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Carg27546 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27546
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:8008693..8010102
RNA-Seq ExpressionCarg27546
SyntenyCarg27546
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607652.1 hypothetical protein SDJN03_00994, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4798.97Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVF AFSIGVGVPIYAVMFQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

KAG7037254.1 hypothetical protein SDJN02_00877, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-47100Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

XP_022926198.1 uncharacterized protein LOC111433382 [Cucurbita moschata]1.9e-4697.94Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRG HSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVF AFSIGVGVPIYAVMFQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

XP_022981661.1 uncharacterized protein LOC111480717 [Cucurbita maxima]5.5e-4696.91Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRGFHST VKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVF AFSIGVGVPIYAV+FQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

XP_038899385.1 uncharacterized protein LOC120086696 [Benincasa hispida]6.3e-4289.69Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MS  NGVKSCAKL+KSSE LL+KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKL+M LGVF AFSIGV VPIYAV+FQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

TrEMBL top hitse value%identityAlignment
A0A0A0LQ20 Uncharacterized protein8.9e-4289.69Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MS  NGVKSCAKL+KSSEPLL KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMK QKL+M LGV  AFSIGVGVPIYAV+FQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

A0A1S3B3R2 uncharacterized protein LOC1034854306.8e-4289.58Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTAS
        MS GNG+KSCAKL+KSSEPLL+KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMK QKL+M LGV  AFSIGVGVPIYAV+FQQKKTAS
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTAS

A0A6J1CR70 uncharacterized protein LOC1110134982.2e-4086.6Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MS  NGVKS AKL++SSE LL+KSANRGFHSTG KRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKL+M LGVF AFSIGV VPIYAV+FQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

A0A6J1EHC8 uncharacterized protein LOC1114333829.2e-4797.94Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRG HSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVF AFSIGVGVPIYAVMFQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

A0A6J1J2Q3 uncharacterized protein LOC1114807172.7e-4696.91Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        MSFGNGVKSCAKLVKSSEPLLLKSANRGFHST VKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVF AFSIGVGVPIYAV+FQQKKTASG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72020.1 unknown protein2.2e-2961.86Show/hide
Query:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG
        M+    ++S +K++ SSE  + +S  R FHSTGVK+M G  HG  + YYLHAKHMYNLDRMK Q L M LGVF AFSIGVGVPI+AV+FQQ+KT SG
Subjt:  MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCGGCAATGGAGTGAAATCCTGTGCAAAGCTGGTGAAGTCTTCAGAACCATTGTTGTTGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAAT
GGGTGGACATGCACATGGACACGATGAACCCTACTATTTGCACGCAAAGCACATGTACAACTTGGATAGGATGAAAAATCAGAAGTTGAGCATGAGGCTTGGAGTTTTCG
CTGCATTCAGCATAGGTGTGGGCGTTCCAATCTATGCAGTGATGTTTCAGCAAAAGAAGACGGCCTCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTCGGCAATGGAGTGAAATCCTGTGCAAAGCTGGTGAAGTCTTCAGAACCATTGTTGTTGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAAT
GGGTGGACATGCACATGGACACGATGAACCCTACTATTTGCACGCAAAGCACATGTACAACTTGGATAGGATGAAAAATCAGAAGTTGAGCATGAGGCTTGGAGTTTTCG
CTGCATTCAGCATAGGTGTGGGCGTTCCAATCTATGCAGTGATGTTTCAGCAAAAGAAGACGGCCTCTGGATGA
Protein sequenceShow/hide protein sequence
MSFGNGVKSCAKLVKSSEPLLLKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKNQKLSMRLGVFAAFSIGVGVPIYAVMFQQKKTASG