3.2e-2260.61Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTG-------------------EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        + GLLE FYGVYEKD +  + +       + TG                   EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEI+KP
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTG-------------------EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

A0A6P5GNM2 uncharacterized protein LOC109725478 isoform X11.3e-2050.36Show/hide
Query:  QRGLLETFYGVYEKDPD------------------------------SF------------VSSPAHGCCTLLT---------------GEDLLAIAADQ
        + GLLETFYGVYEKDPD                              SF            ++S   G    LT               GEDLLAIAADQ
Subjt:  QRGLLETFYGVYEKDPD------------------------------SF------------VSSPAHGCCTLLT---------------GEDLLAIAADQ

Query:  PFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        PFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  PFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

A0A6V7P3F4 ABC1 domain-containing protein1.4e-2257.02Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL---------------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK
        + GLLETFYGVYEKDPD  + +          G  T +                            GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL---------------------------TGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGK

Query:  GLDPRFDITEIAKP
        GLDPRFDITEIAKP
Subjt:  GLDPRFDITEIAKP

N1R5T2 ABC1 domain-containing protein3.2e-2252.85Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPA------------------------------HGCCTLL-------------TGEDLLAIAADQPFRFPATFTFVVRA
        + GLLE FYGVYEKDPD  + +                                H    +L             TGEDLLAIAADQPFRFPATFTFVVRA
Subjt:  QRGLLETFYGVYEKDPDSFVSSPA------------------------------HGCCTLL-------------TGEDLLAIAADQPFRFPATFTFVVRA

Query:  FSVLDGIGKGLDPRFDITEIAKP
        FSVLDGIGKGLDPRFDITEIAKP
Subjt:  FSVLDGIGKGLDPRFDITEIAKP

SwissProt top hitse value%identityAlignment
B9DGY1 Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic1.3e-1266.67Show/hide
Query:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        GEDL AI+ DQPFRFP+TFTFV+RAFS L+GIG  LDP F   ++A P
Subjt:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

P73121 Uncharacterized protein slr19192.9e-0438.3Show/hide
Query:  EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        +D   +  D PFR PA F  ++R+    +G+   LDP F I E+A P
Subjt:  EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

P73627 Uncharacterized protein sll17705.2e-1454.69Show/hide
Query:  DSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        D+F+  P          +DL  IA DQPFRFPATFTFV+RAFS L+G+GKGLDP F+   +A+P
Subjt:  DSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

Q55884 Uncharacterized protein sll00951.4e-0641.67Show/hide
Query:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        GE++ A+   QPFR P   TF++++ S LDGI + LDPR+++   ++P
Subjt:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

Q93Y08 Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic6.8e-2246.04Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA
        + GLLE FYGVYEKDPD  + +          G  T +                                                     GEDLLAIAA
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA

Query:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

Arabidopsis top hitse value%identityAlignment
AT3G07700.1 Protein kinase superfamily protein9.2e-1466.67Show/hide
Query:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        GEDL AI+ DQPFRFP+TFTFV+RAFS L+GIG  LDP F   ++A P
Subjt:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

AT3G07700.2 Protein kinase superfamily protein9.2e-1466.67Show/hide
Query:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        GEDL AI+ DQPFRFP+TFTFV+RAFS L+GIG  LDP F   ++A P
Subjt:  GEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

AT3G07700.3 Protein kinase superfamily protein1.0e-1263.83Show/hide
Query:  EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        +DL AI+ DQPFRFP+TFTFV+RAFS L+GIG  LDP F   ++A P
Subjt:  EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

AT5G64940.1 ABC2 homolog 134.8e-2346.04Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA
        + GLLE FYGVYEKDPD  + +          G  T +                                                     GEDLLAIAA
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA

Query:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP

AT5G64940.2 ABC2 homolog 134.8e-2346.04Show/hide
Query:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA
        + GLLE FYGVYEKDPD  + +          G  T +                                                     GEDLLAIAA
Subjt:  QRGLLETFYGVYEKDPDSFVSSPAH-------GCCTLL----------------------------------------------------TGEDLLAIAA

Query:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
        DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP
Subjt:  DQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCATATCAGTTCAAATATCAGAGAGGGTTGCTAGAAACGTTCTATGGAGTGTATGAGAAAGATCCGGACAGCTTTGTGTCGAGTCCCGCTCATGGTTGTTGCAC
TCTCCTAACAGGAGAAGATCTATTAGCCATTGCAGCAGACCAACCATTTCGGTTTCCTGCCACATTCACATTTGTTGTTAGAGCATTTTCAGTATTAGATGGCATTGGGA
AAGGCCTCGACCCACGATTTGATATTACTGAAATTGCCAAACCGTGA
mRNA sequenceShow/hide mRNA sequence
GAAATATGATTACACCAAGGAAGCGCTAATGCGAGCATATCAGTTCAAATATCAGAGAGGGTTGCTAGAAACGTTCTATGGAGTGTATGAGAAAGATCCGGACAGCTTTG
TGTCGAGTCCCGCTCATGGTTGTTGCACTCTCCTAACAGGAGAAGATCTATTAGCCATTGCAGCAGACCAACCATTTCGGTTTCCTGCCACATTCACATTTGTTGTTAGA
GCATTTTCAGTATTAGATGGCATTGGGAAAGGCCTCGACCCACGATTTGATATTACTGAAATTGCCAAACCGTGA
Protein sequenceShow/hide protein sequence
MRAYQFKYQRGLLETFYGVYEKDPDSFVSSPAHGCCTLLTGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKP